EY659174

Overview
NameEY659174
Unique NameEY659174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7629 contig Csv1_Contig7629:1..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY659174 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 6.332e-53
Identity = 108/238 (45.38%), Postives = 154/238 (64.71%), Query Frame = 2 
Query:  101 SKSKILFIGGTGYIGKFIVEASAKAGHPTFVLVRESTLSDPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVASNFFAAYFLPNLSQPGATAPPRDKVVILGDGNPKAVYNKEDDIGTYTIKAVDDPRTLNKILYIKPPGNIYSFNDLVSLWERKIGKTL 808
            +K++ L +GGTG+IG+FI +AS   G+PTF+LVR   +S PSK+ ++  F+  G  ++ G + + E + K +K+  +DVVIS VG   L DQ+ ++ AIK    IKRF PSEFG+DVDR   VEP  + +  K  +RRAVE  GIP+T +  N  A++   +   P    PP D+  I GDGN KA +   +DIG +T+K +DD RTLNK ++ +P  N YS N+L SLWE+KIG+TL
Sbjct:   11 TKNRTLVVGGTGFIGQFITKASLGFGYPTFLLVRPGPVS-PSKAVIIKTFQDKGAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRPSSNCYSINELASLWEKKIGRTL 247
The following BLAST results are available for this feature:
BLAST of EY659174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN6.332e-5345.38Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-B12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659174 ID=EY659174; Name=EY659174; organism=Citrus sinensis; type=EST; length=932bp
TGCCGGNATTCCCGGCCTCGACCCACGCGTCCGCAAAACAAAACANAAAA
AAAAAGGAAAGAATCCCCGAAATTGAACTGAATAATTCTCGGTAATGGCG
TCGAAAAGCAAGATTCTATTCATCGGCGGTACAGGGTACATCGGCAAATT
CATCGTCGAAGCGAGCGCGAAAGCCGGCCACCCGACGTTCGTGCTCGTGA
GAGAATCCACACTCTCCGATCCTTCCAAATCTCAGCTCCTCGATCACTTC
AAAAAACTCGGCGTCAATCTCGTCATCGGAGATGTGTTGAATCACGAGAG
CTTGGTGAAGGCGATAAAACAAGTGGACGTGGTGATATCAACGGTCGGTC
ACACTTTATTAGGTGATCAGGTCAAGATTATTGCGGCCATTAAAGAAGCT
GGTAACATTAAGAGATTCTTCCCTTCAGAATTTGGGAATGATGTTGATCG
AGTCCATGCCGTTGAGCCAGCAAAATCAGCATTTGCCACAAAGGCAAAAA
TCCGCCGAGCCGTTGAGGCTGAAGGGATTCCGTATACTTATGTAGCGTCG
AATTTCTTTGCTGCTTACTTCCTTCCCAATTTGTCGCAGCCCGGGGCCAC
TGCCCCACCTAGGGATAAAGTTGTCATCTTAGGCGATGGAAATCCAAAAG
CTGTTTATAACAAGGAAGATGATATTGGAACCTATACTATCAAAGCGGTT
GATGATCCCAGAACCTTGAACAAAATCCTTTACATTAAACCCCCTGGTAA
TATTTACTCATTCAATGATCTTGTGTCCTTGTGGGAGAGAAAGATTGGCA
AAACCCTCCAAGGGTGTACGTTCCGGAGGAGCAGTNCTCAAGATATTCAA
GAGCTGACCTCCAGTAATGTGATATATCAATTAGCACTCGGCTTCCGTGA
AGGAGATCAACCCACTTCAGATTGACATCGGT
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