EY659182

Overview
NameEY659182
Unique NameEY659182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2063 contig Csv1_Contig2063:121..686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSKP_CAPAN (Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.180e-61
Identity = 114/146 (78.08%), Postives = 136/146 (93.15%), Query Frame = 1
Query:  127 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            IA+DVT+LIG TP+VYLN IV GCVA IAAKLE+MEPC SVKDRIG+SMI+DAEEKGLI PG++VL+EPTSGNTGIGLAF+AA++GY+LI+TMPASMSLERR++L AFGAELVLTDPA+GMKGAV KAEEI + TP++Y+LQQF+N
Sbjct:   67 IAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMISDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKGMKGAVSKAEEILNNTPDAYILQQFDN 212          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSKP_SOLTU (Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 4.485e-61
Identity = 113/146 (77.40%), Postives = 134/146 (91.78%), Query Frame = 1
Query:  127 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            IA+DVT+LIG TP+VYLN I  GCVA IAAKLE+MEPC SVKDRIG+SMI DAEEKGLI PG++VL+EPTSGNTGIGLAF+AA++GY+LI+TMPASMSLERR++L AFGAELVLTDPA+GMKGAV KAEEI + TP++Y+LQQF+N
Sbjct:   69 IAEDVTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCSVKDRIGFSMIVDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKGMKGAVSKAEEILNNTPDAYILQQFDN 214          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSKP_ARATH (Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 2.226e-60
Identity = 113/146 (77.40%), Postives = 132/146 (90.41%), Query Frame = 1
Query:  127 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            IA +  +LIGKTP+VYLN +V GCVA +AAKLE+MEPC SVKDRIGYSMI DAEEKGLI PG+SVL+E TSGNTGIGLAF+AA+KGY+LI+TMPASMSLERR++L AFGAELVLT+PA+GM GA+QKAEEI  KTPNSY+LQQF+N
Sbjct:   75 IADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLTEPAKGMTGAIQKAEEILKKTPNSYMLQQFDN 220          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSKM_ARATH (Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3)

HSP 1 Score: 228.794 bits (582), Expect = 1.443e-59
Identity = 111/146 (76.03%), Postives = 132/146 (90.41%), Query Frame = 1
Query:  127 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            IA +V++LIGKTP+VYLN I  GCVA IAAKLE+MEPC SVKDRIGYSM+ DAE+KG I PG+SVL+EPTSGNTGIGLAF+AA++GYRLI+TMPASMS+ERR++L AFGAELVLTDPA+GM GAVQKAEEI   TP++Y+LQQF+N
Sbjct:  113 IADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDN 258          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSKP_SPIOL (Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.221e-58
Identity = 109/146 (74.66%), Postives = 132/146 (90.41%), Query Frame = 1
Query:  127 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            IA+DV++LIGKTP+VYLN +  G VA IAAKLE MEPC SVKDRIGYSMI DAE+KG+I PG++ L+EPTSGNTGIGLAF+AAA+GY++ +TMPASMS+ERR++L AFGAELVLTDPA+GMKGAV+KAEEI  KTP+SY+LQQF+N
Sbjct:   67 IAEDVSQLIGKTPMVYLNNVSKGSVANIAAKLESMEPCCSVKDRIGYSMIDDAEQKGVITPGKTTLVEPTSGNTGIGLAFIAAARGYKITLTMPASMSMERRVILKAFGAELVLTDPAKGMKGAVEKAEEILKKTPDSYMLQQFDN 212          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSK4_ARATH (Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 5.871e-53
Identity = 99/146 (67.81%), Postives = 126/146 (86.30%), Query Frame = 1
Query:  127 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            IA+DVT+LIG TP+VYLNR+ DGC+A IAAKLE MEPC SVKDRIG SMI +AE  G I P ++VL+EPT+GNTG+G+AF+AAAKGY+LI+TMPAS+++ERRM+L A GAE+VLT+P +G+KGAV KA+EI  KT N+Y+ QQF+N
Sbjct:   99 IAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGAITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTNPEKGLKGAVDKAKEIVLKTKNAYMFQQFDN 244          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSK_SYNY3 (Cysteine synthase OS=Synechocystis sp. (strain PCC 6803) GN=cysK PE=3 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 2.920e-44
Identity = 89/148 (60.14%), Postives = 119/148 (80.41%), Query Frame = 1
Query:  127 IAKDVTELIGKTPLVYLNRI--VDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            IA ++TELIG+TPLV LNRI  ++GC A+I  KLE M P +SVKDRIG +MI  AE++GLI PG+++LIEPTSGNTGI LA +AAAKGY+LI+TMP +MS ERR +L A+GA+L LT  + GM G +++A+E+ +  PN+Y+LQQF+N
Sbjct:    3 IASNITELIGRTPLVRLNRIPLLEGCGAKIVVKLEGMNPAASVKDRIGINMINRAEQEGLIEPGKTLLIEPTSGNTGIALAMVAAAKGYQLILTMPETMSQERRAMLKAYGAKLELTPGSEGMGGCIRRAQELAESLPNAYMLQQFDN 150          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSK_MYCTU (Cysteine synthase A OS=Mycobacterium tuberculosis GN=cysK PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.603e-42
Identity = 86/146 (58.90%), Postives = 112/146 (76.71%), Query Frame = 1
Query:  127 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            IA+D+T+LIG+TPLV L R+ DG VA I AKLE   P +SVKDRIG +M+  AE+ GLI+P +++++EPTSGNTGI LA + AA+GYR ++TMP +MSLERRM+L A+GAEL+LT  A GM GA+ KAEE+       +V QQFEN
Sbjct:    3 IAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFEN 147          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSK_MYCBO (Cysteine synthase A OS=Mycobacterium bovis GN=cysK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.603e-42
Identity = 86/146 (58.90%), Postives = 112/146 (76.71%), Query Frame = 1
Query:  127 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            IA+D+T+LIG+TPLV L R+ DG VA I AKLE   P +SVKDRIG +M+  AE+ GLI+P +++++EPTSGNTGI LA + AA+GYR ++TMP +MSLERRM+L A+GAEL+LT  A GM GA+ KAEE+       +V QQFEN
Sbjct:    3 IAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFEN 147          
BLAST of EY659182 vs. ExPASy Swiss-Prot
Match: CYSK_MYCLE (Cysteine synthase A OS=Mycobacterium leprae GN=cysK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.947e-41
Identity = 83/146 (56.85%), Postives = 110/146 (75.34%), Query Frame = 1
Query:  127 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFEN 564
            IA+DVT+L+G TPLV L R+ +G +A + AKLE   P +SVKDRIG +MI  AEE GLI+P ++V++EPTSGNTGI LA + AA+GY  ++TMP +MS+ERRM+L A+GAEL+LT  A GM GA+ KAEE+       ++ QQFEN
Sbjct:    3 IAEDVTQLVGNTPLVRLRRVTEGALADVVAKLESFNPANSVKDRIGVAMIDTAEEAGLIKP-DTVILEPTSGNTGIALAMVCAARGYHCVLTMPETMSIERRMLLRAYGAELILTPGADGMSGAIAKAEELAKSDKRYFIPQQFEN 147          
The following BLAST results are available for this feature:
BLAST of EY659182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSKP_CAPAN1.180e-6178.08Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_SOLTU4.485e-6177.40Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_ARATH2.226e-6077.40Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKM_ARATH1.443e-5976.03Cysteine synthase, mitochondrial OS=Arabidopsis th... [more]
CYSKP_SPIOL1.221e-5874.66Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSK4_ARATH5.871e-5367.81Probable cysteine synthase, chloroplastic OS=Arabi... [more]
CYSK_SYNY32.920e-4460.14Cysteine synthase OS=Synechocystis sp. (strain PCC... [more]
CYSK_MYCTU1.603e-4258.90Cysteine synthase A OS=Mycobacterium tuberculosis ... [more]
CYSK_MYCBO1.603e-4258.90Cysteine synthase A OS=Mycobacterium bovis GN=cysK... [more]
CYSK_MYCLE3.947e-4156.85Cysteine synthase A OS=Mycobacterium leprae GN=cys... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-C10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659182 ID=EY659182; Name=EY659182; organism=Citrus sinensis; type=EST; length=566bp
TTGTTTTTCAATTTTCTACTGTTTTCCAGCTGCCTTGACATTGTTTACGA
TTCTTCCCAGAGAAAGCTTTCACGTTCGCTTGTAACTTGAAAAAAAGAAA
AAAAAATGGTGGAGGAGAAGTCCGTGATTGCGAAAGATGTCACTGAATTG
ATTGGTAAAACACCATTGGTGTATCTCAACCGCATTGTGGATGGTTGCGT
TGCTAGAATTGCTGCCAAGCTGGAGATGATGGAACCCTGCTCTAGCGTCA
AAGATAGAATTGGATACAGTATGATCGCTGATGCAGAGGAGAAGGGTCTC
ATTAGACCAGGCGAGAGTGTCCTGATTGAGCCTACCAGCGGTAATACTGG
CATAGGGTTGGCATTCATGGCAGCTGCTAAGGGTTACAGACTTATAATTA
CCATGCCTGCTTCAATGAGTCTTGAAAGAAGAATGGTTCTCCTAGCTTTT
GGAGCTGAGCTTGTGCTCACTGATCCTGCCAGGGGCATGAAGGGAGCTGT
TCAGAAGGCAGAAGAGATAAGGGACAAGACACCGAATTCCTATGTCCTTC
AGCAGTTTGAAAACCC
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