EY659187 | Citrus Genome Database

Overview


Name	EY659187
Unique Name	EY659187
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	893

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_ORYSJ (Tubulin alpha-1 chain OS=Oryza sativa subsp. japonica GN=TUBA1 PE=1 SV=1)

HSP 1 Score: 432.565 bits (1111), Expect = 4.143e-125
Identity = 214/254 (84.25%), Postives = 224/254 (88.19%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSV EITN+ F+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFV 344

HSP 2 Score: 36.965 bits (84), Expect = 4.143e-125
Identity = 17/31 (54.84%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RT+QF D CPTGF  G+     +V PGGDL
Sbjct:  338 KRTVQFVDWCPTGFKCGINYQPPSVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_HORVU (Tubulin alpha-1 chain OS=Hordeum vulgare GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 432.565 bits (1111), Expect = 4.143e-125
Identity = 214/254 (84.25%), Postives = 224/254 (88.19%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSV EITN+ F+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFV 344

HSP 2 Score: 36.965 bits (84), Expect = 4.143e-125
Identity = 17/31 (54.84%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RT+QF D CPTGF  G+     +V PGGDL
Sbjct:  338 KRTVQFVDWCPTGFKCGINYQPPSVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA_TETPY (Tubulin alpha chain OS=Tetrahymena pyriformis PE=3 SV=1)

HSP 1 Score: 427.172 bits (1097), Expect = 2.669e-124
Identity = 209/254 (82.28%), Postives = 226/254 (88.98%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFN+V                 VDYGKKSKLGFT+YPSPQVST+VVEPYNS+LSTHSLLEHTDVAV+LDNEAIYDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAP+ISAEKA+HEQLSVAEITNSAF+ ++MMAKCDPRHGKYMAC +MYRGD VPKDVNA++ TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPRHGKYMACSMMYRGDVVPKDVNASIATIKTKRTIQFV 344

HSP 2 Score: 39.6614 bits (91), Expect = 2.669e-124
Identity = 19/31 (61.29%), Postives = 22/31 (70.97%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+    +TV PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKVGINYQPSTVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA_EUGGR (Tubulin alpha chain OS=Euglena gracilis GN=TUBA PE=2 SV=1)

HSP 1 Score: 427.172 bits (1097), Expect = 4.545e-124
Identity = 209/254 (82.28%), Postives = 226/254 (88.98%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFL F+AV                 VDYGKKSKLGFT+YPSPQ+ST+VVEPYNSVLSTHSLLEHTDVAV+LDNEAIYDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHF+LSSYAP+ISAEKA+HEQLSVAEITN+AF+ +SMMAKCDPRHGKYMACCLMYRGD VPKDVNA+V TIKT      V
Sbjct:   91 QLISGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLAFHAVGGGTGSGLGRLLLERLSVDYGKKSKLGFTIYPSPQISTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFVLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNASVATIKTKRTIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 4.545e-124
Identity = 19/31 (61.29%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     TV PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA_TETTH (Tubulin alpha chain OS=Tetrahymena thermophila PE=1 SV=1)

HSP 1 Score: 427.172 bits (1097), Expect = 4.545e-124
Identity = 209/254 (82.28%), Postives = 226/254 (88.98%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFN+V                 VDYGKKSKLGFT+YPSPQVST+VVEPYNS+LSTHSLLEHTDVAV+LDNEAIYDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAP+ISAEKA+HEQLSVAEITNSAF+ ++MMAKCDPRHGKYMAC +MYRGD VPKDVNA++ TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPRHGKYMACSMMYRGDVVPKDVNASIATIKTKRTIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 4.545e-124
Identity = 19/31 (61.29%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     TV PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA3_MAIZE (Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 427.557 bits (1098), Expect = 1.318e-123
Identity = 215/254 (84.65%), Postives = 223/254 (87.80%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 V+YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV++LLDNEAIYDICRRSLDIERP Y+NLNRLVSQVISSLTASLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVIS+ KAFHEQLSVAEIT+SAF+ +SMM KCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVEYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPNYSNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISSAKAFHEQLSVAEITSSAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 36.965 bits (84), Expect = 1.318e-123
Identity = 18/31 (58.06%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTI-STTVGPGGDL 832
            +RTIQF D CPTGF  G+   + TV PG DL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQAPTVVPGADL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA2_CHLRE (Tubulin alpha-2 chain OS=Chlamydomonas reinhardtii GN=TUBA2 PE=1 SV=1)

HSP 1 Score: 427.557 bits (1098), Expect = 1.318e-123
Identity = 213/254 (83.86%), Postives = 224/254 (88.19%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVST+VVEPYNSVLSTHSLLEHTDVAV+LDNEAIYDICRRSLDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAP+ISAEKA+HEQLSVAEITN+AF+ +SMM KCDP HGKYMACCLMYRGD VPKDVNA+V TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPLHGKYMACCLMYRGDVVPKDVNASVATIKTKRTIQFV 344

HSP 2 Score: 36.965 bits (84), Expect = 1.318e-123
Identity = 21/49 (42.86%), Postives = 28/49 (57.14%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLISTPQRGE 880
            +RTIQF D CPTGF  G+     TV PG DL   +   C++ ++   GE
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPTVVPGVDLAKVQRAVCMISNSTAIGE 386

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA_DAUCA (Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 SV=1)

HSP 1 Score: 442.58 bits (1137), Expect = 1.439e-123
Identity = 223/254 (87.80%), Postives = 228/254 (89.76%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQ+STSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDIC+RSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAVGTIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQISTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICKRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFV 344

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_NAEGR (Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=TBA1 PE=2 SV=1)

HSP 1 Score: 429.098 bits (1102), Expect = 1.719e-123
Identity = 213/254 (83.86%), Postives = 226/254 (88.98%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF++V                 VDYGKKSKLGFTVYPSPQV+T+VVEPYNSVLSTH+LLEHTDVAV+LDNEAIYDICRRSLDI+RPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML SYAPVISAEKA+HEQLSVAEITNSAF+ +SMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFSSVGGGTGSGLGALLLERLSVDYGKKSKLGFTVYPSPQVATAVVEPYNSVLSTHALLEHTDVAVMLDNEAIYDICRRSLDIQRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLCSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 35.039 bits (79), Expect = 1.719e-123
Identity = 18/31 (58.06%), Postives = 20/31 (64.52%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D  PTGF  G+     TV PGGDL
Sbjct:  338 KRTIQFVDWSPTGFKCGINYQPPTVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA13_NAEGR (Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUBA13 PE=2 SV=1)

HSP 1 Score: 429.098 bits (1102), Expect = 1.719e-123
Identity = 213/254 (83.86%), Postives = 226/254 (88.98%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF++V                 VDYGKKSKLGFTVYPSPQV+T+VVEPYNSVLSTH+LLEHTDVAV+LDNEAIYDICRRSLDI+RPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML SYAPVISAEKA+HEQLSVAEITNSAF+ +SMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFSSVGGGTGSGLGALLLERLSVDYGKKSKLGFTVYPSPQVATAVVEPYNSVLSTHALLEHTDVAVMLDNEAIYDICRRSLDIQRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLCSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 35.039 bits (79), Expect = 1.719e-123
Identity = 18/31 (58.06%), Postives = 20/31 (64.52%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D  PTGF  G+     TV PGGDL
Sbjct:  338 KRTIQFVDWSPTGFKCGINYQPPTVVPGGDL 368

The following BLAST results are available for this feature:

BLAST of EY659187 vs. ExPASy Swiss-Prot

BLAST of EY659187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420


Match Name	E-value	Identity	Description
TBA1_ORYSJ	4.143e-125	84.25	Tubulin alpha-1 chain OS=Oryza sativa subsp. japon...	[more]
TBA1_HORVU	4.143e-125	84.25	Tubulin alpha-1 chain OS=Hordeum vulgare GN=TUBA1 ...	[more]
TBA_TETPY	2.669e-124	82.28	Tubulin alpha chain OS=Tetrahymena pyriformis PE=3...	[more]
TBA_EUGGR	4.545e-124	82.28	Tubulin alpha chain OS=Euglena gracilis GN=TUBA PE...	[more]
TBA_TETTH	4.545e-124	82.28	Tubulin alpha chain OS=Tetrahymena thermophila PE=...	[more]
TBA3_MAIZE	1.318e-123	84.65	Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 PE=2 SV...	[more]
TBA2_CHLRE	1.318e-123	83.86	Tubulin alpha-2 chain OS=Chlamydomonas reinhardtii...	[more]
TBA_DAUCA	1.439e-123	87.80	Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 S...	[more]
TBA1_NAEGR	1.719e-123	83.86	Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=...	[more]
TBA13_NAEGR	1.719e-123	83.86	Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUB...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-101-004-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659187 ID=EY659187; Name=EY659187; organism=Citrus sinensis; type=EST; length=893bp
AACAACTCATCATCGGCAAGGAAGATGCTGCCAACAATTTTGCTCGTGGC
CACTACACAATTGGGAAGGAGATTGTTGATCTATGCTTGGACCGGATCAG
AAAACTTGCTGATAATTGCACTGGGCTACAAGGGTTCCTGGTGTTCAATG
CTGTTGGAGGTGGTACTGGCTCTGGACTTGGGTCACTTCTCTTGGAGCGT
CTCTCTGTTGACTATGGAAAGAAATCAAAGCTTGGTTTCACTGTGTATCC
TTCACCTCAGGTTTCCACATCAGTTGTGGAACCTTACAACAGTGTTCTTT
CAACACATTCCCTCCTTGAGCACACCGATGTTGCTGTGCTTCTTGATAAT
GAAGCCATCTATGATATCTGCAGGCGCTCTCTTGACATTGAGCGCCCCAC
TTACACCAATCTCAACCGACTGGTCTCTCAGGTGATCTCATCCCTTACTG
CTTCTTTGAGGTTTGATGGAGCTCTGAATGTGGATGTGACTGAGTTCCAG
ACCAATTTGGTTCCCTATCCAAGGATCCATTTCATGCTCTCCTCTTATGC
CCCAGTTATCTCTGCTGAGAAGGCATTCCATGAGCAACTTTCAGTTGCTG
AGATCACCAACAGTGCTTTTGATGCATCATCCATGATGGCCAAATGTGAC
CCTCGTCATGGCAAGTACATGGCCTGCTGCTTGATGTATCGTGGTGATNG
TGTGCCTAAGGATGTGAATGCAGCTGTGGGCACCATCAAGACCAGCGCAC
AATTCAGTTTGGTGACTGTTGCCCTACTGGATTCAGTGCCGGATTAACTA
TCAGCACAACTGTGGGCCCTGGTGGGGACCTGCCAAGTGCAAAGGGCTGC
CTGCTGATTTCAACTCCACAACGTGGTGAATGGGTTTTTGCCT