EY659208

Overview
NameEY659208
Unique NameEY659208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC11_ARATH (Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.536e-48
Identity = 83/152 (54.61%), Postives = 111/152 (73.03%), Query Frame = 3
Query:   42 ILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVIFQSEECLIRFPTTQRRS 497
            + C    F     V +  + Y+FD++++N++R+C+ K I+TVNG FPGP + AREGDR+II V NHV  N+SIHWHG++Q ++GWADGPAYITQCPI TGQSY+Y+F +TGQRGTL+WHAH  W+RATVYG +VI  +      FP   + S
Sbjct:    8 LFCYLLAFLGYSPVDAAVKKYQFDVQVKNISRICNAKPIVTVNGMFPGPTVYAREGDRVIINVTNHVQYNMSIHWHGLKQYRNGWADGPAYITQCPIQTGQSYLYDFNVTGQRGTLWWHAHILWLRATVYGAIVILPAPGKPYPFPQPYQES 159          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC10_ARATH (Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.877e-48
Identity = 93/186 (50.00%), Postives = 122/186 (65.59%), Query Frame = 3
Query:   18 LFFRHRSAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVIFQSEECLIRFPTTQRRSYHL----WRSG*CGSRCIINQSLQTG 563
            + F  R  +L     FPA   V    R Y F++  + VTR+C TK I+TVNG+FPGP I A E D +++ VVN+V  N+SIHWHGIRQL++GWADGPAYITQCPI  G SYVYNFT+TGQRGTL+WHAH  W+RATV+G +VI         FP   R    +    W+S    +  ++N++L++G
Sbjct:    1 MVFPIRILVLFALLAFPA--CVHGAIRKYTFNVVTKQVTRICSTKQIVTVNGKFPGPTIYANEDDTILVNVVNNVKYNVSIHWHGIRQLRTGWADGPAYITQCPIKPGHSYVYNFTVTGQRGTLWWHAHVLWLRATVHGAIVILPKLGLPYPFPKPHREEVIILGEWWKS---DTETVVNEALKSG 181          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC2_ORYSJ (Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.258e-45
Identity = 77/128 (60.16%), Postives = 103/128 (80.47%), Query Frame = 3
Query:   96 RHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVIFQSEECLIRFP 479
            + Y+FDI M NV+RLCH K+++TVNG +PGP I AREGDR+I+ V NHV +N++IHWHG++Q ++GWADGPAY+TQCPI +G SYVY+F +T QRGTL+WHAH +W+RATV+G +VI  +      FP
Sbjct:   29 KRYQFDIVMSNVSRLCHEKAMVTVNGSYPGPTIYAREGDRVIVNVTNHVKHNMTIHWHGLKQRRNGWADGPAYVTQCPIGSGGSYVYDFNVTRQRGTLWWHAHIAWMRATVHGAIVILPAAGVPYPFP 156          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC5_ARATH (Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.694e-45
Identity = 77/141 (54.61%), Postives = 101/141 (71.63%), Query Frame = 3
Query:   39 AILC----VWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVIF 449
            ++LC    V FL  + +A A+   H++F I+   V RLC T + ITVNG FPGP +V   GD L++KV+N    NI+IHWHG+RQ+++GWADGP ++TQCPI  G SY Y FTI GQ GTL+WHAH SW+RATVYG L++F
Sbjct:    6 SLLCFISFVAFLLFSSVAEANKAHHHEFIIQATKVKRLCETHNSITVNGMFPGPMLVVNNGDTLVVKVINRARYNITIHWHGVRQMRTGWADGPEFVTQCPIRPGSSYTYRFTIQGQEGTLWWHAHSSWLRATVYGSLLVF 146          

HSP 2 Score: 25.7942 bits (55), Expect = 7.694e-45
Identity = 11/31 (35.48%), Postives = 19/31 (61.29%), Query Frame = 1
Query:  439 LSFSKARSALSVSQPHKEGPIIFGEVVNADP 531
            L F  A S+   ++PH+  P++ GE  +A+P
Sbjct:  144 LVFPPAGSSYPFTKPHRNVPLLLGEWWDANP 174          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC6_ARATH (Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.087e-43
Identity = 70/123 (56.91%), Postives = 94/123 (76.42%), Query Frame = 3
Query:   81 VASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVIF 449
            + + TR Y+F ++   +TRLC T  I+TVN +FPGP I A+E DR++IKV+N  P N +IHWHGI+Q +S W DGP+YITQCPI +GQS+ YNF +  Q+GT  WHAH SW+RATVYGPL+++
Sbjct:   27 IGAATRFYQFKVQTIRLTRLCQTNEIVTVNKKFPGPAISAQEDDRIVIKVINMTPYNTTIHWHGIKQKRSCWYDGPSYITQCPIQSGQSFTYNFKVAQQKGTFLWHAHFSWLRATVYGPLIVY 149          

HSP 2 Score: 26.1794 bits (56), Expect = 1.087e-43
Identity = 17/52 (32.69%), Postives = 24/52 (46.15%), Query Frame = 2
Query:  446 FPKRGVPYPF--PNHTKKVLSSLEKWLMRIPMHYQPISTNRSGPNVSDPFPI 595
            +PK  VPYPF  P +   +L   E WL  +    Q +  +   P  +D F I
Sbjct:  149 YPKASVPYPFKKPFNEHTILLG-EYWLKNVVELEQHVLESGGPPPPADAFTI 199          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC1_ARATH (Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.899e-42
Identity = 72/122 (59.02%), Postives = 93/122 (76.23%), Query Frame = 3
Query:   84 ASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVIF 449
            AS TR + F+++ + VTRLCHTK ++TVNGQ+PGP +   EGD + IKV N + +N +IHWHG+RQ ++GWADGPAYITQCPI + QSY Y F +  QRGTL WHAH SW RA+VYG  +I+
Sbjct:   25 ASTTRRFHFNVEWKKVTRLCHTKQLLTVNGQYPGPTVAVHEGDIVEIKVTNRIAHNTTIHWHGLRQYRTGWADGPAYITQCPIRSKQSYTYRFKVEDQRGTLLWHAHHSWQRASVYGAFIIY 146          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC12_ARATH (Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.787e-42
Identity = 85/180 (47.22%), Postives = 114/180 (63.33%), Query Frame = 3
Query:   36 SAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVIFQSEECLIRFPTTQRRSYHL----WRSG*CGSRCIINQSLQTG 563
            S +L    LF A L +A + +H+ F I+   V RLC T++ ITVNG FPGP +    GD L +KV N    NI+IHWHG+RQ+++GWADGP ++TQCPI  G+SY Y FTI GQ GTL+WHAH SW+RATVYG L+I  +      FP   R++  +    W +       +INQ+ +TG
Sbjct:    8 SILLFFCSLFSASLIIAKV-QHHDFVIQETPVKRLCKTRNAITVNGMFPGPTLEVNNGDTLEVKVHNRARYNITIHWHGVRQIRTGWADGPEFVTQCPIRPGKSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPTPGSSFPFPKPDRQTALMLGEWWNANPVD---VINQATRTG 183          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC3_ORYSJ (Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.510e-42
Identity = 72/124 (58.06%), Postives = 91/124 (73.39%), Query Frame = 3
Query:   75 LAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVI 446
            L   +   H++F ++   V RLC T ++ITVNGQ PGP +  REGD ++I VVNH   N++IHWHGIRQ ++GWADGP ++TQCPI  G SY Y FTI GQ GTL+WHAH SW+RATVYG L+I
Sbjct:   20 LLAGAEVHHHEFIVQETPVKRLCKTHNVITVNGQLPGPTLEVREGDTVVINVVNHAQYNVTIHWHGIRQFRTGWADGPEFVTQCPIKPGGSYKYRFTIEGQEGTLWWHAHSSWLRATVYGALII 143          

HSP 2 Score: 22.3274 bits (46), Expect = 7.510e-42
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  478 QPHKEGPIIFGEVVNADP 531
            +P +E P+I GE  +ADP
Sbjct:  155 KPAREVPLILGEWWDADP 172          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC3_ARATH (Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 6.239e-41
Identity = 74/124 (59.68%), Postives = 87/124 (70.16%), Query Frame = 3
Query:   81 VASITRH-YKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVIF 449
            +AS   H ++F I    V RLC T   ITVNGQ+PGP +V R GD L I V+N    NISIHWHGIRQL++ WADGP YITQCPI  GQ+Y Y F I  Q GTL+WHAH  W+RATVYG L+I+
Sbjct:   22 LASAEHHVHQFVITPTPVKRLCRTHQSITVNGQYPGPTLVVRNGDSLAITVINRARYNISIHWHGIRQLRNPWADGPEYITQCPIRPGQTYTYRFKIEDQEGTLWWHAHSRWLRATVYGALIIY 145          

HSP 2 Score: 28.1054 bits (61), Expect = 6.239e-41
Identity = 16/51 (31.37%), Postives = 24/51 (47.06%), Query Frame = 2
Query:  446 FPKRGVPYPFPNHTKKVLSSLEKWLMRIPMH-YQPISTNRSGPNVSDPFPI 595
            +P+ G PYPF    + +   L +W  R PM   +      +  NVSD + I
Sbjct:  145 YPRLGSPYPFSMPKRDIPILLGEWWDRNPMDVLKQAQFTGAAANVSDAYTI 195          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC23_ORYSJ (Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.297e-39
Identity = 71/133 (53.38%), Postives = 98/133 (73.68%), Query Frame = 3
Query:   54 WFLFPAGLA--VASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVI 446
            W L  A L    A+  ++++F I+   V RLC ++SI+TVNGQFPGP +  +EGD LII ++N    N+++HWHG+RQ+++GW+DGP Y+TQCP+  GQSY Y FT+  Q GTL+WHAH SW+RATVYG L+I
Sbjct:    9 WLLSLALLCSLAAAKEQYHEFVIRETTVKRLCKSQSIMTVNGQFPGPTLEIKEGDSLIINLINRGRYNVTLHWHGVRQMRTGWSDGPEYVTQCPVRPGQSYRYRFTVAAQEGTLWWHAHSSWLRATVYGALLI 141          
The following BLAST results are available for this feature:
BLAST of EY659208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
LAC11_ARATH3.536e-4854.61Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 S... [more]
LAC10_ARATH7.877e-4850.00Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 S... [more]
LAC2_ORYSJ1.258e-4560.16Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 ... [more]
LAC5_ARATH7.694e-4554.61Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=... [more]
LAC6_ARATH1.087e-4356.91Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=... [more]
LAC1_ARATH2.899e-4259.02Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=... [more]
LAC12_ARATH3.787e-4247.22Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 S... [more]
LAC3_ORYSJ7.510e-4258.06Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 ... [more]
LAC3_ARATH6.239e-4159.68Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=... [more]
LAC23_ORYSJ2.297e-3953.38Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC2... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659208 ID=EY659208; Name=EY659208; organism=Citrus sinensis; type=EST; length=917bp
CGGACGCGTGGGTGCTTCTCTTCTTCCGTCATCGCTCAGCAATTTTGTGC
GTTTGGTTTCTCTTTCCTGCTGGCCTTGCTGTAGCCAGCATTACAAGGCA
CTACAAGTTTGATATTAAGATGCAAAATGTGACACGACTGTGCCACACCA
AAAGCATAATCACAGTAAATGGACAGTTTCCAGGGCCCCGCATTGTTGCC
AGAGAGGGTGATCGTCTTATTATCAAAGTGGTTAATCATGTCCCAAACAA
CATCTCCATCCATTGGCATGGGATTCGACAGCTACAGAGTGGATGGGCTG
ATGGGCCTGCCTACATAACTCAATGCCCTATACATACTGGCCAGAGTTAT
GTATACAATTTCACAATTACAGGACAAAGAGGGACCCTGTTTTGGCATGC
TCATATNTCTTGGATACGAGCGACTGTGTATGGGCCCCTTGTCATTTTCC
AAAGCGAGGAGTGCCTTATCCGTTTCCCAACCACACAAAGAAGGTCCTAT
CATCTTTGGAGAAGTGGTTAATGCGGATCCCGATGCATTATCAACCAATC
TCTACAAACAGGTCAGGGCCGAATGTTTCTGATCCTTTTCCCATCATGGT
CTCCCAGGCCTTTGTTAATGGCTAAGCCAAAGGGGGGGTGCGTATGCCTT
GCCCTTTTGAGGGGGCGTTTAGCCTGGGGTTGGAAATTGGCTTGGTTTGG
GTTAATGGAAATACTTCCAATAAAAATTTGCCTCCCCTCCGGGGTTTTCT
CCAAAGGGTTGGTTAGGTCCCGGCACTCCCCTCTTCTCTTGTGCTGCTGT
GTTTAAAGTTTTTTGCGAAAAATTATTTTTTCCCCTCATTTGAACTTATC
AAACTGTTGGGCACACTTCGCTTGCCTCTTTCGGGGGGGGGGAGTACAAA
AATGTCTCGTCTGCTGT
back to top