EY659208

Overview
NameEY659208
Unique NameEY659208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC6_ORYSJ (Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.474e-34
Identity = 69/154 (44.81%), Postives = 93/154 (60.39%), Query Frame = 3
Query:   48 CVWFL-------FPAGLAVASITRHYKFDIKMQNVTRLCH--TKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVIFQSEECLIRFPT 482
            C W +       F A  A A +  H  F++   ++ R+C     S+  VNG+ PGP++ AREGD ++I V+N  P N+++HWHG+ Q  + WADGPA +TQCPI  G  Y Y F + GQ GTL+WHAH S++RATVYG LVI         FPT
Sbjct:    3 CSWMIPVFAILAFVASAAQADVVEH-TFNVATLSLPRICQPGNTSVTAVNGRVPGPQVEAREGDTVVIHVINDSPYNVTVHWHGVFQRGTPWADGPAMVTQCPIRPGHRYTYRFAVAGQEGTLWWHAHSSYMRATVYGALVIRPRRAGGYPFPT 155          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC25_ORYSJ (Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC25 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.481e-33
Identity = 66/140 (47.14%), Postives = 94/140 (67.14%), Query Frame = 3
Query:   30 HRSAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIIT-VNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVI 446
            H S +L +     + +A A++  H  F++   ++++LC    IIT VNGQ PGP I AREGD +++ +VN  P ++++HWHG+ Q  + WADGPA +TQCP+  G +Y Y F + GQ GTL+WHAH S+ RATVYG LVI
Sbjct:    4 HWSLLLFIAIALVSSVAQAAVVEH-TFNVGNFSISQLCQPPLIITAVNGQLPGPTIYAREGDTVVVHLVNTSPYSMTLHWHGVLQRGTPWADGPAMVTQCPVQPGGNYTYRFNVDGQEGTLWWHAHVSFHRATVYGALVI 142          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC18_ORYSJ (Laccase-18 OS=Oryza sativa subsp. japonica GN=LAC18 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.481e-33
Identity = 57/113 (50.44%), Postives = 80/113 (70.80%), Query Frame = 3
Query:  108 FDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVI 446
            F +   NVT LC+T  I  VNG+FPGP +   EGD +++ V+N +P+ ++IHWHG+RQ++S WADG  Y+T+CPIH G    Y F +TGQ GTL+WHAH + +RAT+ G  +I
Sbjct:   36 FMVHEMNVTHLCNTTKIYVVNGRFPGPTVDVTEGDTVVVHVINRLPHGLTIHWHGVRQMRSCWADGAGYVTECPIHPGGEKTYRFNVTGQVGTLWWHAHVTCLRATINGAFII 148          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC18_ORYSI (Putative laccase-18 OS=Oryza sativa subsp. indica GN=LAC18 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.481e-33
Identity = 57/113 (50.44%), Postives = 80/113 (70.80%), Query Frame = 3
Query:  108 FDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVI 446
            F +   NVT LC+T  I  VNG+FPGP +   EGD +++ V+N +P+ ++IHWHG+RQ++S WADG  Y+T+CPIH G    Y F +TGQ GTL+WHAH + +RAT+ G  +I
Sbjct:   36 FMVHEMNVTHLCNTTKIYVVNGRFPGPTVDVTEGDTVVVHVINRLPHGLTIHWHGVRQMRSCWADGAGYVTECPIHPGGEKTYRFNVTGQVGTLWWHAHVTCLRATINGAFII 148          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC19_ORYSJ (Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC19 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.060e-32
Identity = 60/141 (42.55%), Postives = 91/141 (64.54%), Query Frame = 3
Query:   36 SAILCVWFLFPAGLAV----ASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVI 446
            +++LC   +    +AV    A++  H  F +   N T LC+T  I  VNGQFPGP +   EGD +++ V+N +P  ++IHWHG+RQ++S WADG  ++T+CPI  G  + Y F +TGQ GTL+WHAH + +RAT+ G  ++
Sbjct:    8 TSLLCAITVAVLAVAVVSGEAAVVEH-TFVVHEMNATHLCNTTKIYVVNGQFPGPTVDVTEGDTVVVHVINKLPFGLTIHWHGVRQMRSCWADGAGFVTECPIPPGNEHTYRFNVTGQVGTLWWHAHVTCLRATINGAFIV 147          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC19_ORYSI (Putative laccase-19 OS=Oryza sativa subsp. indica GN=LAC19 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.060e-32
Identity = 60/141 (42.55%), Postives = 91/141 (64.54%), Query Frame = 3
Query:   36 SAILCVWFLFPAGLAV----ASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVI 446
            +++LC   +    +AV    A++  H  F +   N T LC+T  I  VNGQFPGP +   EGD +++ V+N +P  ++IHWHG+RQ++S WADG  ++T+CPI  G  + Y F +TGQ GTL+WHAH + +RAT+ G  ++
Sbjct:    8 TSLLCAITVAVLAVAVVSGEAAVVEH-TFVVHEMNATHLCNTTKIYVVNGQFPGPTVDVMEGDTVVVHVINKLPFGLTIHWHGVRQMRSCWADGAGFVTECPIPPGNEHTYRFNVTGQVGTLWWHAHVTCLRATINGAFIV 147          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC15_ARATH (Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.034e-31
Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 3
Query:   57 FLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVIFQSEECLIRFP 479
            FL    L    I  HY F ++    T+LC TK+I+TVN QFPGP I   +GD + + V N    NI++HWHG+ Q ++ W+DGP YITQCPI  G  ++Y    + +  T++WHAH SW RATV+G + ++     ++ FP
Sbjct:    9 FLISLFLYNNCIAHHYTFTVREVPYTKLCSTKAILTVNSQFPGPIIKVHKGDTIYVNVQNRASENITMHWHGVEQPRNPWSDGPEYITQCPIRPGSDFLYKVIFSIEDTTVWWHAHSSWTRATVHGLIFVYPRPPQILPFP 149          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC20_ORYSJ (Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC20 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.763e-31
Identity = 64/142 (45.07%), Postives = 91/142 (64.08%), Query Frame = 3
Query:   36 SAILCVWFLFPAGLAVASI-----TRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVI 446
            +++LC   +  A LAVA++        + F +   NVT LC+T  I  VNGQ PGP +   EGD ++I VVN +P+ ++IHWHG+RQL+S WADG  +IT+CPI  G    Y F +T Q GTL+WHAH + +R+T+ G  +I
Sbjct:    3 ASLLCT--VAVAVLAVAAVGGEAGVVEHTFVVHEMNVTHLCNTTKIFVVNGQLPGPTVDVTEGDTVVIHVVNKIPHGLTIHWHGVRQLRSCWADGAGFITECPIPPGSERTYRFNVTDQVGTLWWHAHVTCLRSTINGAFII 142          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC20_ORYSI (Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.303e-31
Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = 3
Query:   36 SAILCVWFLFPAGLAVASI-----TRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVI 446
            +++LC   +  A LAVA++        + F +   NVT LC+T  I  VNGQ PGP +   EGD +++ VVN +P+ ++IHWHG+RQL+S WADG  +IT+CPI  G    Y F +T Q GTL+WHAH + +R+T+ G  +I
Sbjct:    3 ASLLCT--VAVAVLAVAAVGGEAGVVEHTFVVHEMNVTHLCNTTKIFVVNGQLPGPTVDVTEGDTVVVHVVNKIPHGLTIHWHGVRQLRSCWADGAGFITECPIPPGSERTYRFNVTDQVGTLWWHAHVTCLRSTINGAFII 142          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC9_ARATH (Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.747e-31
Identity = 61/126 (48.41%), Postives = 79/126 (62.70%), Query Frame = 3
Query:   69 AGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVI 446
            + +A A+I  H    +K   VT LC  + I  VNG  PGP I  REGD L++ V+N    N++IHWHG+ QL+S W DG   ITQCPI    ++ Y F ITGQ GTL WHAH   +RAT++G L+I
Sbjct:   20 SSIASAAIVEHV-LHVKDVVVTPLCKEQMIPIVNGSLPGPTINVREGDTLVVHVINKSTYNVTIHWHGVFQLKSVWMDGANMITQCPIQPSNNFTYQFDITGQEGTLLWHAHVVNLRATIHGALII 144          

HSP 2 Score: 26.9498 bits (58), Expect = 2.747e-31
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2
Query:  449 PKRGVPYPFPNHTKKVLSSLEKW 517
            P+ G PYPFP   K+V    ++W
Sbjct:  146 PRSGRPYPFPKPYKEVPLIFQQW 168          
The following BLAST results are available for this feature:
BLAST of EY659208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
LAC6_ORYSJ6.474e-3444.81Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 ... [more]
LAC25_ORYSJ5.481e-3347.14Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC18_ORYSJ5.481e-3350.44Laccase-18 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC18_ORYSI5.481e-3350.44Putative laccase-18 OS=Oryza sativa subsp. indica ... [more]
LAC19_ORYSJ6.060e-3242.55Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC19_ORYSI6.060e-3242.55Putative laccase-19 OS=Oryza sativa subsp. indica ... [more]
LAC15_ARATH1.034e-3142.55Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV... [more]
LAC20_ORYSJ1.763e-3145.07Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC20_ORYSI2.303e-3144.37Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 ... [more]
LAC9_ARATH2.747e-3148.41Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659208 ID=EY659208; Name=EY659208; organism=Citrus sinensis; type=EST; length=917bp
CGGACGCGTGGGTGCTTCTCTTCTTCCGTCATCGCTCAGCAATTTTGTGC
GTTTGGTTTCTCTTTCCTGCTGGCCTTGCTGTAGCCAGCATTACAAGGCA
CTACAAGTTTGATATTAAGATGCAAAATGTGACACGACTGTGCCACACCA
AAAGCATAATCACAGTAAATGGACAGTTTCCAGGGCCCCGCATTGTTGCC
AGAGAGGGTGATCGTCTTATTATCAAAGTGGTTAATCATGTCCCAAACAA
CATCTCCATCCATTGGCATGGGATTCGACAGCTACAGAGTGGATGGGCTG
ATGGGCCTGCCTACATAACTCAATGCCCTATACATACTGGCCAGAGTTAT
GTATACAATTTCACAATTACAGGACAAAGAGGGACCCTGTTTTGGCATGC
TCATATNTCTTGGATACGAGCGACTGTGTATGGGCCCCTTGTCATTTTCC
AAAGCGAGGAGTGCCTTATCCGTTTCCCAACCACACAAAGAAGGTCCTAT
CATCTTTGGAGAAGTGGTTAATGCGGATCCCGATGCATTATCAACCAATC
TCTACAAACAGGTCAGGGCCGAATGTTTCTGATCCTTTTCCCATCATGGT
CTCCCAGGCCTTTGTTAATGGCTAAGCCAAAGGGGGGGTGCGTATGCCTT
GCCCTTTTGAGGGGGCGTTTAGCCTGGGGTTGGAAATTGGCTTGGTTTGG
GTTAATGGAAATACTTCCAATAAAAATTTGCCTCCCCTCCGGGGTTTTCT
CCAAAGGGTTGGTTAGGTCCCGGCACTCCCCTCTTCTCTTGTGCTGCTGT
GTTTAAAGTTTTTTGCGAAAAATTATTTTTTCCCCTCATTTGAACTTATC
AAACTGTTGGGCACACTTCGCTTGCCTCTTTCGGGGGGGGGGAGTACAAA
AATGTCTCGTCTGCTGT
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