EY659187 | Citrus Genome Database

Overview


Name	EY659187
Unique Name	EY659187
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	893

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_GOSHI (Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 437.573 bits (1124), Expect = 1.549e-127
Identity = 221/247 (89.47%), Postives = 226/247 (91.50%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKT 743
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF+AV                 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEF+TNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFRTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKT 337

HSP 2 Score: 40.0466 bits (92), Expect = 1.549e-127
Identity = 19/31 (61.29%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     TV PGGDL
Sbjct:  338 KRTIQFADWCPTGFKCGINYQPPTVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA2_HORVU (Tubulin alpha-2 chain OS=Hordeum vulgare GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 438.343 bits (1126), Expect = 9.980e-127
Identity = 221/254 (87.01%), Postives = 226/254 (88.98%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKL+DNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV++LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 36.5798 bits (83), Expect = 9.980e-127
Identity = 18/31 (58.06%), Postives = 20/31 (64.52%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTISTT-VGPGGDL 832
            +RTIQF D CPTGF  G+      V PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPGVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA_CHLVU (Tubulin alpha chain OS=Chlorella vulgaris GN=TUBA PE=3 SV=1)

HSP 1 Score: 435.647 bits (1119), Expect = 1.302e-126
Identity = 217/254 (85.43%), Postives = 227/254 (89.37%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVST+VVEPYNSVLSTHSLLEHTDV+V+LDNEA+YDICRRSLDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY+PVISAEKA+HEQLSVAEITNSAF+ +SMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVSVMLDNEAVYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYSPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 1.302e-126
Identity = 19/31 (61.29%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     TV PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA_WHEAT (Tubulin alpha chain OS=Triticum aestivum GN=TUBA PE=2 SV=1)

HSP 1 Score: 437.187 bits (1123), Expect = 2.218e-126
Identity = 220/254 (86.61%), Postives = 226/254 (88.98%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKL+DNCTGLQGFLVFNAV                 VDYG+KSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV++LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 36.5798 bits (83), Expect = 2.218e-126
Identity = 18/31 (58.06%), Postives = 20/31 (64.52%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTISTT-VGPGGDL 832
            +RTIQF D CPTGF  G+      V PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPGVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA_OXYGR (Tubulin alpha chain OS=Oxytricha granulifera PE=3 SV=1)

HSP 1 Score: 433.335 bits (1113), Expect = 6.430e-126
Identity = 216/254 (85.04%), Postives = 226/254 (88.98%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD CTGLQGFLVFN+V                 VDYGKKSKLGFTVYPSPQVST+VVEPYNSVLSTHSLLEHTDVAV+LDNEA+YDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ +SMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADQCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 6.430e-126
Identity = 19/31 (61.29%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     TV PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_VOLCA (Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 431.795 bits (1109), Expect = 6.430e-126
Identity = 216/254 (85.04%), Postives = 225/254 (88.58%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVST+VVEPYNSVLSTHSLLEHTDVAV+LDNEAIYDICRRSLDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP+ISAEKA+HEQLSVAEITN+AF+ +SMM KCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 40.4318 bits (93), Expect = 6.430e-126
Identity = 22/49 (44.90%), Postives = 29/49 (59.18%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLISTPQRGE 880
            +RTIQF D CPTGF  G+     TV PGGDL   +   C++ ++   GE
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGE 386

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_CHLRE (Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii GN=TUBA1 PE=1 SV=1)

HSP 1 Score: 430.254 bits (1105), Expect = 1.864e-125
Identity = 214/254 (84.25%), Postives = 225/254 (88.58%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVST+VVEPYNSVLSTHSLLEHTDVAV+LDNEAIYDICRRSLDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAP+ISAEKA+HEQLSVAEITN+AF+ +SMM KCDPRHGKYMACCLMYRGD VPKDVNA+V TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNASVATIKTKRTIQFV 344

HSP 2 Score: 40.4318 bits (93), Expect = 1.864e-125
Identity = 22/49 (44.90%), Postives = 29/49 (59.18%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLISTPQRGE 880
            +RTIQF D CPTGF  G+     TV PGGDL   +   C++ ++   GE
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGE 386

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA6_MAIZE (Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV=1)

HSP 1 Score: 432.565 bits (1111), Expect = 4.143e-125
Identity = 214/254 (84.25%), Postives = 224/254 (88.19%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSV EITN+ F+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFV 344

HSP 2 Score: 36.965 bits (84), Expect = 4.143e-125
Identity = 17/31 (54.84%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RT+QF D CPTGF  G+     +V PGGDL
Sbjct:  338 KRTVQFVDWCPTGFKCGINYQPPSVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA5_MAIZE (Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV=1)

HSP 1 Score: 432.565 bits (1111), Expect = 4.143e-125
Identity = 214/254 (84.25%), Postives = 224/254 (88.19%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSV EITN+ F+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFV 344

HSP 2 Score: 36.965 bits (84), Expect = 4.143e-125
Identity = 17/31 (54.84%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RT+QF D CPTGF  G+     +V PGGDL
Sbjct:  338 KRTVQFVDWCPTGFKCGINYQPPSVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA3_ELEIN (Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 432.565 bits (1111), Expect = 4.143e-125
Identity = 214/254 (84.25%), Postives = 224/254 (88.19%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSV EITN+ F+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFV 344

HSP 2 Score: 36.965 bits (84), Expect = 4.143e-125
Identity = 17/31 (54.84%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RT+QF D CPTGF  G+     +V PGGDL
Sbjct:  338 KRTVQFVDWCPTGFKCGINYQPPSVVPGGDL 368

The following BLAST results are available for this feature:

BLAST of EY659187 vs. ExPASy Swiss-Prot

BLAST of EY659187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420


Match Name	E-value	Identity	Description
TBA1_GOSHI	1.549e-127	89.47	Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 S...	[more]
TBA2_HORVU	9.980e-127	87.01	Tubulin alpha-2 chain OS=Hordeum vulgare GN=TUBA2 ...	[more]
TBA_CHLVU	1.302e-126	85.43	Tubulin alpha chain OS=Chlorella vulgaris GN=TUBA ...	[more]
TBA_WHEAT	2.218e-126	86.61	Tubulin alpha chain OS=Triticum aestivum GN=TUBA P...	[more]
TBA_OXYGR	6.430e-126	85.04	Tubulin alpha chain OS=Oxytricha granulifera PE=3 ...	[more]
TBA1_VOLCA	6.430e-126	85.04	Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN...	[more]
TBA1_CHLRE	1.864e-125	84.25	Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii...	[more]
TBA6_MAIZE	4.143e-125	84.25	Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV...	[more]
TBA5_MAIZE	4.143e-125	84.25	Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV...	[more]
TBA3_ELEIN	4.143e-125	84.25	Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 ...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-101-004-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659187 ID=EY659187; Name=EY659187; organism=Citrus sinensis; type=EST; length=893bp
AACAACTCATCATCGGCAAGGAAGATGCTGCCAACAATTTTGCTCGTGGC
CACTACACAATTGGGAAGGAGATTGTTGATCTATGCTTGGACCGGATCAG
AAAACTTGCTGATAATTGCACTGGGCTACAAGGGTTCCTGGTGTTCAATG
CTGTTGGAGGTGGTACTGGCTCTGGACTTGGGTCACTTCTCTTGGAGCGT
CTCTCTGTTGACTATGGAAAGAAATCAAAGCTTGGTTTCACTGTGTATCC
TTCACCTCAGGTTTCCACATCAGTTGTGGAACCTTACAACAGTGTTCTTT
CAACACATTCCCTCCTTGAGCACACCGATGTTGCTGTGCTTCTTGATAAT
GAAGCCATCTATGATATCTGCAGGCGCTCTCTTGACATTGAGCGCCCCAC
TTACACCAATCTCAACCGACTGGTCTCTCAGGTGATCTCATCCCTTACTG
CTTCTTTGAGGTTTGATGGAGCTCTGAATGTGGATGTGACTGAGTTCCAG
ACCAATTTGGTTCCCTATCCAAGGATCCATTTCATGCTCTCCTCTTATGC
CCCAGTTATCTCTGCTGAGAAGGCATTCCATGAGCAACTTTCAGTTGCTG
AGATCACCAACAGTGCTTTTGATGCATCATCCATGATGGCCAAATGTGAC
CCTCGTCATGGCAAGTACATGGCCTGCTGCTTGATGTATCGTGGTGATNG
TGTGCCTAAGGATGTGAATGCAGCTGTGGGCACCATCAAGACCAGCGCAC
AATTCAGTTTGGTGACTGTTGCCCTACTGGATTCAGTGCCGGATTAACTA
TCAGCACAACTGTGGGCCCTGGTGGGGACCTGCCAAGTGCAAAGGGCTGC
CTGCTGATTTCAACTCCACAACGTGGTGAATGGGTTTTTGCCT