EY659187 | Citrus Genome Database

Overview


Name	EY659187
Unique Name	EY659187
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	893

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA3_DROME (Tubulin alpha-3 chain OS=Drosophila melanogaster GN=alphaTub84D PE=1 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 8.066e-112
Identity = 185/254 (72.83%), Postives = 212/254 (83.46%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F++                  VDYGKKSKL F VYP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ F+ ++ M K DPRHGKYMACC++YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344

HSP 2 Score: 40.4318 bits (93), Expect = 8.066e-112
Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +RTIQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA_XENTR (Tubulin alpha chain OS=Xenopus tropicalis GN=tuba PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 8.066e-112
Identity = 184/254 (72.44%), Postives = 214/254 (84.25%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+D  LDRIRKLAD CTGLQGFLVF++                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSV+EITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+  IKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRTIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 8.066e-112
Identity = 21/44 (47.73%), Postives = 26/44 (59.09%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +RTIQF D CPTGF  G+     T  PGGDL   +   C+L +T
Sbjct:  338 KRTIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQRAVCMLSNT 381

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_CHICK (Tubulin alpha-1 chain (Fragment) OS=Gallus gallus PE=1 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 8.070e-112
Identity = 184/254 (72.44%), Postives = 213/254 (83.86%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGF VF++                  VDYGKKSKL F++YP+ QVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+ TIKT      V
Sbjct:   52 QLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPARQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFV 305

HSP 2 Score: 40.4318 bits (93), Expect = 8.070e-112
Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +RTIQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  299 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 342

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2)

HSP 1 Score: 384.03 bits (985), Expect = 1.373e-111
Identity = 183/254 (72.05%), Postives = 213/254 (83.86%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAA+N+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F++                  VDY KKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACC++YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAASNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344

HSP 2 Score: 40.4318 bits (93), Expect = 1.373e-111
Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +RTIQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 1.373e-111
Identity = 190/254 (74.80%), Postives = 214/254 (84.25%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI G EDAANN+ARGHYTIGKEI+++ LDRIRKL +NC+GLQGFL+FN+V                 +DYGKKSKLGFTVYPSPQVST+VVEPYNSVL+THSLLEHTDVAV+LDNEAIY+IC+RSL+IERPTYTNLNRL++QVISS+TASLRFDGALNVD+TEFQTNLVPYPRIHFMLSS APVIS E A HEQ S AEITN+AF+ +SMMAKCDPR GKYMACCLM+RGD  PKDVN +V  IKT      V
Sbjct:   91 QLICGNEDAANNYARGHYTIGKEIIEIALDRIRKLVENCSGLQGFLIFNSVGGGTGSGLGSLLLERLSLDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLATHSLLEHTDVAVVLDNEAIYEICQRSLNIERPTYTNLNRLIAQVISSITASLRFDGALNVDITEFQTNLVPYPRIHFMLSSLAPVISLEMANHEQYSTAEITNAAFEPNSMMAKCDPRRGKYMACCLMFRGDVAPKDVNGSVAAIKTKKTIQFV 344

HSP 2 Score: 35.039 bits (79), Expect = 1.373e-111
Identity = 17/31 (54.84%), Postives = 20/31 (64.52%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            ++TIQF D CPTGF  G+     TV P GDL
Sbjct:  338 KKTIQFVDWCPTGFKCGINYQPPTVVPDGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA3_HOMAM (Tubulin alpha-3 chain OS=Homarus americanus PE=2 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 1.792e-111
Identity = 183/254 (72.05%), Postives = 213/254 (83.86%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEIVD+ LDRIRKLADNC GLQGFL+F++                  VDYGKKSKL F +YP+PQV+T+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSV+EITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADNCAGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFV 344

HSP 2 Score: 37.3502 bits (85), Expect = 1.792e-111
Identity = 21/44 (47.73%), Postives = 26/44 (59.09%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLP--SAKGCLLIST 865
            +R+IQF D CPTGF  G+     T  PGGDL   S   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVSRAVCMLSNT 381

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA_LEPDS (Tubulin alpha chain OS=Lepidoglyphus destructor PE=1 SV=2)

HSP 1 Score: 384.415 bits (986), Expect = 3.050e-111
Identity = 183/254 (72.05%), Postives = 212/254 (83.46%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F++                  VDYGKKSKL F VYP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVIS+EKA+HEQL+V+EITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+  IKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISSEKAYHEQLTVSEITNTCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 3.050e-111
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA_NOTVI (Tubulin alpha chain OS=Notophthalmus viridescens PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 6.776e-111
Identity = 183/254 (72.05%), Postives = 213/254 (83.86%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEI+D  LDR+RKLAD CTGLQGFLVF++                  VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP+YTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+  IKT      V
Sbjct:   91 QLISGKEDAANNYARGHYTIGKEIIDQVLDRMRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFV 344

HSP 2 Score: 37.3502 bits (85), Expect = 6.776e-111
Identity = 20/44 (45.45%), Postives = 26/44 (59.09%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     T  PGGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQRAVCMLSNT 381

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_HOMAM (Tubulin alpha-1 chain OS=Homarus americanus PE=2 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 6.776e-111
Identity = 183/254 (72.05%), Postives = 212/254 (83.46%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANN+ARGHYTIGKEIVD+ LDRIRKLAD CTGLQGFL+F++                  VDYGKKSKL F VYP+PQV+T+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP+YTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+  IKT      V
Sbjct:   91 QLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIANIKTKRTIQFV 344

HSP 2 Score: 38.1206 bits (87), Expect = 6.776e-111
Identity = 22/44 (50.00%), Postives = 26/44 (59.09%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLP--SAKGCLLIST 865
            +RTIQF D CPTGF  G+     TV PG DL   S   C+L +T
Sbjct:  338 KRTIQFVDWCPTGFKVGINYQPPTVVPGADLAKVSRAVCMLSNT 381

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA5_CHICK (Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 1.505e-110
Identity = 184/254 (72.44%), Postives = 212/254 (83.46%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKED ANN+ARGHYTIGKEI+D  LDRIRKLAD CTGLQGFL F++                   DYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITNS F+ ++ M KCDPRHGKYMACCL+YRGD VPKDVNAA+ TIKT      V
Sbjct:   91 QLITGKEDGANNYARGHYTIGKEIIDQVLDRIRKLADQCTGLQGFLCFHSFGGGTGSGFTSLLMERLSGDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFV 344

HSP 2 Score: 35.8094 bits (81), Expect = 1.505e-110
Identity = 20/44 (45.45%), Postives = 26/44 (59.09%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDLPSAKG--CLLIST 865
            +R+IQF D CPTGF  G+     TV  GGDL   +   C+L +T
Sbjct:  338 KRSIQFVDWCPTGFKVGINYQPPTVVAGGDLAKVQRIVCMLSNT 381

The following BLAST results are available for this feature:

BLAST of EY659187 vs. ExPASy Swiss-Prot

BLAST of EY659187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420


Match Name	E-value	Identity	Description
TBA3_DROME	8.066e-112	72.83	Tubulin alpha-3 chain OS=Drosophila melanogaster G...	[more]
TBA_XENTR	8.066e-112	72.44	Tubulin alpha chain OS=Xenopus tropicalis GN=tuba ...	[more]
TBA1_CHICK	8.070e-112	72.44	Tubulin alpha-1 chain (Fragment) OS=Gallus gallus ...	[more]
TBA3E_HUMAN	1.373e-111	72.05	Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E P...	[more]
TBAN_GUITH	1.373e-111	74.80	Tubulin alpha chain, nucleomorph OS=Guillardia the...	[more]
TBA3_HOMAM	1.792e-111	72.05	Tubulin alpha-3 chain OS=Homarus americanus PE=2 S...	[more]
TBA_LEPDS	3.050e-111	72.05	Tubulin alpha chain OS=Lepidoglyphus destructor PE...	[more]
TBA_NOTVI	6.776e-111	72.05	Tubulin alpha chain OS=Notophthalmus viridescens P...	[more]
TBA1_HOMAM	6.776e-111	72.05	Tubulin alpha-1 chain OS=Homarus americanus PE=2 S...	[more]
TBA5_CHICK	1.505e-110	72.44	Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-004-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659187 ID=EY659187; Name=EY659187; organism=Citrus sinensis; type=EST; length=893bp
AACAACTCATCATCGGCAAGGAAGATGCTGCCAACAATTTTGCTCGTGGC
CACTACACAATTGGGAAGGAGATTGTTGATCTATGCTTGGACCGGATCAG
AAAACTTGCTGATAATTGCACTGGGCTACAAGGGTTCCTGGTGTTCAATG
CTGTTGGAGGTGGTACTGGCTCTGGACTTGGGTCACTTCTCTTGGAGCGT
CTCTCTGTTGACTATGGAAAGAAATCAAAGCTTGGTTTCACTGTGTATCC
TTCACCTCAGGTTTCCACATCAGTTGTGGAACCTTACAACAGTGTTCTTT
CAACACATTCCCTCCTTGAGCACACCGATGTTGCTGTGCTTCTTGATAAT
GAAGCCATCTATGATATCTGCAGGCGCTCTCTTGACATTGAGCGCCCCAC
TTACACCAATCTCAACCGACTGGTCTCTCAGGTGATCTCATCCCTTACTG
CTTCTTTGAGGTTTGATGGAGCTCTGAATGTGGATGTGACTGAGTTCCAG
ACCAATTTGGTTCCCTATCCAAGGATCCATTTCATGCTCTCCTCTTATGC
CCCAGTTATCTCTGCTGAGAAGGCATTCCATGAGCAACTTTCAGTTGCTG
AGATCACCAACAGTGCTTTTGATGCATCATCCATGATGGCCAAATGTGAC
CCTCGTCATGGCAAGTACATGGCCTGCTGCTTGATGTATCGTGGTGATNG
TGTGCCTAAGGATGTGAATGCAGCTGTGGGCACCATCAAGACCAGCGCAC
AATTCAGTTTGGTGACTGTTGCCCTACTGGATTCAGTGCCGGATTAACTA
TCAGCACAACTGTGGGCCCTGGTGGGGACCTGCCAAGTGCAAAGGGCTGC
CTGCTGATTTCAACTCCACAACGTGGTGAATGGGTTTTTGCCT