EY659180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL3L_ARATH (RING-H2 finger protein ATL3L OS=Arabidopsis thaliana GN=ATL3L PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.873e-18 Identity = 53/123 (43.09%), Postives = 69/123 (56.10%), Query Frame = 2 Query: 341 LDPAILRKIPVVAFNQQDFKDGLE-CAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVD-----VERSNNGNGEPSV------EIDIQNSQDSLES---GYSTDSPPNFP 664 LDP +L KIP+ ++ + + LE C+VCLSE E+ ++ R+LPKC H FHV+CID WF+S S+CPLCR PV E PSV E +S D ES S+ SP FP Sbjct: 88 LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSSDESESSTPSSSSGSPVRFP 210
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL3A_ARATH (RING-H2 finger protein ATL3A OS=Arabidopsis thaliana GN=ATL3A PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 6.401e-18 Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFNQQD-FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR----------------NPVDVERSNNGNGEPS---VEIDIQNSQDSLE--SGYSTDSPP 655 GLD ++++ I V + + D F + +C+VCLSE ++ E RLLPKCNH FHV CID W +SHS CPLCR + E ++ G+ S V +D++NS+ E + ST PP Sbjct: 133 GLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRSRNETVNEGSTPKPP 260
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL5G_ARATH (Probable RING-H2 finger protein ATL5G OS=Arabidopsis thaliana GN=ATL5G PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.360e-18 Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFNQQD-FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQDS 622 GL+ ++++ I V + D F DG +C+VCLSE E+ E RLLPKCNH FH+ CID W +SHS CPLCR V + + +V + + N +S Sbjct: 116 GLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNS 211
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL3H_ARATH (Putative RING-H2 finger protein ATL3H OS=Arabidopsis thaliana GN=ATL3H PE=5 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.862e-17 Identity = 40/83 (48.19%), Postives = 51/83 (61.45%), Query Frame = 2 Query: 305 PGQDPAVTLRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVD 553 P V G++P++L IPVV+FN FKD +EC VCLS+ D +KAR+LP CNH FH + D W S TCP CR V+ Sbjct: 43 PSHSLHVIKATGINPSVLLSIPVVSFNANAFKDNIECVVCLSKFIDEDKARVLPSCNHCFHFDFTDTWLHSDYTCPNCRKNVE 125
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL5B_ARATH (RING-H2 finger protein ATL5B OS=Arabidopsis thaliana GN=ATL5B PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.149e-17 Identity = 41/97 (42.27%), Postives = 57/97 (58.76%), Query Frame = 2 Query: 299 FAPGQDPAVT---LRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNG 580 F P +DP T + G+ L+ IPV +++ + EC +CL + +GE R+LPKCNHGFHV+CID W SHS+CP CR + +E NG Sbjct: 72 FTPNEDPVDTNANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL-LEHQTPANG 167
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL4J_ARATH (RING-H2 finger protein ATL4J OS=Arabidopsis thaliana GN=ATL4J PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 4.149e-17 Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 2 Query: 335 AGLDPAILRKIPVVAFNQ-QDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSN----NGN 577 +GLD + +P+ F+ + K GL+C+VCLS+ E E RLLPKC H FH+ CID W + H+TCPLCR+ V +E + NGN Sbjct: 96 SGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTNGN 181
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL1B_ARATH (RING-H2 finger protein ATL1B OS=Arabidopsis thaliana GN=ATL1B PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.149e-17 Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = 2 Query: 311 QDPAVTLRAGLDPAILRKIPVVAFNQQ--DFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNG-----------EPSVEIDIQNSQDSLES 631 Q P GL +L+ +P + F+ + + + ECA+CL+E G++ R+LP+C HGFHV CID W SHS+CP CR + V R + G EP +EI I+ +D S Sbjct: 75 QPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSGLESEPEIEIRIKQGEDDPNS 194
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL5F_ARATH (RING-H2 finger protein ATL5F OS=Arabidopsis thaliana GN=ATL5F PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.419e-17 Identity = 45/106 (42.45%), Postives = 57/106 (53.77%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFNQ-QDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPV-------DVERSNNGNGEPSVEIDIQNSQDSLES 631 GL + + I VV F + + DG EC+VCL+E E+ E RLLPKC+H FH+ CID W SH CPLCR PV E N + D++ QDS S Sbjct: 109 GLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQETETNHQPDSESSNDLRGRQDSSRS 214
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL1K_ARATH (RING-H2 finger protein ATL1K OS=Arabidopsis thaliana GN=ATL1K PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.077e-17 Identity = 39/71 (54.93%), Postives = 47/71 (66.20%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFNQQDFKDGL--ECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRN 544 G+ LR PVV+++ + GL EC +CLS+ GE+ RLLPKCNHGFHV CID W Q H TCP CRN Sbjct: 108 GIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRN 178
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL5O_ARATH (RING-H2 finger protein ATL5O OS=Arabidopsis thaliana GN=ATL5O PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.577e-16 Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAF--NQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQDSLESGYSTDSPPN 658 GLD +++ IP+ + N+++ + EC +CL E G+ R L C HGFHVECIDMW SHSTCPLCR+PV S+ N + +V + ++ L+ + ++ N Sbjct: 111 GLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEENLKLAVNAVEEEAEVRLQMSPAGENESN 219 The following BLAST results are available for this feature:
BLAST of EY659180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659180 ID=EY659180; Name=EY659180; organism=Citrus sinensis; type=EST; length=909bpback to top |