EY659216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_MYCTU (30S ribosomal protein S1 OS=Mycobacterium tuberculosis GN=rpsA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.500e-12 Identity = 39/109 (35.78%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 E+D+ ++ +VLS R + +Q++ L G++ G V S+ +GAF+D+GG++GL+HVS++S + + V+Q GD + V +L D +R RVSLS K + P Sbjct: 175 ELDKNRNNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDP 283
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_ECOLI (30S ribosomal protein S1 OS=Escherichia coli (strain K12) GN=rpsA PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.500e-12 Identity = 38/109 (34.86%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 ++D++++ +V+S R + + L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V +L DRER RVSL K+L P Sbjct: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_ECOL6 (30S ribosomal protein S1 OS=Escherichia coli O6 GN=rpsA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.500e-12 Identity = 38/109 (34.86%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 ++D++++ +V+S R + + L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V +L DRER RVSL K+L P Sbjct: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_ECO57 (30S ribosomal protein S1 OS=Escherichia coli O157:H7 GN=rpsA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.500e-12 Identity = 38/109 (34.86%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 ++D++++ +V+S R + + L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V +L DRER RVSL K+L P Sbjct: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_BUCAP (30S ribosomal protein S1 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rpsA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.500e-12 Identity = 39/115 (33.91%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRN 369 ++D++++ +V+S R + + L G + G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V IL D+ER RVSL K+L P I N Sbjct: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLESLQEGIEIKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEINVKILKFDKERTRVSLGLKQLGEDPWIAISN 272
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_BUCAI (30S ribosomal protein S1 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpsA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.500e-12 Identity = 38/109 (34.86%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 ++D++++ +V+S R + + L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + + IL DRER RVSL K+L P Sbjct: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMHVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEINIKILKFDRERTRVSLGLKQLGEDP 266
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_RICTY (30S ribosomal protein S1 OS=Rickettsia typhi GN=rpsA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.571e-12 Identity = 37/113 (32.74%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 52 VDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 +D++ +V+S R + +S+++ + G ++ G V+++ YGAFID+G ++GLLH++ IS RV + VL+ +KVM++ D + R+SL K+L+ P D I+ Sbjct: 172 MDKKLGNIVVSRRVILEESRSEARDEMLSKIKEGMILEGVVKNITDYGAFIDLGSVDGLLHLTDISWGRVNHPSEVLEFNQKVKVMVIKFDEKTKRISLGIKQLDSNPWDAIK 284
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_RICPR (30S ribosomal protein S1 OS=Rickettsia prowazekii GN=rpsA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.571e-12 Identity = 38/113 (33.63%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 52 VDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 +D++ +V+S R + +S+++ + G V+ G V+++ YGAFID+G ++GLLH++ IS RV + VL+ +KVM++ D + R+SL K+L+ P D I+ Sbjct: 172 MDKKLGNIVVSRRVILEESRSEARDEMLSKIKEGIVLEGVVKNITDYGAFIDLGSVDGLLHLTDISWGRVNHPSEVLEFNQKVKVMVIKFDEKTKRISLGIKQLDSNPWDAIK 284
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_MYCLE (30S ribosomal protein S1 OS=Mycobacterium leprae GN=rpsA PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.970e-12 Identity = 39/109 (35.78%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 49 EVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 E+D+ ++ +VLS R + +Q+ QL G++ G V S+ +GAF+D+GG++GL+HVS++S + + V+Q G+ + V +L D +R RVSLS K + P Sbjct: 175 ELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVGNEVTVEVLDVDMDRERVSLSLKATQEDP 283
BLAST of EY659216 vs. ExPASy Swiss-Prot
Match: RS1_RICBR (30S ribosomal protein S1 OS=Rickettsia bellii (strain RML369-C) GN=rpsA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.798e-12 Identity = 37/113 (32.74%), Postives = 69/113 (61.06%), Query Frame = 1 Query: 52 VDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 +D++ +V+S R + +S+++ + G ++ GTV+++ YGAFID+G ++GLLH++ IS RV + VL+ +KVM++ + E R+SL K+L+ P + I+ Sbjct: 175 MDKKLGNIVVSRRAILEESRSEARDEMLSKIKEGMILEGTVKNITDYGAFIDLGSVDGLLHLTDISWARVNHPSEVLEFNQKVKVMVIKFNEETKRISLGMKQLDYNPWEKIK 287 The following BLAST results are available for this feature:
BLAST of EY659216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659216 ID=EY659216; Name=EY659216; organism=Citrus sinensis; type=EST; length=713bpback to top |