EY659175

Overview
NameEY659175
Unique NameEY659175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.781e-11
Identity = 28/89 (31.46%), Postives = 53/89 (59.55%), Query Frame = 2 
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M     ++   +V  H+     W+I+ G +YD + F+ DHPGG + ++  AG D T +F+ + HSD A+++++++ IG++
Sbjct:  518 LKKSISTPFMNTASKMYSMSEVRKHSSADSAWIIVHGHIYDATRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKKLLEEFRIGEL 605
[Close]
BLAST of EY659175 vs. ExPASy Swiss-Prot
Match: NIA_SPIOL (Nitrate reductase [NADH] OS=Spinacia oleracea GN=NIA PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11
Identity = 28/89 (31.46%), Postives = 51/89 (57.30%), Query Frame = 2 
Query:    2 LKDRPTRPQMALYPXIHQFDQVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISAAGKDATNDFEYVGHSDSAREMMDKYYIGDI 268
            LK   + P M     ++   +V  HN     W+++ G VY+ + F+ DHPGG + ++  AG D T +F+ + HSD A+ +++ + IG++
Sbjct:  538 LKRTASTPFMNTTSKMYSMSEVKKHNTADSAWIVVHGNVYNATRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKRLLEDFRIGEL 625
The following BLAST results are available for this feature:
BLAST of EY659175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
NIA1_TOBAC4.781e-1131.46Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
NIA_SPIOL8.155e-1131.46Nitrate reductase [NADH] OS=Spinacia oleracea GN=N... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659175 ID=EY659175; Name=EY659175; organism=Citrus sinensis; type=EST; length=957bp
TTTAAAAGACCGACCCACGCGTCCGCAAATGGCCTTATATCCAAANATTC
ACCAGTTCGACCAGGTCGCCACGCACAACAAAACTAAGGATTGCTGGCTT
ATTATTTCTGGCAAGGTGTATGATGTGTCCTCGTTCATGGATGATCACCC
TGGAGGAGATGAGGTTTTGATTTCTGCAGCTGGGAAAGATGCAACAAATG
ACTTTGAATATGTGGGTCACAGTGACTCCGCTAGGGAGATGATGGACAAG
TACTATATTGGTGACATTGATCCCTCAACTGTTCCTCGGAAACGTGCATA
TATTCCACTGGAGCAACCTGCTTACAATCAAGACAAGACCCCTGAGTTCA
TTATTAAGATTCTACAGATTCTTGTGCCGCTCTTGATATTGGGTTTAGCC
TTTGTGGTCAGACTCTATACCAAGAAAGAGTGGGTGGCCTTCTCAATAAA
ATGAGTCATCTCCGGAATGGGAAGCTGGTGATTTGCATGAGCTTAGTTCT
AGGACATTGATCTCTTATTTACTTTCCTATGGGGGTTGGTTCTGCTGAAA
TTGAATAGTGGTTCGGTGTCCACCAGAGACCATATTGGCTGTCTTCTCTT
GAGTGGCTTGCTCCTAATGTTTTTCATTGGTGGCCACGGGATAATGTTGA
TTTTTATTGGATCCCTGGATGGAATGCAAGGCATGTTTTTCCTTCTGATC
GAACGCTTTTTCCTGACGAGGGTATTCGTCTTTTATTGGCGGGCGGTATT
ATTCTCCTCCGGTGCTTCATGTTTAAAAAAAAAAAAAAAAGGGCCGGGCG
CCTTAGAGATCCAGCCTTCTTGCCCGCGCGTTCCACGCCTACCTCTTGTT
TTGGTTCCTAAATTAATTATTGGCCTGGCTTTACCCCGGGGACTGGGAAA
ACCTGGCGTCCCCCCTTATCGGCCTGGCCAATTCCCTTTCACCGTGGAGG
AAAAAAA
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