EY659175

Overview
NameEY659175
Unique NameEY659175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: CYB5_MOUSE (Cytochrome b5 OS=Mus musculus GN=Cyb5a PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 9.309e-15
Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 2
Query:   50 HQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDP 274
            +  +++  H  +K  W+I+  KVYD++ F+++HPGG+EVL   AG DAT +FE VGHS  ARE+   Y IG++ P
Sbjct:   12 YTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGELHP 86          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA2_ARATH (Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana GN=NIA2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.293e-13
Identity = 33/89 (37.08%), Postives = 53/89 (59.55%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M     ++   +V  HN    CW+I+ G +YD + F+ DHPGG + ++  AG D T +FE + HSD A++M++ Y IG++
Sbjct:  529 LKKSVSTPFMNTTAKMYSMSEVKKHNSADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFEAI-HSDKAKKMLEDYRIGEL 616          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA_LOTJA (Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.713e-13
Identity = 32/89 (35.96%), Postives = 53/89 (59.55%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M  +  ++   +V  HN     W+I+ G VYD + F+ DHPGG + ++  AG D T +FE + HSD A++M++ Y +G++
Sbjct:  508 LKKSVSSPFMNTFTKMYSLSEVKKHNSPDSAWIIVHGHVYDCTRFLKDHPGGADSILINAGTDCTEEFEAI-HSDKAKKMLEDYRVGEL 595          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.138e-12
Identity = 33/89 (37.08%), Postives = 53/89 (59.55%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M      +   +V  HN     W+I++G VYD + F+ DHPGG++ ++  AG D T +FE + HSD A++M++ Y IG++
Sbjct:  502 LKKSVSSPFMNTATKSYSLSEVRRHNNRDSAWIIVNGHVYDCTRFLKDHPGGEDSILLNAGTDCTEEFEAI-HSDKAKKMLEDYRIGEL 589          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA2_BRANA (Nitrate reductase [NADH], clone PBNBR1412 OS=Brassica napus GN=NIA2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.941e-12
Identity = 31/89 (34.83%), Postives = 53/89 (59.55%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M     ++   +V  HN  +  W+I+ G +YD + F+ DHPGG + ++  AG D T +FE + HSD A+++++ Y IG++
Sbjct:  526 LKKSVSSPFMNTSAKMYSMSEVRKHNSVESAWIIVHGHIYDCTRFLKDHPGGSDSILINAGTDCTEEFEAI-HSDKAKKLLEDYRIGEL 613          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA1_BRANA (Nitrate reductase [NADH], clone PBNBR1405 OS=Brassica napus GN=NIA1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.941e-12
Identity = 31/89 (34.83%), Postives = 53/89 (59.55%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M     ++   +V  HN  +  W+I+ G +YD + F+ DHPGG + ++  AG D T +FE + HSD A+++++ Y IG++
Sbjct:  526 LKKSVSTPFMNTASKMYSMSEVRKHNSAESAWIIVHGHIYDCTRFLKDHPGGSDSILINAGTDCTEEFEAI-HSDKAKKLLEDYRIGEL 613          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.535e-12
Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M      +   +V  HN     W+I+ G VYD + F+ DHPGG + ++  AG D T +FE + HSD A++M++ Y IG++
Sbjct:  504 LKKSVSSPFMNTTSKTYTMSEVRRHNNADSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFEAI-HSDKAKQMLEDYRIGEL 591          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA_CUCMA (Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.324e-12
Identity = 32/89 (35.96%), Postives = 52/89 (58.43%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M      +   +V  HN  +  W+I+ G VYD + F+ DHPGG + ++  AG D T +F+ + HSD A++M++ Y IG++
Sbjct:  530 LKKSVSTPFMNTASNTYTLSEVKKHNSPQSAWIIVHGHVYDCTRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKKMLEDYRIGEL 617          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA_LEPMC (Nitrate reductase [NADPH] OS=Leptosphaeria maculans GN=NIAD PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.648e-12
Identity = 34/101 (33.66%), Postives = 60/101 (59.41%), Query Frame = 2
Query:   47 IHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTPEF 349
            I + D++  H   +  W +++ +VYD +SF++ HPGG + +ISAAG DA+++F  + HS++A+ MM  Y+IG + P+   +     P  + A +    P F
Sbjct:  538 IVELDELKWHESAEYPWFVVNDEVYDGTSFLEGHPGGAQSIISAAGLDASDEFMAI-HSETAKAMMPAYHIGTLSPTASKQLSLEEPTSKQASSSSLRPTF 637          
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA1_SOYBN (Inducible nitrate reductase [NADH] 1 OS=Glycine max GN=INR1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.648e-12
Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 2
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M      +   +V  HN     W+I+ G VYD + F+ DHPGG + ++  AG D T +FE + HSD A++M++ Y IG++
Sbjct:  500 LKKSVSSPFMNTTSKTYTMSEVRRHNNADSAWIIVHGHVYDWTRFLKDHPGGTDRILINAGTDCTEEFEAI-HSDKAKQMLEDYRIGEL 587          
The following BLAST results are available for this feature:
BLAST of EY659175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CYB5_MOUSE9.309e-1545.33Cytochrome b5 OS=Mus musculus GN=Cyb5a PE=1 SV=2[more]
NIA2_ARATH2.293e-1337.08Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana... [more]
NIA_LOTJA8.713e-1335.96Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA... [more]
NIA1_PHAVU1.138e-1237.08Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
NIA2_BRANA1.941e-1234.83Nitrate reductase [NADH], clone PBNBR1412 OS=Brass... [more]
NIA1_BRANA1.941e-1234.83Nitrate reductase [NADH], clone PBNBR1405 OS=Brass... [more]
NIA2_SOYBN2.535e-1237.08Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]
NIA_CUCMA4.324e-1235.96Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 ... [more]
NIA_LEPMC5.648e-1233.66Nitrate reductase [NADPH] OS=Leptosphaeria maculan... [more]
NIA1_SOYBN5.648e-1237.08Inducible nitrate reductase [NADH] 1 OS=Glycine ma... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659175 ID=EY659175; Name=EY659175; organism=Citrus sinensis; type=EST; length=957bp
TTTAAAAGACCGACCCACGCGTCCGCAAATGGCCTTATATCCAAANATTC
ACCAGTTCGACCAGGTCGCCACGCACAACAAAACTAAGGATTGCTGGCTT
ATTATTTCTGGCAAGGTGTATGATGTGTCCTCGTTCATGGATGATCACCC
TGGAGGAGATGAGGTTTTGATTTCTGCAGCTGGGAAAGATGCAACAAATG
ACTTTGAATATGTGGGTCACAGTGACTCCGCTAGGGAGATGATGGACAAG
TACTATATTGGTGACATTGATCCCTCAACTGTTCCTCGGAAACGTGCATA
TATTCCACTGGAGCAACCTGCTTACAATCAAGACAAGACCCCTGAGTTCA
TTATTAAGATTCTACAGATTCTTGTGCCGCTCTTGATATTGGGTTTAGCC
TTTGTGGTCAGACTCTATACCAAGAAAGAGTGGGTGGCCTTCTCAATAAA
ATGAGTCATCTCCGGAATGGGAAGCTGGTGATTTGCATGAGCTTAGTTCT
AGGACATTGATCTCTTATTTACTTTCCTATGGGGGTTGGTTCTGCTGAAA
TTGAATAGTGGTTCGGTGTCCACCAGAGACCATATTGGCTGTCTTCTCTT
GAGTGGCTTGCTCCTAATGTTTTTCATTGGTGGCCACGGGATAATGTTGA
TTTTTATTGGATCCCTGGATGGAATGCAAGGCATGTTTTTCCTTCTGATC
GAACGCTTTTTCCTGACGAGGGTATTCGTCTTTTATTGGCGGGCGGTATT
ATTCTCCTCCGGTGCTTCATGTTTAAAAAAAAAAAAAAAAGGGCCGGGCG
CCTTAGAGATCCAGCCTTCTTGCCCGCGCGTTCCACGCCTACCTCTTGTT
TTGGTTCCTAAATTAATTATTGGCCTGGCTTTACCCCGGGGACTGGGAAA
ACCTGGCGTCCCCCCTTATCGGCCTGGCCAATTCCCTTTCACCGTGGAGG
AAAAAAA
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