EY659180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL4C_ARATH (Putative RING-H2 finger protein ATL4C OS=Arabidopsis thaliana GN=ATL4C PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.476e-14 Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = 2 Query: 302 APGQDPAVT-LRAGLDPAILRKIPVVAFNQ----QDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQ 607 A GQD + R GL+ ++ P +++ + K G+ECA+CLSE ED E R +P C+H FH CID+W S STCP+CR + ++ G P + +D++ Sbjct: 81 AAGQDVLHSRARRGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLK---PGESYPYLNMDVE 184
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL2F_ARATH (RING-H2 finger protein ATL2F OS=Arabidopsis thaliana GN=ATL2F PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.476e-14 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 2 Query: 320 AVTLRAGLDPAILRKIPVVAFNQQDFK----DGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR 541 ++T GLD AI+ P +++ + G+ECAVC+ E ED E RL+P+C H FH +C+ +W HSTCPLCR Sbjct: 61 SITAVRGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCR 138
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL1N_ARATH (RING-H2 finger protein ATL1N OS=Arabidopsis thaliana GN=ATL1N PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.476e-14 Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFNQQDF----KDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR 541 GLD +I+ P ++ K+ LEC+VCL+E ED E RL+PKC H FH CID W +SH+TCPLCR Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCR 186
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL1G_ARATH (RING-H2 finger protein ATL1G OS=Arabidopsis thaliana GN=ATL1G PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.476e-14 Identity = 39/131 (29.77%), Postives = 63/131 (48.09%), Query Frame = 2 Query: 299 FAPGQDPAVTLRAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGE-------PSVEIDIQNSQDSLESGYSTDSPPNFPTN 670 F PG + T+ GL + +P+V F + +C+VCL + + +K + +P C H FH++CID+W SH+TCPLCR + RS + P E+ Q + + + P + P N Sbjct: 63 FIPGNSLS-TIELGLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLALIPSRSRQSQDDPVPSLVSPDEEVSSQPESEPVNHRVVSTQPESEPVN 192
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL1O_ARATH (RING-H2 finger protein ATL1O OS=Arabidopsis thaliana GN=ATL1O PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.927e-14 Identity = 38/99 (38.38%), Postives = 53/99 (53.54%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFNQQD-FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVEIDIQNSQDSLES 631 GL +I+ I + + + D + +C VCL+E E+ E RLLPKCNH FH+ CID W SH+ CPLCR + + VE+ S LE+ Sbjct: 151 GLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLEN 249
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL1F_ARATH (RING-H2 finger protein ATL1F OS=Arabidopsis thaliana GN=ATL1F PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.517e-14 Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVE-RSNNGNGEPSVEIDIQNSQ 616 GLD I+ P ++ +D +C++CL+E D + RL+ CNH FH CID+WF+ H TCP+CR +DVE R++ EID+ S+ Sbjct: 130 GLDSKIIESFPEYPYSVKDHGTD-QCSICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCRRELDVEDRTSLEKPLEVPEIDLVRSE 222
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL4I_ARATH (Putative RING-H2 finger protein ATL4I OS=Arabidopsis thaliana GN=ATL4I PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14 Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 2 Query: 311 QDPAVTLRAGLDPAILRKIPVVAFNQ----QDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNGNGEPSVE---ID-IQNSQDSLESGY 637 Q A + GL+ I+ P ++ ++ K GLECA+CL E + RLL C H FH ECID+WF+SH TCP+CR +D N +P+V+ ID IQ + D E + Sbjct: 72 QPEAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFESHRTCPVCRRDLDPPPPPE-NTKPTVDEMIIDVIQETSDDEEDDH 187
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL2K_ARATH (RING-H2 finger protein ATL2K OS=Arabidopsis thaliana GN=ATL2K PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14 Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 2 Query: 332 RAGLDPAILRKIPVVAFNQQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVD 553 + GLD ++ +P ++ G ECAVCLS LE+ + AR+LP C H FHV C+D W + STCP+CR + Sbjct: 73 KRGLDSLVIASLPTFVVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAE 146
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL3J_ARATH (RING-H2 finger protein ATL3J OS=Arabidopsis thaliana GN=ATL3J PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.608e-14 Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 2 Query: 350 AILRKIPVVAFN----QQDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNP-----------VDVERSNNGNGEPSVEIDI 604 ++L +P+ F+ + + +CAVCLS+ E ++ RLLP C H FH +CID+W S+ TCPLCR+P + V SNNG GE S ++I Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEI 191
BLAST of EY659180 vs. ExPASy Swiss-Prot
Match: ATL1H_ARATH (RING-H2 finger protein ATL1H OS=Arabidopsis thaliana GN=ATL1H PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.565e-14 Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 2 Query: 338 GLDPAILRKIPVVAFNQ----QDFKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR 541 GL ++ P ++Q + K G+ECA+CL+E ED E RL+P C+H FH CID+W S STCP+CR Sbjct: 99 GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCR 170 The following BLAST results are available for this feature:
BLAST of EY659180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659180 ID=EY659180; Name=EY659180; organism=Citrus sinensis; type=EST; length=909bpback to top |