EY659216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_STAAR (30S ribosomal protein S1 OS=Staphylococcus aureus (strain MRSA252) GN=rpsA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15 Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 E+D E +R++LS RKA+ + L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G +KV I S DR+ R+SLS K PTP + I+ Sbjct: 160 ELDPENNRVILS-RKAVEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIK 273
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_STAAN (30S ribosomal protein S1 OS=Staphylococcus aureus (strain N315) GN=rpsA PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15 Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 E+D E +R++LS RKA+ + L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G +KV I S DR+ R+SLS K PTP + I+ Sbjct: 160 ELDPENNRVILS-RKAVEQEENDAKKDQLLQSLNEGDVIHGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIK 273
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_STAAM (30S ribosomal protein S1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rpsA PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15 Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 E+D E +R++LS RKA+ + L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G +KV I S DR+ R+SLS K PTP + I+ Sbjct: 160 ELDPENNRVILS-RKAVEQEENDAKKDQLLQSLNEGDVIHGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIK 273
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_STAAC (30S ribosomal protein S1 OS=Staphylococcus aureus (strain COL) GN=rpsA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15 Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 E+D E +R++LS RKA+ + L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G +KV I S DR+ R+SLS K PTP + I+ Sbjct: 160 ELDPENNRVILS-RKAVEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIK 273
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RR1_PORPU (30S ribosomal protein S1, chloroplastic OS=Porphyra purpurea GN=rps1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 37/98 (37.76%), Postives = 68/98 (69.39%), Query Frame = 1 Query: 52 VDEEQSRLVLSNRKAM-ADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE 342 V+E+ + L+LS+R+A+ A + + L +G+++ G + + PYG FI G + GL+H+S+I+ +V I + + GDT+K +I+ D+++GR+SLS K L+ Sbjct: 166 VEEKSNNLILSHRRALIAQASSNLIVGNIIEGVINQITPYGLFIKAGNLKGLVHISEINVKQVERIPSQFKIGDTIKAVIIHVDKKQGRLSLSMKHLK 263
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RR1_PORYE (30S ribosomal protein S1, chloroplastic OS=Porphyra yezoensis GN=rps1 PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14 Identity = 35/97 (36.08%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 52 VDEEQSRLVLSNRKAM-ADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKL 339 V+E+ + L+LS+R+A+ + + + L +G+++ G + + PYG FI +G + GL+H+S+I+ + I++ + GDT+K +I+ D+++GR+SLS K L Sbjct: 166 VEEKSNNLILSHRRALISQASSNLIVGNIIEGIINQITPYGLFIKVGNLKGLVHISEINIKNLEQISSQFKIGDTIKAVIIHVDKKQGRLSLSMKHL 262
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_STAS1 (30S ribosomal protein S1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rpsA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.884e-14 Identity = 43/114 (37.72%), Postives = 67/114 (58.77%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 E+D +R++LS + A A+ L G V+ G V L +GAF+DIGG++GL+HVS++SH+ V V+ G+T+ V I S D++ R+SLS K P+P + I+ Sbjct: 160 ELDPANNRVILSRKAVEALENAEKKDELLESLNEGDVIEGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVKSPEDVVSIGETVNVKIKSVDKDSERISLSIKDTLPSPFESIK 273
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_STAEQ (30S ribosomal protein S1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rpsA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.884e-14 Identity = 46/115 (40.00%), Postives = 69/115 (60.00%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAM---------ADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 E+D E +R++LS RKA+ A L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G+ +KV + S +++ R+SLS K PTP + I+ Sbjct: 160 ELDPENNRVILS-RKAVEQLENDAKKASILDSLNEGDVIDGKVARLTNFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSVGEAVKVKVKSVEKDSERISLSIKDTLPTPFENIK 273
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_STAHJ (30S ribosomal protein S1 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rpsA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13 Identity = 43/115 (37.39%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 E+D E +R++LS RKA+ ++ L G V+ G V L +GAF+DIGG++GL+HVS++SH+ V V+ G + V + S +++ R+SLS K PTP + I+ Sbjct: 160 ELDPENNRVILS-RKAVEQAENDVKKASLLESLNAGDVIKGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVDSPEDVVSVGQEVDVKVKSVEKDAERISLSIKDTLPTPFESIK 273
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_RHIME (30S ribosomal protein S1 OS=Rhizobium meliloti GN=rpsA PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13 Identity = 42/113 (37.17%), Postives = 69/113 (61.06%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 363 ++D+ + +V+S R + +S+A+ L G VV G V+++ YGAF+D+GGI+GLLHV+ ++ RV + +L G +KV I+ ++E R+SL K+LE P D I Sbjct: 164 KMDKRRGNIVVSRRTVLEESRAEQRSEIVQNLEEGQVVEGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEILNIGQQVKVQIIRINQETHRISLGMKQLESDPWDGI 276 The following BLAST results are available for this feature:
BLAST of EY659216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659216 ID=EY659216; Name=EY659216; organism=Citrus sinensis; type=EST; length=713bpback to top |