EY659187

Overview
NameEY659187
Unique NameEY659187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_PELFA (Tubulin alpha-1 chain OS=Pelvetia fastigiata GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 399.823 bits (1026), Expect = 1.619e-115
Identity = 195/254 (76.77%), Postives = 215/254 (84.65%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            Q+I GKEDAANN+ARGHYTIGKEIVD+ LDRIRKL+DNCTGLQGFLVF+A                  VDYG+KSKL F + P+PQV+T+VVEPYNSVLSTH+LLEHTD    LDNEA+YD+CRR+LDIERPTYTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKA+HEQLSVAEITNS F+ + MM KCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QIISGKEDAANNYARGHYTIGKEIVDIVLDRIRKLSDNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 37.7354 bits (86), Expect = 1.619e-115
Identity = 20/44 (45.45%), Postives = 26/44 (59.09%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +RTIQF D CPTGF  G+     T  PGGDL   +   C++ +T
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPTAVPGGDLARVQRAVCMVANT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_STYLE (Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 400.593 bits (1028), Expect = 6.124e-115
Identity = 203/254 (79.92%), Postives = 214/254 (84.25%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD CTGLQGFLVFN+V                 VDYGKKSKLGFTVYPSPQVST+VVEPYNSVLSTHSLLEHTDVAV+LDNEA+YDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYP +        P   AEKA+HEQLSVAEITNSAF+ +SMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADQCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPSV-----IIRPSTPAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 339

HSP 2 Score: 35.039 bits (79), Expect = 6.124e-115
Identity = 17/30 (56.67%), Postives = 19/30 (63.33%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGD 829
            +RTIQF D CPTGF  G+     TV P GD
Sbjct:  333 KRTIQFVDWCPTGFKCGINYQPPTVVPSGD 362
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1B_RAT (Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tuba1b PE=1 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.143e-113
Identity = 187/254 (73.62%), Postives = 216/254 (85.04%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 1.143e-113
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1B_PIG (Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.143e-113
Identity = 187/254 (73.62%), Postives = 216/254 (85.04%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 1.143e-113
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1B_PANTR (Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.143e-113
Identity = 187/254 (73.62%), Postives = 216/254 (85.04%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 1.143e-113
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1B_MOUSE (Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b PE=1 SV=2)

HSP 1 Score: 392.504 bits (1007), Expect = 1.143e-113
Identity = 187/254 (73.62%), Postives = 216/254 (85.04%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 1.143e-113
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1B_MERUN (Tubulin alpha-1B chain OS=Meriones unguiculatus GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.143e-113
Identity = 187/254 (73.62%), Postives = 216/254 (85.04%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 1.143e-113
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1B_MACFA (Tubulin alpha-1B chain OS=Macaca fascicularis GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.143e-113
Identity = 187/254 (73.62%), Postives = 216/254 (85.04%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 1.143e-113
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1B_HUMAN (Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B PE=1 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.143e-113
Identity = 187/254 (73.62%), Postives = 216/254 (85.04%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 1.143e-113
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1B_CRIGR (Tubulin alpha-1B chain OS=Cricetulus griseus GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.143e-113
Identity = 187/254 (73.62%), Postives = 216/254 (85.04%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 1.143e-113
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
The following BLAST results are available for this feature:
BLAST of EY659187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420
Match NameE-valueIdentityDescription
TBA1_PELFA1.619e-11576.77Tubulin alpha-1 chain OS=Pelvetia fastigiata GN=TU... [more]
TBA1_STYLE6.124e-11579.92Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 S... [more]
TBA1B_RAT1.143e-11373.62Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tub... [more]
TBA1B_PIG1.143e-11373.62Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=... [more]
TBA1B_PANTR1.143e-11373.62Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1... [more]
TBA1B_MOUSE1.143e-11373.62Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b P... [more]
TBA1B_MERUN1.143e-11373.62Tubulin alpha-1B chain OS=Meriones unguiculatus GN... [more]
TBA1B_MACFA1.143e-11373.62Tubulin alpha-1B chain OS=Macaca fascicularis GN=T... [more]
TBA1B_HUMAN1.143e-11373.62Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B P... [more]
TBA1B_CRIGR1.143e-11373.62Tubulin alpha-1B chain OS=Cricetulus griseus GN=TU... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659187 ID=EY659187; Name=EY659187; organism=Citrus sinensis; type=EST; length=893bp
AACAACTCATCATCGGCAAGGAAGATGCTGCCAACAATTTTGCTCGTGGC
CACTACACAATTGGGAAGGAGATTGTTGATCTATGCTTGGACCGGATCAG
AAAACTTGCTGATAATTGCACTGGGCTACAAGGGTTCCTGGTGTTCAATG
CTGTTGGAGGTGGTACTGGCTCTGGACTTGGGTCACTTCTCTTGGAGCGT
CTCTCTGTTGACTATGGAAAGAAATCAAAGCTTGGTTTCACTGTGTATCC
TTCACCTCAGGTTTCCACATCAGTTGTGGAACCTTACAACAGTGTTCTTT
CAACACATTCCCTCCTTGAGCACACCGATGTTGCTGTGCTTCTTGATAAT
GAAGCCATCTATGATATCTGCAGGCGCTCTCTTGACATTGAGCGCCCCAC
TTACACCAATCTCAACCGACTGGTCTCTCAGGTGATCTCATCCCTTACTG
CTTCTTTGAGGTTTGATGGAGCTCTGAATGTGGATGTGACTGAGTTCCAG
ACCAATTTGGTTCCCTATCCAAGGATCCATTTCATGCTCTCCTCTTATGC
CCCAGTTATCTCTGCTGAGAAGGCATTCCATGAGCAACTTTCAGTTGCTG
AGATCACCAACAGTGCTTTTGATGCATCATCCATGATGGCCAAATGTGAC
CCTCGTCATGGCAAGTACATGGCCTGCTGCTTGATGTATCGTGGTGATNG
TGTGCCTAAGGATGTGAATGCAGCTGTGGGCACCATCAAGACCAGCGCAC
AATTCAGTTTGGTGACTGTTGCCCTACTGGATTCAGTGCCGGATTAACTA
TCAGCACAACTGTGGGCCCTGGTGGGGACCTGCCAAGTGCAAAGGGCTGC
CTGCTGATTTCAACTCCACAACGTGGTGAATGGGTTTTTGCCT
back to top