EY659175

Overview
NameEY659175
Unique NameEY659175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5B_MOUSE (Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.255e-19
Identity = 40/81 (49.38%), Postives = 59/81 (72.84%), Query Frame = 2
Query:   50 HQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPRK 292
            ++ ++VA  N  ++ W++I G+VYD++ F+ +HPGG+EVL+  AG DAT  FE VGHS  AREM+ +YYIGD+ PS +  K
Sbjct:   23 YRLEEVAKRNSAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPSDLKPK 103          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5B_RAT (Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.652e-19
Identity = 39/81 (48.15%), Postives = 59/81 (72.84%), Query Frame = 2
Query:   50 HQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPRK 292
            ++ ++VA  N  ++ W++I G+VYD++ F+ +HPGG+EVL+  AG DAT  FE VGHS  AREM+ +YYIGD+ P+ +  K
Sbjct:   23 YRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPNDLKPK 103          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_DROME (Cytochrome b5 OS=Drosophila melanogaster GN=Cyt-b5 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.770e-19
Identity = 41/69 (59.42%), Postives = 55/69 (79.71%), Query Frame = 2
Query:   62 QVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            +VA HN  KD WL+I   +YDV++F+++HPGG+EVLI  AGKDAT +FE VGHS+ AR+MM KY IG++
Sbjct:   13 EVAKHNTNKDTWLLIHNNIYDVTAFLNEHPGGEEVLIEQAGKDATENFEDVGHSNDARDMMKKYKIGEL 81          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_YEAST (Cytochrome b5 OS=Saccharomyces cerevisiae GN=CYB5 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 5.274e-18
Identity = 41/99 (41.41%), Postives = 62/99 (62.63%), Query Frame = 2
Query:   41 PXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDK 337
            P ++ + +VA HN  ++ W+II  KVYDVS F D+HPGGDE+++   G+DAT  F  +GHSD A  ++   YIGD+D ++   +R  +     + NQ K
Sbjct:    2 PKVYSYQEVAEHNGPENFWIIIDDKVYDVSQFKDEHPGGDEIIMDLGGQDATESFVDIGHSDEALRLLKGLYIGDVDKTS---ERVSVEKVSTSENQSK 97          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_RHIST (Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.274e-18
Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 2
Query:   47 IHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPST 280
            I   D+V+ H    D W++I  KVYD++ F+ +HPGG+EVL+   GKDAT  FE +GHSD AREM+++Y IG +D ++
Sbjct:    5 IFSLDEVSKHKTKSDLWVVIHNKVYDITRFVVEHPGGEEVLVDEGGKDATEAFEDIGHSDEAREMLEEYLIGSLDEAS 82          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB51_SCHPO (Probable cytochrome b5 1 OS=Schizosaccharomyces pombe GN=SPBC29A10.16c PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.274e-18
Identity = 40/95 (42.11%), Postives = 67/95 (70.53%), Query Frame = 2
Query:   59 DQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTP 343
            +++  HN +KD +++I+GKVYDVS+F DDHPGG ++++  AG+DAT  ++ +GHS +A E++++ YIGD+ P T  R +    L++P    + TP
Sbjct:    9 EEIVEHNNSKDMYMVINGKVYDVSNFADDHPGGLDIMLDYAGQDATKAYQDIGHSIAADELLEEMYIGDLKPGTEERLK---ELKKPRSFDNDTP 100          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_CANTR (Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.418e-17
Identity = 35/74 (47.30%), Postives = 57/74 (77.03%), Query Frame = 2
Query:   47 IHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            I+  ++VA H    D W+I++GKVY++S+++D+HPGG+EV++  AG DAT  F+ +GHSD A E+++K YIG++
Sbjct:   10 IYTHEEVAQHTTHDDLWVILNGKVYNISNYIDEHPGGEEVILDCAGTDATEAFDDIGHSDEAHEILEKLYIGNL 83          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_MUSDO (Cytochrome b5 OS=Musca domestica GN=Cyt-b5 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 2
Query:   62 QVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIP-LEQPAYNQDKTPE 346
            +VA +N     W II   VYDV++F+++HPGG+EVLI  AGKDAT  FE VGHS  AREMM +Y +G++    V  +R+ +P   +P +N ++  E
Sbjct:   13 EVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGEL----VAEERSNVPEKSEPTWNTEQKTE 104          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_ALOSE (Cytochrome b5 (Fragment) OS=Alouatta seniculus GN=CYB5A PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 2
Query:   50 HQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPR 289
            +  +++  HN +K  WLI+  KVYD++ F+++HPGG+EVL   AG DAT DFE VGHS  ARE+   Y IG++ P   P+
Sbjct:    8 YTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATEDFEDVGHSTDARELSKTYIIGELHPDDRPK 87          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB52_SCHPO (Probable cytochrome b5 2 OS=Schizosaccharomyces pombe GN=SPCC16A11.10c PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.697e-16
Identity = 34/70 (48.57%), Postives = 54/70 (77.14%), Query Frame = 2
Query:   59 DQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            ++V  HN   D ++++  KVYD+S F+D HPGG+EVL+  AG+DA+  FE VGHS+ A+E+++K+YIG++
Sbjct:    9 EEVLKHNTRDDLYIVVKDKVYDISKFLDAHPGGEEVLVDLAGRDASGPFEDVGHSEDAQELLEKFYIGNL 78          
The following BLAST results are available for this feature:
BLAST of EY659175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CYB5B_MOUSE1.255e-1949.38Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1... [more]
CYB5B_RAT3.652e-1948.15Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b... [more]
CYB5_DROME4.770e-1959.42Cytochrome b5 OS=Drosophila melanogaster GN=Cyt-b5... [more]
CYB5_YEAST5.274e-1841.41Cytochrome b5 OS=Saccharomyces cerevisiae GN=CYB5 ... [more]
CYB5_RHIST5.274e-1848.72Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1[more]
CYB51_SCHPO5.274e-1842.11Probable cytochrome b5 1 OS=Schizosaccharomyces po... [more]
CYB5_CANTR3.418e-1747.30Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 ... [more]
CYB5_MUSDO5.831e-1745.83Cytochrome b5 OS=Musca domestica GN=Cyt-b5 PE=1 SV... [more]
CYB5_ALOSE5.831e-1747.50Cytochrome b5 (Fragment) OS=Alouatta seniculus GN=... [more]
CYB52_SCHPO1.697e-1648.57Probable cytochrome b5 2 OS=Schizosaccharomyces po... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659175 ID=EY659175; Name=EY659175; organism=Citrus sinensis; type=EST; length=957bp
TTTAAAAGACCGACCCACGCGTCCGCAAATGGCCTTATATCCAAANATTC
ACCAGTTCGACCAGGTCGCCACGCACAACAAAACTAAGGATTGCTGGCTT
ATTATTTCTGGCAAGGTGTATGATGTGTCCTCGTTCATGGATGATCACCC
TGGAGGAGATGAGGTTTTGATTTCTGCAGCTGGGAAAGATGCAACAAATG
ACTTTGAATATGTGGGTCACAGTGACTCCGCTAGGGAGATGATGGACAAG
TACTATATTGGTGACATTGATCCCTCAACTGTTCCTCGGAAACGTGCATA
TATTCCACTGGAGCAACCTGCTTACAATCAAGACAAGACCCCTGAGTTCA
TTATTAAGATTCTACAGATTCTTGTGCCGCTCTTGATATTGGGTTTAGCC
TTTGTGGTCAGACTCTATACCAAGAAAGAGTGGGTGGCCTTCTCAATAAA
ATGAGTCATCTCCGGAATGGGAAGCTGGTGATTTGCATGAGCTTAGTTCT
AGGACATTGATCTCTTATTTACTTTCCTATGGGGGTTGGTTCTGCTGAAA
TTGAATAGTGGTTCGGTGTCCACCAGAGACCATATTGGCTGTCTTCTCTT
GAGTGGCTTGCTCCTAATGTTTTTCATTGGTGGCCACGGGATAATGTTGA
TTTTTATTGGATCCCTGGATGGAATGCAAGGCATGTTTTTCCTTCTGATC
GAACGCTTTTTCCTGACGAGGGTATTCGTCTTTTATTGGCGGGCGGTATT
ATTCTCCTCCGGTGCTTCATGTTTAAAAAAAAAAAAAAAAGGGCCGGGCG
CCTTAGAGATCCAGCCTTCTTGCCCGCGCGTTCCACGCCTACCTCTTGTT
TTGGTTCCTAAATTAATTATTGGCCTGGCTTTACCCCGGGGACTGGGAAA
ACCTGGCGTCCCCCCTTATCGGCCTGGCCAATTCCCTTTCACCGTGGAGG
AAAAAAA
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