EY659187

Overview
NameEY659187
Unique NameEY659187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA2_PATVU (Tubulin alpha-2/alpha-4 chain OS=Patella vulgata GN=TUB2 PE=2 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 3.631e-112
Identity = 180/254 (70.87%), Postives = 214/254 (84.25%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYT+GKEI+DL LDRIRKLAD CTGLQGFL+F++                  VDYGKKSKL F +YP+PQ+ST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQL+VAEITN+ F+ ++ M KCDPRHGKYM+CC++YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMSCCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344

HSP 2 Score: 40.4318 bits (93), Expect = 3.631e-112
Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +RTIQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_APLCA (Tubulin alpha-1 chain OS=Aplysia californica PE=2 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 3.631e-112
Identity = 181/254 (71.26%), Postives = 215/254 (84.65%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYT+GKE++DL LDRIRKLAD CTGLQGFL+F++                  VDYGKKSKL F+VYP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP+YTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ + KCDPRHGKYMACC++YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQLVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344

HSP 2 Score: 40.4318 bits (93), Expect = 3.631e-112
Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +RTIQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA_BOMMO (Tubulin alpha chain OS=Bombyx mori PE=2 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 4.738e-112
Identity = 184/254 (72.44%), Postives = 212/254 (83.46%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F++                  VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIE PTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACC++YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEPPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344

HSP 2 Score: 40.4318 bits (93), Expect = 4.738e-112
Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +RTIQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_PARLI (Tubulin alpha-1 chain OS=Paracentrotus lividus PE=2 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 4.738e-112
Identity = 180/254 (70.87%), Postives = 214/254 (84.25%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYT+GKE++D+ LDRIRKLAD CTGLQGFL+F++                  VDYGKKSKL F VYP+PQ+ST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQL+V+EITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFV 344

HSP 2 Score: 40.4318 bits (93), Expect = 4.738e-112
Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +RTIQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA4A_RAT (Tubulin alpha-4A chain OS=Rattus norvegicus GN=Tuba4a PE=2 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 6.182e-112
Identity = 184/254 (72.44%), Postives = 214/254 (84.25%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+D  LDRIRKL+D CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+  IKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 6.182e-112
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA4A_MOUSE (Tubulin alpha-4A chain OS=Mus musculus GN=Tuba4a PE=1 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 6.182e-112
Identity = 184/254 (72.44%), Postives = 214/254 (84.25%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+D  LDRIRKL+D CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+  IKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 6.182e-112
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA4A_MACFA (Tubulin alpha-4A chain OS=Macaca fascicularis GN=TUBA4A PE=2 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 6.182e-112
Identity = 184/254 (72.44%), Postives = 214/254 (84.25%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+D  LDRIRKL+D CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+  IKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 6.182e-112
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA4A_HUMAN (Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=1 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 6.182e-112
Identity = 184/254 (72.44%), Postives = 214/254 (84.25%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+D  LDRIRKL+D CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+  IKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 6.182e-112
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA4A_BOVIN (Tubulin alpha-4A chain OS=Bos taurus GN=TUBA4A PE=1 SV=2)

HSP 1 Score: 386.726 bits (992), Expect = 6.182e-112
Identity = 184/254 (72.44%), Postives = 214/254 (84.25%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+D  LDRIRKL+D CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+  IKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 6.182e-112
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
[Close]
BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBAT_ONCMY (Tubulin alpha chain, testis-specific OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 8.066e-112
Identity = 182/254 (71.65%), Postives = 212/254 (83.46%), Query Frame = 3 
Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEIVDL LDR+RKL+D CTGLQGFL+F++                  VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HE LSVAEITN+ F+ ++ M KCDPRHGKYMACC++YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344

HSP 2 Score: 40.4318 bits (93), Expect = 8.066e-112
Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 2 
Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +RTIQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
The following BLAST results are available for this feature:
BLAST of EY659187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420
Match NameE-valueIdentityDescription
TBA2_PATVU3.631e-11270.87Tubulin alpha-2/alpha-4 chain OS=Patella vulgata G... [more]
TBA1_APLCA3.631e-11271.26Tubulin alpha-1 chain OS=Aplysia californica PE=2 ... [more]
TBA_BOMMO4.738e-11272.44Tubulin alpha chain OS=Bombyx mori PE=2 SV=1[more]
TBA1_PARLI4.738e-11270.87Tubulin alpha-1 chain OS=Paracentrotus lividus PE=... [more]
TBA4A_RAT6.182e-11272.44Tubulin alpha-4A chain OS=Rattus norvegicus GN=Tub... [more]
TBA4A_MOUSE6.182e-11272.44Tubulin alpha-4A chain OS=Mus musculus GN=Tuba4a P... [more]
TBA4A_MACFA6.182e-11272.44Tubulin alpha-4A chain OS=Macaca fascicularis GN=T... [more]
TBA4A_HUMAN6.182e-11272.44Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A P... [more]
TBA4A_BOVIN6.182e-11272.44Tubulin alpha-4A chain OS=Bos taurus GN=TUBA4A PE=... [more]
TBAT_ONCMY8.066e-11271.65Tubulin alpha chain, testis-specific OS=Oncorhynch... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659187 ID=EY659187; Name=EY659187; organism=Citrus sinensis; type=EST; length=893bp
AACAACTCATCATCGGCAAGGAAGATGCTGCCAACAATTTTGCTCGTGGC
CACTACACAATTGGGAAGGAGATTGTTGATCTATGCTTGGACCGGATCAG
AAAACTTGCTGATAATTGCACTGGGCTACAAGGGTTCCTGGTGTTCAATG
CTGTTGGAGGTGGTACTGGCTCTGGACTTGGGTCACTTCTCTTGGAGCGT
CTCTCTGTTGACTATGGAAAGAAATCAAAGCTTGGTTTCACTGTGTATCC
TTCACCTCAGGTTTCCACATCAGTTGTGGAACCTTACAACAGTGTTCTTT
CAACACATTCCCTCCTTGAGCACACCGATGTTGCTGTGCTTCTTGATAAT
GAAGCCATCTATGATATCTGCAGGCGCTCTCTTGACATTGAGCGCCCCAC
TTACACCAATCTCAACCGACTGGTCTCTCAGGTGATCTCATCCCTTACTG
CTTCTTTGAGGTTTGATGGAGCTCTGAATGTGGATGTGACTGAGTTCCAG
ACCAATTTGGTTCCCTATCCAAGGATCCATTTCATGCTCTCCTCTTATGC
CCCAGTTATCTCTGCTGAGAAGGCATTCCATGAGCAACTTTCAGTTGCTG
AGATCACCAACAGTGCTTTTGATGCATCATCCATGATGGCCAAATGTGAC
CCTCGTCATGGCAAGTACATGGCCTGCTGCTTGATGTATCGTGGTGATNG
TGTGCCTAAGGATGTGAATGCAGCTGTGGGCACCATCAAGACCAGCGCAC
AATTCAGTTTGGTGACTGTTGCCCTACTGGATTCAGTGCCGGATTAACTA
TCAGCACAACTGTGGGCCCTGGTGGGGACCTGCCAAGTGCAAAGGGCTGC
CTGCTGATTTCAACTCCACAACGTGGTGAATGGGTTTTTGCCT
back to top