EY659144

Overview
NameEY659144
Unique NameEY659144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_OPHHA (40S ribosomal protein S3a OS=Ophiophagus hannah GN=RPS3A PE=2 SV=3)

HSP 1 Score: 268.085 bits (684), Expect = 4.936e-71
Identity = 129/207 (62.32%), Postives = 164/207 (79.23%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGD 747
            DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E  A+RK +L  EDVQGKN L NF GM  T DK+ S+V+KW T+IEA++DVKTTD + LRLFC+GFTK+  NQ+++T YAQ  Q+RQIR+KM EIM  +  + DLK +V K I + IG++IEKA  SIYPL +V++RKVK+LK P F+L KLM +HG+
Sbjct:   29 DWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMVEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGE 234          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3AB_XENLA (40S ribosomal protein S3a-B OS=Xenopus laevis GN=rps3a-B PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.936e-71
Identity = 131/207 (63.29%), Postives = 164/207 (79.23%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGD 747
            DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E  A+RK +L  EDVQGKN LTNF GM  T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+  NQ+++T YAQ  Q+RQIR+KM EIM  +  + DLK +V K I + IG++IEKA  SIYPL +V+ RKVK+LK P F+L KLM +HG+
Sbjct:   29 DWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMSREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYARKVKMLKKPKFELGKLMELHGE 234          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_CANDC (40S ribosomal protein S1 OS=Candida dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 6.447e-71
Identity = 128/209 (61.24%), Postives = 166/209 (79.43%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS 753
            DW+DIKAP+ F  RNVGKTL+ R+ G K A++GLK RVFEV L DL   E+H+YRKI+LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I FTKR PNQ+K+T YAQ+S++R++R+KM EIM  + ++C L  L  K I EVIGREIEK+T +I+PLQNV IRKVK+LK P FDL  L+ +HG+ S
Sbjct:   28 DWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIAFTKRQPNQIKKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGS 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_CANAW (40S ribosomal protein S1 OS=Candida albicans (strain WO-1) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 6.447e-71
Identity = 128/209 (61.24%), Postives = 166/209 (79.43%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS 753
            DW+DIKAP+ F  RNVGKTL+ R+ G K A++GLK RVFEV L DL   E+H+YRKI+LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I FTKR PNQ+K+T YAQ+S++R++R+KM EIM  + ++C L  L  K I EVIGREIEK+T +I+PLQNV IRKVK+LK P FDL  L+ +HG+ S
Sbjct:   28 DWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIAFTKRQPNQIKKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGS 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_CANAL (40S ribosomal protein S1 OS=Candida albicans GN=RPS1 PE=3 SV=3)

HSP 1 Score: 267.7 bits (683), Expect = 6.447e-71
Identity = 128/209 (61.24%), Postives = 166/209 (79.43%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS 753
            DW+DIKAP+ F  RNVGKTL+ R+ G K A++GLK RVFEV L DL   E+H+YRKI+LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I FTKR PNQ+K+T YAQ+S++R++R+KM EIM  + ++C L  L  K I EVIGREIEK+T +I+PLQNV IRKVK+LK P FDL  L+ +HG+ S
Sbjct:   28 DWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIAFTKRQPNQIKKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGS 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_CALJA (40S ribosomal protein S3a OS=Callithrix jacchus GN=RPS3A PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 6.447e-71
Identity = 131/209 (62.68%), Postives = 164/209 (78.47%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS 753
            DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL D  N+E  A+RK +L  EDVQGKN LTNF GM  T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+  NQ+++T YAQ  Q+ QIR+KM EIM  +  + DLK +V K I + IG++IEKA  SIYPL +VF+RKVK+LK P F+L KLM +HG+ S
Sbjct:   29 DWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADFQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKHNNQIRKTSYAQHQQVCQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKIPKFELGKLMELHGEGS 236          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_PARBP (40S ribosomal protein S1 OS=Paracoccidioides brasiliensis (strain Pb03) GN=RPS1 PE=3 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 3.200e-70
Identity = 140/227 (61.67%), Postives = 172/227 (75.77%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS-EXCXVKVDRPADEPYLK 804
            D Y +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I FTKR PNQ+K+T YAQ+SQIR IR+KM EI+  +A +  L  L  K I EVIGREIEKAT  IYPLQNV IRKVK+LK+P FDL  L+ +HG+ S +    KV+R   E  L+
Sbjct:   28 DEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYAQSSQIRAIRKKMVEIIQREAGTRSLAQLT-KLIPEVIGREIEKATHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKETVLE 253          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_PARBD (40S ribosomal protein S1 OS=Paracoccidioides brasiliensis (strain Pb18) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 3.200e-70
Identity = 140/227 (61.67%), Postives = 172/227 (75.77%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS-EXCXVKVDRPADEPYLK 804
            D Y +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I FTKR PNQ+K+T YAQ+SQIR IR+KM EI+  +A +  L  L  K I EVIGREIEKAT  IYPLQNV IRKVK+LK+P FDL  L+ +HG+ S +    KV+R   E  L+
Sbjct:   28 DEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYAQSSQIRAIRKKMVEIIQREAGTRSLAQLT-KLIPEVIGREIEKATHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKETVLE 253          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_PARBA (40S ribosomal protein S1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 3.200e-70
Identity = 140/227 (61.67%), Postives = 172/227 (75.77%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS-EXCXVKVDRPADEPYLK 804
            D Y +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I FTKR PNQ+K+T YAQ+SQIR IR+KM EI+  +A +  L  L  K I EVIGREIEKAT  IYPLQNV IRKVK+LK+P FDL  L+ +HG+ S +    KV+R   E  L+
Sbjct:   28 DEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYAQSSQIRAIRKKMVEIIQREAGTRSLAQLT-KLIPEVIGREIEKATHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKETVLE 253          
BLAST of EY659144 vs. ExPASy Swiss-Prot
Match: RS3A_CANTT (40S ribosomal protein S1 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 7.128e-70
Identity = 127/209 (60.77%), Postives = 164/209 (78.47%), Query Frame = 1
Query:  127 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPXFDLEKLMXVHGDYS 753
            DW+DIKAP+ F  RNVGKTL+ R+ G K A++GLK RVFEV L DL   E+H+YRKI+LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR  NQ+K+T YAQ+S++R++R+KM EIM  + ++C L  L  K I EVIGREIEK+T +I+PLQNV IRKVK+LK P FDL  L+ +HG+ S
Sbjct:   28 DWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIAFTKRQANQIKKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGS 236          
The following BLAST results are available for this feature:
BLAST of EY659144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
RS3A_OPHHA4.936e-7162.3240S ribosomal protein S3a OS=Ophiophagus hannah GN... [more]
RS3AB_XENLA4.936e-7163.2940S ribosomal protein S3a-B OS=Xenopus laevis GN=r... [more]
RS3A_CANDC6.447e-7161.2440S ribosomal protein S1 OS=Candida dubliniensis (... [more]
RS3A_CANAW6.447e-7161.2440S ribosomal protein S1 OS=Candida albicans (stra... [more]
RS3A_CANAL6.447e-7161.2440S ribosomal protein S1 OS=Candida albicans GN=RP... [more]
RS3A_CALJA6.447e-7162.6840S ribosomal protein S3a OS=Callithrix jacchus GN... [more]
RS3A_PARBP3.200e-7061.6740S ribosomal protein S1 OS=Paracoccidioides brasi... [more]
RS3A_PARBD3.200e-7061.6740S ribosomal protein S1 OS=Paracoccidioides brasi... [more]
RS3A_PARBA3.200e-7061.6740S ribosomal protein S1 OS=Paracoccidioides brasi... [more]
RS3A_CANTT7.128e-7060.7740S ribosomal protein S1 OS=Candida tropicalis (st... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659144 ID=EY659144; Name=EY659144; organism=Citrus sinensis; type=EST; length=902bp
CCACGCGTCCGGCGGAGCCGTCTCTTGAGCAGCAGCTGCACAAACATGGC
CGTCGGGAAGAACAAGAGGATTTCAAAGGGGAAGAAAGGAGGCAAGAAGA
AGGCTGCTGATCCGTTTGCCAAGAAGGACTGGTATGATATCAAGGCTCCA
TCTTGTTTCCGCGTCAGAAATGTTGGCAAGACTCTTGTTACCCGGACTCA
GGGTACCAAGATTGCATCAGAAGGACTCAAACACAGAGTGTTTGAGGTAT
CACTAGGTGATCTTCTCAACGAAGAAGAGCACGCTTACAGGAAGATCAGA
CTGAGAGCTGAAGATGTCCAAGGGAAGAATGTGTTGACTAACTTCTGGGG
CATGAGTTTCACTACAGACAAGCTGAGGTCTTTGGTTAGGAAGTGGCATA
CCTTGATTGAAGCTTATGTGGATGTCAAGACCACTGATAACTTCACATTG
AGATTGTTCTGCATTGGATTCACCAAGAGACTTCCAAACCAGGTTAAGAG
GACTTGCTATGCACAGACCAGCCAGATTAGACAGATTCGCCGCAAGATGA
GGGAGATCATGGTTGCTCAGGCAGCATCTTGTGATCTTAAGAGCTTGGTC
GAAAAGTTCATTGCTGAAGTGATTGGAAGAGAGATTGAGAAGGCAACCTC
AAGCATATATCCCTTACAAAATGTGTTCATTCGCAAAGTGAAGATCCTGA
AAGCTCCCNAGTTTGATCTTGAAAAATTGATGGANGTTCACGGTGATTAC
TCGGAAANATGTNGTGTGAAGGTGGATAGGCCAGCTGATGAGCCATACCT
GAAGCACCACTGAGTGATTGGAGCTTGACGTGATGAAGAATTTTCTAGNT
TGTTTTCCACACATCTGATCTGGCAGTTTGTTGTTATGACCATCAACATG
AA
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