EY659242

Overview
NameEY659242
Unique NameEY659242
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length942
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7428 contig Csv1_Contig7428:165..1107. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659242 vs. ExPASy Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 1.144e-41
Identity = 76/137 (55.47%), Postives = 103/137 (75.18%), Query Frame = 1
Query:  112 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELINRAN 522
            N+ SGM V D  K  F EL+ K+ +R+++FKID           G P E+Y+DF +++P+++CRYAVYDFD+ T +NCQKSKIFFIAWSP TSR+R+KMLYA+SKDRF+RE++GI  E+QATDP+EM L+ +  R N
Sbjct:    3 NSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIKGRLN 139          
BLAST of EY659242 vs. ExPASy Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.548e-41
Identity = 78/136 (57.35%), Postives = 102/136 (75.00%), Query Frame = 1
Query:  112 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELINRA 519
            N+ SGM V D  K  F EL+ K+  R+++FKI+           G P ESY+DF A LP ++CRYAV+DFD+VT ENCQKSKIFFI+W+P TSR+R+KMLYA+SKDRF+RELDGI  E+QATDP+EM ++ + +RA
Sbjct:    3 NSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSRA 138          
BLAST of EY659242 vs. ExPASy Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.327e-41
Identity = 80/136 (58.82%), Postives = 101/136 (74.26%), Query Frame = 1
Query:  112 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELINRA 519
            NA SGM V D  K  F EL+ K+ +R++I+KI+           G P ESYEDF A LP ++CRYAVYDFD++T EN QKS+IFFIAWSP T+R+R+KM+YA+SKDRF+RELDGI  E+QATDPTEM L+   +RA
Sbjct:    3 NAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLPADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFRSRA 138          
BLAST of EY659242 vs. ExPASy Swiss-Prot
Match: ADF5_ORYSJ (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica GN=ADF5 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.412e-41
Identity = 79/135 (58.52%), Postives = 98/135 (72.59%), Query Frame = 1
Query:  115 ATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELINRA 519
            AT GM V +  +  F E++ KKVHR+V++KID           GGP E YE+  AALP +DCRYAV+DFD+VT +NCQKSKIFFIAWSP+ SRIRAK+LYATSK   RR LDG+HYE+QATD +EM  + +  RA
Sbjct:    8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQATDSSEMGYDVIRGRA 142          
BLAST of EY659242 vs. ExPASy Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.681e-41
Identity = 78/136 (57.35%), Postives = 101/136 (74.26%), Query Frame = 1
Query:  112 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELINRA 519
            N++SGM V D  K  F EL+ K+  R+++FKI+           G P ESY+DF   LP N+CRYAV+DFD+VT ENCQKSKIFFI+WSP TSR+R+KMLYA++KDRF+RELDGI  E+QATDP+EM ++ +  RA
Sbjct:    3 NSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLPPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVELQATDPSEMSMDIIKARA 138          
BLAST of EY659242 vs. ExPASy Swiss-Prot
Match: ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.264e-40
Identity = 79/136 (58.09%), Postives = 102/136 (75.00%), Query Frame = 1
Query:  112 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELINRA 519
            NA SGM V D  K  F EL+ K+ +R++IF+ID           G P E+Y+DF A+LP N+CRYAV+DFD++T ENCQKSKIFFIAWSP +SR+R KM+YA+SKDRF+RELDGI  E+QATDP+EM  + + +RA
Sbjct:    3 NAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKL--GNPDETYDDFTASLPANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 136          
BLAST of EY659242 vs. ExPASy Swiss-Prot
Match: ADF5_ARATH (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana GN=ADF5 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.651e-40
Identity = 78/135 (57.78%), Postives = 100/135 (74.07%), Query Frame = 1
Query:  115 ATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELINRA 519
            AT+GM V D   ++F +++ KKVHRY++FKI+           GG  ESY D   +LP +DCRYAV+DFD+VT +NC+KSKIFFIAWSP  S+IRAK+LYATSKD  RR L+GIHYE+QATDPTEM  + + +RA
Sbjct:    8 ATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQDRA 142          
BLAST of EY659242 vs. ExPASy Swiss-Prot
Match: ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.817e-40
Identity = 76/136 (55.88%), Postives = 101/136 (74.26%), Query Frame = 1
Query:  112 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELINRA 519
            N+ SGM V D  K  F EL+ K+  R++ FKID           G P ++Y+DF A++P ++CRYAV+DFD+VT ENCQKSKIFFI+WSP TS++R+KMLYA+SKDRF+RELDGI  E+QATDP+EM ++ +  RA
Sbjct:    3 NSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMPASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKARA 138          
BLAST of EY659242 vs. ExPASy Swiss-Prot
Match: ADF2_ARATH (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.817e-40
Identity = 79/137 (57.66%), Postives = 101/137 (73.72%), Query Frame = 1
Query:  112 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELINRAN 522
            NA SGM V D  K  F EL+ K+  R +++KI+           G P +SY+DFAA+LP +DCRY +YDFD+VT+ENCQKSKIFFIAWSP T+++R KM+YA+SKDRF+RELDGI  E+QATDPTEM L+   +R N
Sbjct:    3 NAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQVIVEKL--GEPEQSYDDFAASLPADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN 137          
BLAST of EY659242 vs. ExPASy Swiss-Prot
Match: ADF9_ORYSJ (Actin-depolymerizing factor 9 OS=Oryza sativa subsp. japonica GN=ADF9 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.679e-40
Identity = 80/137 (58.39%), Postives = 99/137 (72.26%), Query Frame = 1
Query:  112 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELINRAN 522
            N+ SG+ V D  K  F EL+ ++  R+++FKID           G  AE YEDFAA LP ++CRYAVYD D+VT ENCQKSKIFF +WSP T+R R+KMLYA+SKDRFRRELDGI  EIQATDP+EM L+ +  RA+
Sbjct:    3 NSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLPADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIIRARAH 139          
The following BLAST results are available for this feature:
BLAST of EY659242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
ADF8_ARATH1.144e-4155.47Actin-depolymerizing factor 8 OS=Arabidopsis thali... [more]
ADF1_ORYSJ2.548e-4157.35Actin-depolymerizing factor 1 OS=Oryza sativa subs... [more]
ADF2_PETHY3.327e-4158.82Actin-depolymerizing factor 2 OS=Petunia hybrida G... [more]
ADF5_ORYSJ7.412e-4158.52Actin-depolymerizing factor 5 OS=Oryza sativa subs... [more]
ADF_LILLO9.681e-4157.35Actin-depolymerizing factor OS=Lilium longiflorum ... [more]
ADF7_ARATH1.264e-4058.09Actin-depolymerizing factor 7 OS=Arabidopsis thali... [more]
ADF5_ARATH1.651e-4057.78Actin-depolymerizing factor 5 OS=Arabidopsis thali... [more]
ADF6_ORYSJ2.817e-4055.88Actin-depolymerizing factor 6 OS=Oryza sativa subs... [more]
ADF2_ARATH2.817e-4057.66Actin-depolymerizing factor 2 OS=Arabidopsis thali... [more]
ADF9_ORYSJ3.679e-4058.39Actin-depolymerizing factor 9 OS=Oryza sativa subs... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-H12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659242 ID=EY659242; Name=EY659242; organism=Citrus sinensis; type=EST; length=942bp
TCGGTGCCGGNATTCAAAGGCGTGACCCACGCGTCCGGTTTATTTTCTTG
CTCTGGTGATCTGCGTTCTGCCGCTGCCGCCGCCATGTCTTTCAGAGGAC
TAAGTCGACCAAATGCCACTTCTGGCATGGGCGTTGCTGATCACAGCAAA
AATGCATTCACGGAATTGCAAAGGAAGAAGGTTCACCGTTATGTGATTTT
TAAGATTGATGAGAAGAAAAAGGAGGTTGTGGTTGAGAAGACTGGTGGCC
CCGCTGAGAGCTACGAGGATTTCGCTGCTGCTTTGCCTGAGAATGATTGT
CGATATGCTGTATATGACTTTGACTATGTGACTTCTGAGAATTGTCAGAA
GAGCAAGATATTCTTCATTGCATGGTCCCCTTCAACCTCTAGAATCCGTG
CCAAGATGCTGTACGCCACATCTAAAGACAGATTTCGACGGGAGCTGGAT
GGTATCCACTATGAGATTCAGGCTACTGATCCTACAGAGATGGATCTTGA
AGAGCTTATAAACCGTGCAAACTGAAGAGTCTGCAGTTTTGCAGTTTCTT
CCTTCCATGAAAAAAAAATCAGCAAGGGGTTCTGCCAACTGTTGCTCCTT
GCTTCATTAATCTATGTGCAAAAATCTATGCGTAATCTTCGAATAACTGG
CAATGTGGGAAGACTGAATGCGCTGAGGCTATCTTGCTGCGGTGAAATTA
GCTTCCCAGTGGTTTATTGCTACTCTGATGAATATAAGATGGTTCGCTGG
GTATTTGGGAATCCTANAACATATTATCGTACCATTGATCTCTATTCATA
TTCGCTGGCCTTGTACTTCTCCTCGATCTATTTCTATATGCGAAAGTGGC
CACGACACATACAAATGAAGGCACACTTCTTATTAAAAAACAAAAAAAAT
GGCGGCCGCTTAAAGAACCAGCTTCATCCCGTGCTGCAACTT
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