EY659195

Overview
NameEY659195
Unique NameEY659195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659195_ssr507 microsatellite EY659195_ssr507:507..518. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7629 contig Csv1_Contig7629:34..916. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY659195 vs. ExPASy Swiss-Prot
Match: IFRH_LUPAL (Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.267e-23
Identity = 67/140 (47.86%), Postives = 87/140 (62.14%), Query Frame = 3 
Query:   48 KSKILFIGGTGYIGKFIVEASAKAGHPTFVLVRESTLSDPCKSQLLGHFKKLGVNLVIGDVLNHDSLVKAIKQVDVVISTV------GHTLLRDQVKIIAAIKEAGDIKRFFPSEFGNDVDRV-HAVEPAKSALATKAKI 446
            KSK+L +GGTGY+G+ IV+AS + GH TF+L R     D  K Q+L  FKK G  LV     +H SLV A+K VDVVI T+       H LL  Q+K++ AIK+AG+IKRF PSEFG D   + HA+EP +     K  +
Sbjct:    3 KSKVLVVGGTGYVGRRIVKASLEHGHETFILQRPEIGLDIEKLQILLSFKKQGAILVEASFSDHKSLVDAVKLVDVVICTMSGVHFRSHNLL-TQLKLVEAIKDAGNIKRFLPSEFGMDPALMGHALEPGRVTFDEKMTV 141

HSP 2 Score: 103.219 bits (256), Expect = 2.023e-21
Identity = 49/114 (42.98%), Postives = 68/114 (59.65%), Query Frame = 2 
Query:  416 KISISHKGKNPRTVDAERIPYTYVASNFFAAYLLTNLSQAGATAPPKDKVGILRDGNPKAVYNKEDDIGTYTIKAGDDPRTLKQMPLIKPPGYIYSFNDLVSLWERKIGKTLPK 757
            +++   K    + ++   IP+TY+++N FA Y   NLSQ     PP+DKV +  DGN K VY  EDD+ TYTIK  DDPRTL +   ++PP  I +  +L+  WE  IGK L K
Sbjct:  132 RVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDKVLLYGDGNVKPVYMDEDDVATYTIKTIDDPRTLNKTVYLRPPENILTHKELIEKWEELIGKQLEK 245
The following BLAST results are available for this feature:
BLAST of EY659195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
IFRH_LUPAL1.267e-2347.86Isoflavone reductase homolog OS=Lupinus albus PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659195 ID=EY659195; Name=EY659195; organism=Citrus sinensis; type=EST; length=882bp
GGAAAGATCCTCGAAATTGAACTGAATAATTCTCCGTAATGGCGTCCAAA
AGCAAGATTCTATTCATCGGCGGTACAGGGTACATCGGCAAATTCATCGT
CGAAGCGAGCGCGAAAGCCGGCCACCCGACGTTCGTGCTCGTGAGAGAAT
CCACACTCTCCGATCCTTGCAAATCTCAGCTCCTCGGTCACTTCAAAAAA
CTCGGAGTCAATCTCGTCATCGGAGATGTGTTGAATCACGATAGCTTGGT
GAAGGCGATAAAACAAGTGGACGTGGTGATATCAACGGTCGGGCACACTT
TATTACGTGATCAGGTCAAGATTATTGCGGCCATTAAAGAAGCTGGTGAC
ATTAAGAGATTCTTCCCTTCAGAATTTGGGAATGATGTTGATCGAGTCCA
TGCCGTTGAGCCAGCAAAATCAGCATTAGCCACAAAGGCAAAAATCCCCG
AACCGTAGATGCTGAACGGATTCCGTATACTTATGTAGCGTCGAATTTCT
TTGCTGCTTACTTACTTACCAATTTGTCGCAGGCCGGGGCCACTGCCCCA
CCTAAGGATAAAGTTGGCATCTTACGCGATGGAAATCCAAAAGCTGTGTA
TAACAAGGAAGATGATATTGGGACCTATACTATCAAAGCGGGTGATGATC
CCAGGACCTTGAAGCAAATGCCTCTCATTAAACCCCCTGGTTATATTTAC
TCATTCAATGATCTTGTGTCCTTGTGGGAGAGAAAGATTGGGAAAACCCT
TCCAAAGGTGGACTTCCCGGATGAGCAAGTCCCAAAGAATATTTGATAAG
CTGCACCTTCCAACATGGGGAATTATCAAACACCACTTTGGGTTCGTAGT
GGGAGATCAACCCATTTGCACATTGAACACTG
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