EY659208

Overview
NameEY659208
Unique NameEY659208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC8_ARATH (Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.744e-30
Identity = 60/126 (47.62%), Postives = 79/126 (62.70%), Query Frame = 3
Query:   69 AGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVI 446
            + +A A++  H    I+   V  LC  + I   NG  PGP I  REGD L++ V+N+   N++IHWHG+ QL+S W DG   ITQCPI  G ++ Y F ITGQ GTL WHAH   +RAT++G LVI
Sbjct:   20 SSIASAAVVEHV-LHIQDVVVKPLCKEQIIPAANGSLPGPTINVREGDTLVVNVINNSTYNVTIHWHGVFQLKSVWMDGANMITQCPIQPGYNFTYQFDITGQEGTLLWHAHVVNLRATLHGALVI 144          

HSP 2 Score: 26.9498 bits (58), Expect = 1.744e-30
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2
Query:  449 PKRGVPYPFPNHTKKVLSSLEKW 517
            P+ G PYPFP   K+V    ++W
Sbjct:  146 PRSGRPYPFPKPYKEVPIVFQQW 168          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC8_ORYSJ (Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.546e-30
Identity = 61/123 (49.59%), Postives = 78/123 (63.41%), Query Frame = 3
Query:   78 AVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVI 446
            A A++  H  F +    +T+LC    I T N Q PGP I   EGD L++  VN  P  +S+HWHG+ QL+SGW DG   ITQCPI    ++ Y F ITGQ GTL+WHAH S +RAT+YG L+I
Sbjct:   19 ASAAVVEH-TFKVGGTKITQLCMNSVIYTANQQLPGPTIEVTEGDTLVVHAVNDSPYPLSLHWHGVYQLRSGWNDGANKITQCPIQPSGNFTYRFNITGQEGTLWWHAHSSLLRATIYGALII 140          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC15_ORYSJ (Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC15 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.138e-29
Identity = 56/127 (44.09%), Postives = 78/127 (61.42%), Query Frame = 3
Query:   66 PAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRATVYGPLVI 446
            P+  A A++   + F +   N+T LC   +   VNGQ PGP I   EGD + + VVN  P N++IHWHG+ QL + W DG   ITQ PI    ++ Y F + GQ GTL+WHAH +++R TV+G L+I
Sbjct:   33 PSAAAAAAV--EHTFVVSQVNMTHLCKEMAFTVVNGQLPGPTIEVTEGDSVTVHVVNKSPYNLTIHWHGVYQLLNCWNDGVPMITQRPIQPNHNFTYRFNVAGQEGTLWWHAHDAFLRGTVHGALII 157          

HSP 2 Score: 23.0978 bits (48), Expect = 4.138e-29
Identity = 10/25 (40.00%), Postives = 14/25 (56.00%), Query Frame = 1
Query:  478 QPHKEGPIIFGEVVNADPDALSTNL 552
            +PH+E PII GE    D   +  N+
Sbjct:  170 RPHREVPIIIGEWWEKDLPQVDRNM 194          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.821e-21
Identity = 48/119 (40.34%), Postives = 75/119 (63.03%), Query Frame = 3
Query:   96 RHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHV-PNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIR-ATVYGPLVI 446
            RHYK++++       C+   ++ +NGQFPGP I A  GD ++++++N +    + IHWHGI Q  + WADG A I+QC I+ G+++ YNFT+    GT F+H H    R A +YG L++
Sbjct:   34 RHYKWEVEYMFWAPDCNENIVMGINGQFPGPTIRANAGDTVVVELINKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNP-GTFFYHGHLGMQRSAGLYGSLIV 151          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.812e-21
Identity = 48/119 (40.34%), Postives = 74/119 (62.18%), Query Frame = 3
Query:   96 RHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHV-PNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIR-ATVYGPLVI 446
            RHYK++++       C+   ++ +NGQFPGP I A  GD +++++ N +    + IHWHGI Q  + WADG A I+QC I+ G+++ YNFT+    GT F+H H    R A +YG L++
Sbjct:    4 RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNP-GTFFYHGHLGMQRSAGLYGSLIV 121          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC4_THACU (Laccase-4 OS=Thanatephorus cucumeris GN=LCC4 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.119e-20
Identity = 57/148 (38.51%), Postives = 79/148 (53.38%), Query Frame = 3
Query:   36 SAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNN-----ISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAH-XSWIRATVYGPLVIFQSEE 461
            S+I  +  L        +  R+YKFDIK  NV      + I++VNG  PG  I A +GD L I V N + +       +IHWHG+ Q  +   DGPA++TQCPI    SY Y   + GQ GT+++HAH  S     + GPLVI+   +
Sbjct:    3 SSITLLPLLAAVSTPAFAAVRNYKFDIKNVNVAPDGFQRPIVSVNGLVPGTLITANKGDTLRINVTNQLTDPSMRRATTIHWHGLFQATTADEDGPAFVTQCPIAQNLSYTYEIPLHGQTGTMWYHAHLASQYVDGLRGPLVIYDPND 150          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.119e-20
Identity = 48/124 (38.71%), Postives = 79/124 (63.71%), Query Frame = 3
Query:   81 VASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHV-PNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIR-ATVYGPLVI 446
            +A+ TRH+K+D++  + +       ++ +NGQFPGP I A+ GD + + + N +    + IHWHGIRQ+ + WADG A I+QC I+ G++++Y F +  + GT F+H H    R A +YG L++
Sbjct:   26 MAAKTRHFKWDVEYIHWSPDGEESVVMGINGQFPGPTIRAKAGDTVAVHLTNKLHTEGVVIHWHGIRQIGTPWADGTAAISQCAINPGETFLYRFKV-DKAGTYFYHGHYGMQRSAGLYGSLIV 148          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC4_TRAVI (Laccase-4 OS=Trametes villosa GN=LCC4 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.949e-20
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 3
Query:  147 TKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN-----NISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRAT-VYGPLVIFQSEE 461
            T++ +  NG FPGP I   +GD   I V++++ N     + SIHWHG  Q  + WADG A++ QCPI TG S++Y+FT T Q GT ++H+H S      + GP+V++   +
Sbjct:   43 TRAAVLANGVFPGPLITGNKGDNFQINVIDNLSNETMLKSTSIHWHGFFQKGTNWADGAAFVNQCPIATGNSFLYDFTATDQAGTFWYHSHLSTQYCDGLRGPMVVYDPSD 153          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC4_TRAVE (Laccase-4 OS=Trametes versicolor GN=LCC4 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.949e-20
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 3
Query:  147 TKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN-----NISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRAT-VYGPLVIFQSEE 461
            T++ +  NG FPGP I   +GD   I V++++ N     + SIHWHG  Q  + WADG A++ QCPI TG S++Y+FT T Q GT ++H+H S      + GP+V++   +
Sbjct:   43 TRAAVLANGVFPGPLITGNKGDNFQINVIDNLSNETMLKSTSIHWHGFFQKGTNWADGAAFVNQCPIATGNSFLYDFTATDQAGTFWYHSHLSTQYCDGLRGPMVVYDPSD 153          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC3_TRAVI (Laccase-3 OS=Trametes villosa GN=LCC3 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.949e-20
Identity = 52/141 (36.88%), Postives = 78/141 (55.32%), Query Frame = 3
Query:   57 FLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN-----NISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRAT-VYGPLVIFQSEE 461
            FL     A+ASI    + DI  + +      +  +   G FPGP I  ++GD   I VV+ + N     + +IHWHG+ Q  + WADGPA++TQCPI TG  ++YNF +  Q GT ++H+H +      + GPLVI+   +
Sbjct:   12 FLGACSSALASIGPVTELDIVNKVIAPDGVARDTVLAGGTFPGPLITGKKGDNFRINVVDKLVNQTMLTSTTIHWHGMFQHTTNWADGPAFVTQCPITTGDDFLYNFRVPDQTGTYWYHSHLALQYCDGLRGPLVIYDPHD 152          
The following BLAST results are available for this feature:
BLAST of EY659208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
LAC8_ARATH1.744e-3047.62Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=... [more]
LAC8_ORYSJ2.546e-3049.59Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 ... [more]
LAC15_ORYSJ4.138e-2944.09Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
ASO_CUCMA2.821e-2140.34L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
ASO_CUCPM4.812e-2140.34L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
LAC4_THACU3.119e-2038.51Laccase-4 OS=Thanatephorus cucumeris GN=LCC4 PE=1 ... [more]
ASO_TOBAC3.119e-2038.71L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
LAC4_TRAVI6.949e-2040.54Laccase-4 OS=Trametes villosa GN=LCC4 PE=3 SV=1[more]
LAC4_TRAVE6.949e-2040.54Laccase-4 OS=Trametes versicolor GN=LCC4 PE=3 SV=1[more]
LAC3_TRAVI6.949e-2036.88Laccase-3 OS=Trametes villosa GN=LCC3 PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659208 ID=EY659208; Name=EY659208; organism=Citrus sinensis; type=EST; length=917bp
CGGACGCGTGGGTGCTTCTCTTCTTCCGTCATCGCTCAGCAATTTTGTGC
GTTTGGTTTCTCTTTCCTGCTGGCCTTGCTGTAGCCAGCATTACAAGGCA
CTACAAGTTTGATATTAAGATGCAAAATGTGACACGACTGTGCCACACCA
AAAGCATAATCACAGTAAATGGACAGTTTCCAGGGCCCCGCATTGTTGCC
AGAGAGGGTGATCGTCTTATTATCAAAGTGGTTAATCATGTCCCAAACAA
CATCTCCATCCATTGGCATGGGATTCGACAGCTACAGAGTGGATGGGCTG
ATGGGCCTGCCTACATAACTCAATGCCCTATACATACTGGCCAGAGTTAT
GTATACAATTTCACAATTACAGGACAAAGAGGGACCCTGTTTTGGCATGC
TCATATNTCTTGGATACGAGCGACTGTGTATGGGCCCCTTGTCATTTTCC
AAAGCGAGGAGTGCCTTATCCGTTTCCCAACCACACAAAGAAGGTCCTAT
CATCTTTGGAGAAGTGGTTAATGCGGATCCCGATGCATTATCAACCAATC
TCTACAAACAGGTCAGGGCCGAATGTTTCTGATCCTTTTCCCATCATGGT
CTCCCAGGCCTTTGTTAATGGCTAAGCCAAAGGGGGGGTGCGTATGCCTT
GCCCTTTTGAGGGGGCGTTTAGCCTGGGGTTGGAAATTGGCTTGGTTTGG
GTTAATGGAAATACTTCCAATAAAAATTTGCCTCCCCTCCGGGGTTTTCT
CCAAAGGGTTGGTTAGGTCCCGGCACTCCCCTCTTCTCTTGTGCTGCTGT
GTTTAAAGTTTTTTGCGAAAAATTATTTTTTCCCCTCATTTGAACTTATC
AAACTGTTGGGCACACTTCGCTTGCCTCTTTCGGGGGGGGGGAGTACAAA
AATGTCTCGTCTGCTGT
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