EY659208

Overview
NameEY659208
Unique NameEY659208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC5_TRAVI (Laccase-5 OS=Trametes villosa GN=LCC5 PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.185e-19
Identity = 44/111 (39.64%), Postives = 69/111 (62.16%), Query Frame = 3
Query:  147 TKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN-----NISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRAT-VYGPLVIFQSEE 461
            T++ +   G FPGP I   +GD   I V++++ N     + +IHWHGI Q  + WADG A++ QCPI TG S++Y+FT+  Q GT ++H+H S      + GPLV++  ++
Sbjct:   44 TRAAVLAGGVFPGPLITGNKGDEFQINVIDNLTNETMLKSTTIHWHGIFQAGTNWADGAAFVNQCPIATGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDPDD 154          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC5_TRAVE (Laccase-5 OS=Trametes versicolor GN=LCC5 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.185e-19
Identity = 44/111 (39.64%), Postives = 69/111 (62.16%), Query Frame = 3
Query:  147 TKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN-----NISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRAT-VYGPLVIFQSEE 461
            T++ +   G FPGP I   +GD   I V++++ N     + +IHWHGI Q  + WADG A++ QCPI TG S++Y+FT+  Q GT ++H+H S      + GPLV++  ++
Sbjct:   44 TRAAVLAGGVFPGPLITGNKGDEFQINVIDNLTNETMLKSTTIHWHGIFQAGTNWADGAAFVNQCPIATGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDPDD 154          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC2_BOTFU (Laccase-2 OS=Botryotinia fuckeliana GN=lcc2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.185e-19
Identity = 55/121 (45.45%), Postives = 73/121 (60.33%), Query Frame = 3
Query:   90 ITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNN-ISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRAT-VYGPLVI 446
            +TR Y   ++   +T   +T+S +T NG  PGP I A  GD LII V N++ +N  SIHWHGIRQL S   DG   +TQCPI  G +  Y F  T Q GT ++H+H S   A  ++GPL+I
Sbjct:   67 VTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAITADWGDNLIIHVTNNLQHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQAT-QYGTTWYHSHFSLQYADGLFGPLII 186          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.449e-19
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = 3
Query:   42 ILCVWFLFPAGLAVASITR--HYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHV-PNNISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIR-ATVYGPLVI 446
            +L + F F   L+ A   +  HYK+D++    +  C    ++ +NG+FPGP I A  GD +++++ N +    + IHWHGI Q  + WADG A I+QC I+ G+++ Y F +  + GT F+H H    R A +YG L++
Sbjct:   19 VLSIIFGFGITLSEAGFPKIKHYKWDVEYMFWSPDCVENIVMGINGEFPGPTIRANAGDIVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFTYRF-VVDKAGTYFYHGHLGMQRSAGLYGSLIV 156          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC1_TRAVI (Laccase-1 OS=Trametes villosa GN=LCC1 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.712e-18
Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 3
Query:  147 TKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNI-----SIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRAT-VYGPLVIFQSEE 461
            ++  + VNG  PGP I    GDR  + V++++ N+      SIHWHG  Q  + WADGPA+I QCPI +G S++Y+F +  Q GT ++H+H S      + GP V++   +
Sbjct:   42 SRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMVKSTSIHWHGFFQKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPND 152          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC1_PHLRA (Laccase OS=Phlebia radiata GN=LAC PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.235e-18
Identity = 53/139 (38.13%), Postives = 75/139 (53.96%), Query Frame = 3
Query:   60 LFPAGL---AVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN-----NISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRAT-VYGPLVIF 449
            L  AGL   A+ASI     F I    V+    ++  +   G FPGP I   +GD   I V++ + N       +IHWHG  Q  + WADGPA+I QCPI +G S++YNF +  Q GT ++H+H S      + GP V++
Sbjct:   10 LVVAGLSARALASIGPVTDFHIVNAAVSPDGFSRQAVLAEGVFPGPLIAGNKGDNFQINVIDELTNATMLKTTTIHWHGFFQHGTNWADGPAFINQCPIASGDSFLYNFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVY 148          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC2_THACU (Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.504e-18
Identity = 52/142 (36.62%), Postives = 78/142 (54.93%), Query Frame = 3
Query:   60 LFPAGLAVASITR--HYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN-----NISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRAT-VYGPLVIFQSEE 461
            LF   L  ++  R   Y FD+    V     T++ + VNG+FPGP I A +GD L I V N + +     + +IHWHG+ Q ++   DGPA++TQCPI   +SY Y   +  Q GT ++H+H S      + GP+VI+   +
Sbjct:    8 LFALSLVASAFARVVDYGFDVANGAVAPDGVTRNAVLVNGRFPGPLITANKGDTLKITVRNKLSDPTMRRSTTIHWHGLLQHRTAEEDGPAFVTQCPIPPQESYTYTMPLGEQTGTYWYHSHLSSQYVDGLRGPIVIYDPHD 149          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC1_TRAHI (Laccase OS=Trametes hirsuta PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.504e-18
Identity = 46/137 (33.58%), Postives = 74/137 (54.01%), Query Frame = 3
Query:   69 AGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNI-----SIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRAT-VYGPLVIFQSEE 461
            A +A A+I       I    V+     +  + VN   PGP +   +GDR  + V++++ N+      SIHWHG  Q  + WADGPA++ QCPI +G S++Y+F +  Q GT ++H+H S      + GP V++   +
Sbjct:   16 AAVAHAAIGPTADLTISNAEVSPDGFARQAVVVNNVTPGPLVAGNKGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPAFVNQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPND 152          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC2_TRAVI (Laccase-2 OS=Trametes villosa GN=LCC2 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.109e-17
Identity = 42/110 (38.18%), Postives = 66/110 (60.00%), Query Frame = 3
Query:  150 KSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNN-----ISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRAT-VYGPLVIFQSEE 461
            +  I VNG  P P I  ++GDR  + VV+ + N+      SIHWHG  Q  + WA+GPA++ QCPI +G S++Y+F +  Q GT ++H+H S      + GP V++  ++
Sbjct:   42 RDAIVVNGVVPSPLITGKKGDRFQLNVVDTLTNHSMLKSTSIHWHGFFQAGTNWAEGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPKD 151          
BLAST of EY659208 vs. ExPASy Swiss-Prot
Match: LAC2_TRAVE (Laccase-2 OS=Trametes versicolor GN=LCC2 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.472e-17
Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = 3
Query:  150 KSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNN-----ISIHWHGIRQLQSGWADGPAYITQCPIHTGQSYVYNFTITGQRGTLFWHAHXSWIRAT-VYGPLVIFQSEE 461
            +  I VNG  P P I  ++GDR  + V + + N+      SIHWHG  Q  + WADGPA++ QCPI +G S++Y+F +  Q GT ++H+H S      + GP V++  ++
Sbjct:   42 RDAIVVNGVVPSPLITGKKGDRFQLNVDDTLTNHSMLKSTSIHWHGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPKD 151          
The following BLAST results are available for this feature:
BLAST of EY659208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
LAC5_TRAVI1.185e-1939.64Laccase-5 OS=Trametes villosa GN=LCC5 PE=3 SV=2[more]
LAC5_TRAVE1.185e-1939.64Laccase-5 OS=Trametes versicolor GN=LCC5 PE=2 SV=1[more]
LAC2_BOTFU1.185e-1945.45Laccase-2 OS=Botryotinia fuckeliana GN=lcc2 PE=2 S... [more]
ASO_CUCSA3.449e-1935.97L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]
LAC1_TRAVI1.712e-1838.74Laccase-1 OS=Trametes villosa GN=LCC1 PE=3 SV=1[more]
LAC1_PHLRA2.235e-1838.13Laccase OS=Phlebia radiata GN=LAC PE=1 SV=2[more]
LAC2_THACU6.504e-1836.62Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 ... [more]
LAC1_TRAHI6.504e-1833.58Laccase OS=Trametes hirsuta PE=1 SV=1[more]
LAC2_TRAVI1.109e-1738.18Laccase-2 OS=Trametes villosa GN=LCC2 PE=3 SV=1[more]
LAC2_TRAVE2.472e-1738.18Laccase-2 OS=Trametes versicolor GN=LCC2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659208 ID=EY659208; Name=EY659208; organism=Citrus sinensis; type=EST; length=917bp
CGGACGCGTGGGTGCTTCTCTTCTTCCGTCATCGCTCAGCAATTTTGTGC
GTTTGGTTTCTCTTTCCTGCTGGCCTTGCTGTAGCCAGCATTACAAGGCA
CTACAAGTTTGATATTAAGATGCAAAATGTGACACGACTGTGCCACACCA
AAAGCATAATCACAGTAAATGGACAGTTTCCAGGGCCCCGCATTGTTGCC
AGAGAGGGTGATCGTCTTATTATCAAAGTGGTTAATCATGTCCCAAACAA
CATCTCCATCCATTGGCATGGGATTCGACAGCTACAGAGTGGATGGGCTG
ATGGGCCTGCCTACATAACTCAATGCCCTATACATACTGGCCAGAGTTAT
GTATACAATTTCACAATTACAGGACAAAGAGGGACCCTGTTTTGGCATGC
TCATATNTCTTGGATACGAGCGACTGTGTATGGGCCCCTTGTCATTTTCC
AAAGCGAGGAGTGCCTTATCCGTTTCCCAACCACACAAAGAAGGTCCTAT
CATCTTTGGAGAAGTGGTTAATGCGGATCCCGATGCATTATCAACCAATC
TCTACAAACAGGTCAGGGCCGAATGTTTCTGATCCTTTTCCCATCATGGT
CTCCCAGGCCTTTGTTAATGGCTAAGCCAAAGGGGGGGTGCGTATGCCTT
GCCCTTTTGAGGGGGCGTTTAGCCTGGGGTTGGAAATTGGCTTGGTTTGG
GTTAATGGAAATACTTCCAATAAAAATTTGCCTCCCCTCCGGGGTTTTCT
CCAAAGGGTTGGTTAGGTCCCGGCACTCCCCTCTTCTCTTGTGCTGCTGT
GTTTAAAGTTTTTTGCGAAAAATTATTTTTTCCCCTCATTTGAACTTATC
AAACTGTTGGGCACACTTCGCTTGCCTCTTTCGGGGGGGGGGAGTACAAA
AATGTCTCGTCTGCTGT
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