EY659180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL1D_ARATH (RING-H2 finger protein ATL1D OS=Arabidopsis thaliana GN=ATL1D PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.973e-15 Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 335 AGLDPAILRKIPVVAFNQ-QDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR 541 +GLD A++ +PV + + + K+ +CAVCL E + +K RLLP C+H FH++CID W S+STCPLCR Sbjct: 117 SGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL4D_ARATH (Putative RING-H2 finger protein ATL4D OS=Arabidopsis thaliana GN=ATL4D PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.883e-15 Identity = 38/104 (36.54%), Postives = 62/104 (59.62%), Query Frame = 2 Query: 329 LRAGLDPAILRKIPVVAFNQ-QDFK---DGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQDSLE 628 +R G+D ++ P +++ + FK G+ECA+CL E ED E R +P C+H FH CID W S STCP+CR + + +S + PS++++ N+Q ++ Sbjct: 88 VRRGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANLSL-KSGDSFPHPSMDVETGNAQRGVQ 190
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL3D_ARATH (RING-H2 finger protein ATL3D OS=Arabidopsis thaliana GN=ATL3D PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.883e-15 Identity = 34/79 (43.04%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFNQQ--DFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSN 568 GLDPA +R +PVV ++ + ++ EC +CL E+GEK ++LP C+H +H EC+D W ++ S+CPLCR + V+ S+ Sbjct: 80 GLDPAEIRSLPVVLCRRERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRVDSSS 158
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL5H_ARATH (RING-H2 finger protein ATL5H OS=Arabidopsis thaliana GN=ATL5H PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 5.072e-15 Identity = 42/103 (40.78%), Postives = 54/103 (52.43%), Query Frame = 2 Query: 326 TLRAGLDPAILRKIPVVAFN----QQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQDS 622 T+ GLD + P ++ Q+ K LECA+CL+E ED E RLLPKC+H FH CI W Q H TCP+CR + E VE D++ Q S Sbjct: 91 TVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNL---AEQTPEPEVVVETDLEAQQQS 190
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL3B_ARATH (RING-H2 finger protein ATL3B OS=Arabidopsis thaliana GN=ATL3B PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 5.072e-15 Identity = 40/96 (41.67%), Postives = 55/96 (57.29%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFN----QQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR-----NPVDVERSNNGNGEPSVEI 598 GLD +++ P ++ Q+ K LECA+CL+E ED E RLLPKC+H FH CID W ++H TCP+CR + E G EP +E+ Sbjct: 99 GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEPGGTEPDLEL 194
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL4K_ARATH (RING-H2 finger protein ATL4K OS=Arabidopsis thaliana GN=ATL4K PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 6.624e-15 Identity = 43/109 (39.45%), Postives = 66/109 (60.55%), Query Frame = 2 Query: 335 AGLDPAILRKIPVVAFNQQ-DFKD-GLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQD--SLESGYSTDS 649 +G+D + + +PV + K+ +CAVCL E E +K RLLPKC+H FH++CID W SHSTCPLCR+ + + S++ + S + ++++ D S E G DS Sbjct: 106 SGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDS 214
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL4F_ARATH (RING-H2 finger protein ATL4F OS=Arabidopsis thaliana GN=ATL4F PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.130e-14 Identity = 40/124 (32.26%), Postives = 62/124 (50.00%), Query Frame = 2 Query: 299 FAPGQDPAVTLRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR------NPVDVER---------SNNGNGEPSVEIDIQNSQDSL 625 F P + T GL I +P+V + + + +C+VCL + + EK + +P C H FH+ECID+W SH+TCPLCR VD+ N GE S + D Q++ +++ Sbjct: 59 FVPTNNNLSTAELGLSKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSVDLSHQSIEIVSSIENTNGGEASTQPDSQSATEAI 182
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL2E_ARATH (RING-H2 finger protein ATL2E OS=Arabidopsis thaliana GN=ATL2E PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.130e-14 Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 2 Query: 326 TLRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQDSLESGYSTD 646 + R GLD +R +PV + + + +C +CLS+ E+GE +++P C H FHV+C+D W S+ TCPLCR+ + G EP QDS E + D Sbjct: 111 SFRRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKDLGMQEPP-------DQDSAEEHDTCD 210
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL2C_ARATH (Putative RING-H2 finger protein ATL2C OS=Arabidopsis thaliana GN=ATL2C PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.130e-14 Identity = 41/98 (41.84%), Postives = 59/98 (60.20%), Query Frame = 2 Query: 335 AGLDPAILRKIPVVAFNQ-QDFK-DGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQDS 622 +G+D +++ +PV + K +C VCL E E +K RLLPKC+H FHVECID W SHSTCPLCR+ + S++ N S + +++ Q S Sbjct: 98 SGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLSSSYLLVLESEQSS 195
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL4E_ARATH (RING-H2 finger protein ATL4E OS=Arabidopsis thaliana GN=ATL4E PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.476e-14 Identity = 40/124 (32.26%), Postives = 62/124 (50.00%), Query Frame = 2 Query: 299 FAPGQDPAVTLRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERS---------------NNGNGEPSVEIDIQNSQDSL 625 F P + T GL I +PVV + + +C+VCL + + EK + +P C H FH+ECID+W SH+TCPLCR + + S N+ GE S + D Q++ +++ Sbjct: 73 FVPTNNNLSTAELGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQSATEAI 196 The following BLAST results are available for this feature:
BLAST of EY659180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659180 ID=EY659180; Name=EY659180; organism=Citrus sinensis; type=EST; length=909bpback to top |