EY659175

Overview
NameEY659175
Unique NameEY659175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_HUMAN (Cytochrome b5 OS=Homo sapiens GN=CYB5A PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.894e-16
Identity = 37/80 (46.25%), Postives = 54/80 (67.50%), Query Frame = 2
Query:   50 HQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPR 289
            +  +++  HN +K  WLI+  KVYD++ F+++HPGG+EVL   AG DAT +FE VGHS  AREM   + IG++ P   P+
Sbjct:   12 YTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREMSKTFIIGELHPDDRPK 91          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA_VOLCA (Nitrate reductase [NADH] OS=Volvox carteri GN=NITA PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.447e-16
Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 2
Query:   41 PXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQP 319
            P  +  ++VA HN  + CW +  GKVYD + ++D+HPGG E ++  AG DAT++F  + HS  A+ M+ +YYIGD+  S      A +P  QP
Sbjct:  497 PRQYTMEEVAAHNTEESCWFVHGGKVYDATPYLDEHPGGAESILIVAGADATDEFNSI-HSSKAKAMLAQYYIGDLVASKPAAAGATVPEPQP 588          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_NEUCR (Probable cytochrome b5 OS=Neurospora crassa GN=B23L21.190 PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 8.420e-16
Identity = 38/85 (44.71%), Postives = 58/85 (68.24%), Query Frame = 2
Query:   56 FDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDID-PSTVPRKRAYIP 307
            +  VA HN  KD +++I  KVYD++ F+D+HPGG+EVL+  AG+D+T  FE VGHSD ARE ++   +G +   +  P+ +A +P
Sbjct:    7 YQDVAEHNTKKDLYVVIHDKVYDITKFVDEHPGGEEVLLDVAGQDSTEAFEDVGHSDEAREALEPLLVGTLKRQAGDPKPKAPLP 91          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_CHICK (Cytochrome b5 OS=Gallus gallus GN=CYB5A PE=1 SV=4)

HSP 1 Score: 84.7297 bits (208), Expect = 8.420e-16
Identity = 36/91 (39.56%), Postives = 60/91 (65.93%), Query Frame = 2
Query:   50 HQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPA 322
            ++ ++V  HN ++  W+I+  ++YD++ F+D+HPGG+EVL   AG DAT +FE VGHS  AR + + + IG++ P   P+      L++PA
Sbjct:   17 YRLEEVQKHNNSQSTWIIVHHRIYDITKFLDEHPGGEEVLREQAGGDATENFEDVGHSTDARALSETFIIGELHPDDRPK------LQKPA 101          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_HORSE (Cytochrome b5 OS=Equus caballus GN=CYB5A PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 1.100e-15
Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 2
Query:   50 HQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDP 274
            +  +++  HN +K  WLI+  KVYD++ F++DHPGG+EVL   AG DAT +FE +GHS  ARE+   + IG++ P
Sbjct:   12 YTLEEIKKHNHSKSTWLILHHKVYDLTKFLEDHPGGEEVLREQAGGDATENFEDIGHSTDARELSKTFIIGELHP 86          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_BOVIN (Cytochrome b5 OS=Bos taurus GN=CYB5A PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.436e-15
Identity = 40/100 (40.00%), Postives = 59/100 (59.00%), Query Frame = 2
Query:   50 HQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTPEF 349
            +  +++  HN +K  WLI+  KVYD++ F+++HPGG+EVL   AG DAT +FE VGHS  ARE+   + IG++ P    R +   P E      D  P +
Sbjct:   12 YTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPD--DRSKITKPSESIITTIDSNPSW 109          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_RABIT (Cytochrome b5 OS=Oryctolagus cuniculus GN=CYB5A PE=1 SV=4)

HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-15
Identity = 38/88 (43.18%), Postives = 57/88 (64.77%), Query Frame = 2
Query:   50 HQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLE 313
            +  +++  HN +K  WLI+  KVYD++ F+++HPGG+EVL   AG DAT +FE VGHS  ARE+   + IG++ P    R +   P+E
Sbjct:   12 YTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPD--DRSKLSKPME 97          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_PIG (Cytochrome b5 OS=Sus scrofa GN=CYB5A PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-15
Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 2
Query:   50 HQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDP 274
            +  +++  HN +K  WLI+  KVYD++ F+++HPGG+EVL   AG DAT +FE VGHS  ARE+   + IG++ P
Sbjct:   12 YTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHP 86          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_MORAP (Cytochrome b5 OS=Mortierella alpina PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.458e-15
Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 2
Query:   65 VATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIP 307
            ++ H      +L I GKVYD + F+D+HPGG+EVLI  AG+DAT  FE VGHSD AR++M K  +G+    +  + +A  P
Sbjct:   12 LSQHTTKDSLYLAIHGKVYDCTGFIDEHPGGEEVLIDEAGRDATESFEDVGHSDEARDIMSKLLVGEFKTDSSEKPKAKSP 92          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_RAT (Cytochrome b5 OS=Rattus norvegicus GN=Cyb5a PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 9.309e-15
Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 2
Query:   50 HQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDP 274
            +  +++  H  +K  W+I+  KVYD++ F+++HPGG+EVL   AG DAT +FE VGHS  ARE+   Y IG++ P
Sbjct:   12 YTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGELHP 86          
The following BLAST results are available for this feature:
BLAST of EY659175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CYB5_HUMAN2.894e-1646.25Cytochrome b5 OS=Homo sapiens GN=CYB5A PE=1 SV=2[more]
NIA_VOLCA6.447e-1640.86Nitrate reductase [NADH] OS=Volvox carteri GN=NITA... [more]
CYB5_NEUCR8.420e-1644.71Probable cytochrome b5 OS=Neurospora crassa GN=B23... [more]
CYB5_CHICK8.420e-1639.56Cytochrome b5 OS=Gallus gallus GN=CYB5A PE=1 SV=4[more]
CYB5_HORSE1.100e-1546.67Cytochrome b5 OS=Equus caballus GN=CYB5A PE=1 SV=3[more]
CYB5_BOVIN1.436e-1540.00Cytochrome b5 OS=Bos taurus GN=CYB5A PE=1 SV=3[more]
CYB5_RABIT1.876e-1543.18Cytochrome b5 OS=Oryctolagus cuniculus GN=CYB5A PE... [more]
CYB5_PIG1.876e-1546.67Cytochrome b5 OS=Sus scrofa GN=CYB5A PE=1 SV=3[more]
CYB5_MORAP5.458e-1545.68Cytochrome b5 OS=Mortierella alpina PE=1 SV=1[more]
CYB5_RAT9.309e-1545.33Cytochrome b5 OS=Rattus norvegicus GN=Cyb5a PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659175 ID=EY659175; Name=EY659175; organism=Citrus sinensis; type=EST; length=957bp
TTTAAAAGACCGACCCACGCGTCCGCAAATGGCCTTATATCCAAANATTC
ACCAGTTCGACCAGGTCGCCACGCACAACAAAACTAAGGATTGCTGGCTT
ATTATTTCTGGCAAGGTGTATGATGTGTCCTCGTTCATGGATGATCACCC
TGGAGGAGATGAGGTTTTGATTTCTGCAGCTGGGAAAGATGCAACAAATG
ACTTTGAATATGTGGGTCACAGTGACTCCGCTAGGGAGATGATGGACAAG
TACTATATTGGTGACATTGATCCCTCAACTGTTCCTCGGAAACGTGCATA
TATTCCACTGGAGCAACCTGCTTACAATCAAGACAAGACCCCTGAGTTCA
TTATTAAGATTCTACAGATTCTTGTGCCGCTCTTGATATTGGGTTTAGCC
TTTGTGGTCAGACTCTATACCAAGAAAGAGTGGGTGGCCTTCTCAATAAA
ATGAGTCATCTCCGGAATGGGAAGCTGGTGATTTGCATGAGCTTAGTTCT
AGGACATTGATCTCTTATTTACTTTCCTATGGGGGTTGGTTCTGCTGAAA
TTGAATAGTGGTTCGGTGTCCACCAGAGACCATATTGGCTGTCTTCTCTT
GAGTGGCTTGCTCCTAATGTTTTTCATTGGTGGCCACGGGATAATGTTGA
TTTTTATTGGATCCCTGGATGGAATGCAAGGCATGTTTTTCCTTCTGATC
GAACGCTTTTTCCTGACGAGGGTATTCGTCTTTTATTGGCGGGCGGTATT
ATTCTCCTCCGGTGCTTCATGTTTAAAAAAAAAAAAAAAAGGGCCGGGCG
CCTTAGAGATCCAGCCTTCTTGCCCGCGCGTTCCACGCCTACCTCTTGTT
TTGGTTCCTAAATTAATTATTGGCCTGGCTTTACCCCGGGGACTGGGAAA
ACCTGGCGTCCCCCCTTATCGGCCTGGCCAATTCCCTTTCACCGTGGAGG
AAAAAAA
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