EY659142

Overview
NameEY659142
Unique NameEY659142
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659142_ssr612 microsatellite EY659142_ssr612:612..623. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7713 contig Csv1_Contig7713:450..1376. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E13F_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.333e-60
Identity = 116/189 (61.38%), Postives = 147/189 (77.78%), Query Frame = 3
Query:   18 AINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNR-QISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFA 581
            AI  AGLGN IKVST+++   +G S+PPS+GSF+ D R   DP++ FL + R+PLL+N+YPYF+ +GN  QISL Y+LF +   VV DGS  YR+LFDA+LD+VYAALE++GG S+GIV+SESGWP+AG  GA    DNA TY  NLIQH K GSP++PG PIETYIFAMFDEN K  PE+E+H+GLF+
Sbjct:  152 AIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGA--TYDNAATYLRNLIQHAKEGSPRKPG-PIETYIFAMFDENNK-NPELEKHFGLFS 336          

HSP 2 Score: 22.3274 bits (46), Expect = 2.333e-60
Identity = 7/15 (46.67%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  569 GTFCSTRQPRYQINF 613
            G F   +QP+Y +NF
Sbjct:  333 GLFSPNKQPKYNLNF 347          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E13E_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 6.741e-60
Identity = 115/189 (60.85%), Postives = 147/189 (77.78%), Query Frame = 3
Query:   18 AINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNR-QISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFA 581
            AI  AGLGN IKVST+++   +G S+PPS+GSF+ D R  +D ++ FL + R+PLL+N+YPYF+ +GN  QISL Y+LF +   VV DGS  YR+LFDA+LD+VYAALE++GG S+GIV+SESGWP+AG  GA    DNA TY  NLIQH K GSP++PG PIETYIFAMFDEN K  PE+E+H+GLF+
Sbjct:  152 AIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFVDAIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGA--TYDNAATYLRNLIQHAKEGSPRKPG-PIETYIFAMFDENNK-NPELEKHFGLFS 336          

HSP 2 Score: 23.0978 bits (48), Expect = 6.741e-60
Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  569 GTFCSTRQPRYQINF 613
            G F   +QP+Y INF
Sbjct:  333 GLFSPNKQPKYNINF 347          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E13B_HEVBR (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis GN=HGN1 PE=1 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 1.104e-57
Identity = 116/189 (61.38%), Postives = 141/189 (74.60%), Query Frame = 3
Query:   15 NAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLF 578
            +AI +AGL +QIKVSTAI+   +G S+PPS G+F+ D R  LDP+I FL+  RSPLL N+YPYF  A N R ISL YALF S   VV DG   Y++LFDA LDA+Y+ALE+  GGSL +V+SESGWP+AG   A    DN RTY +NLIQHVK G+PKRP R IETY+FAMFDEN K  PE+E+H+GLF
Sbjct:  154 DAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYLDPIIGFLSSIRSPLLANIYPYFTYAYNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATLDALYSALERASGGSLEVVVSESGWPSAGAFAA--TFDNGRTYLSNLIQHVKGGTPKRPNRAIETYLFAMFDEN-KKQPEVEKHFGLF 339          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E13B_VITVI (Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera GN=GSVIVT00022223001 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.441e-57
Identity = 116/190 (61.05%), Postives = 140/190 (73.68%), Query Frame = 3
Query:   12 QNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQ-ISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLF 578
            Q+AI +AGL  QIKVSTA  +  LG S+PPS GSF  D    ++P+I FL EN SPLL N+YPYF+  G+ Q I LDYALF +   VV DGS  Y++LFDA+LDA+YAALEK GG +L IV+SESGWP+ GG  A   VDNARTY  NLI HVK G+P++ G  IETY+FAMFDEN KTG E E+H+GLF
Sbjct:   87 QSAITSAGLQGQIKVSTATYSSVLGTSYPPSAGSFSSDASSFINPIISFLAENGSPLLANIYPYFSYTGDTQNIRLDYALFTASGVVVQDGSYQYQNLFDALLDALYAALEKAGGSNLKIVVSESGWPSEGGTAA--TVDNARTYYKNLINHVKGGTPRKSG-AIETYLFAMFDENQKTGLETEKHFGLF 273          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E13A_ARATH (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Arabidopsis thaliana GN=BG2 PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 3.012e-57
Identity = 114/190 (60.00%), Postives = 145/190 (76.32%), Query Frame = 3
Query:   12 QNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNR-QISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLF 578
            +NA++ AGL  ++KVSTAI T    ++ PPS+G F+ +Y+  L+P+I FL   +SPLL+NLYPYF+  G+   I LDYALF +Q TV +D   SY++LFDA LD+VYAALEK+GGGSL IV+SE+GWPT G  G  T+V+NA+TY NNLIQHVK GSP+RPG+ IETYIFAMFDEN K  P  E+ WGLF
Sbjct:  142 ENAVSGAGL--EVKVSTAIATDTTTDTSPPSQGRFRDEYKSFLEPVIGFLASKQSPLLVNLYPYFSYMGDTANIHLDYALFTAQSTVDNDPGYSYQNLFDANLDSVYAALEKSGGGSLEIVVSETGWPTEGAVG--TSVENAKTYVNNLIQHVKNGSPRRPGKAIETYIFAMFDEN-KKEPTYEKFWGLF 326          

HSP 2 Score: 22.7126 bits (47), Expect = 3.012e-57
Identity = 8/16 (50.00%), Postives = 11/16 (68.75%), Query Frame = 2
Query:  569 GTFCSTRQPRYQINFN 616
            G F   RQ +Y++NFN
Sbjct:  324 GLFHPDRQSKYEVNFN 339          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E13B_PHAVU (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.396e-52
Identity = 106/188 (56.38%), Postives = 139/188 (73.94%), Query Frame = 3
Query:   18 AINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLF 578
            A+ A GL +QIKVSTAI+   +G S+PPS+GSF+ D R  LDP+I +L    +PL +N+YPYF+ +GN R ISL YALF S   VV DG   Y++LFDA+LD+V+AA++ T  G + +V+SESGWP+ GG GA    DNAR Y +NL++   RGSP+RP +P ETYIFAMFDEN K+ PEIE+H+GLF
Sbjct:  119 AVRAQGLHDQIKVSTAIDMTLIGNSYPPSQGSFRGDVRSYLDPIIGYLLYASAPLHVNVYPYFSYSGNPRDISLPYALFTSPNVVVRDGQYGYQNLFDAMLDSVHAAIDNTRIGYVEVVVSESGWPSDGGFGA--TYDNARVYLDNLVRRAGRGSPRRPSKPTETYIFAMFDENQKS-PEIEKHFGLF 303          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E13B_PEA (Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.485e-50
Identity = 104/188 (55.32%), Postives = 139/188 (73.94%), Query Frame = 3
Query:   18 AINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLF 578
            AI A GL +QIKV+TAI+   +G SFPPS+GSF+ D R  LDP I +L    +PLL+N+YPYF+  GN R ISL YALF S   +V DG   Y++LFDA+LD+V+AAL+ TG G + +V+SESGWP+ G  G+ T+ DNAR Y +NLI+HV +G+P+RP    E Y+FAMFDEN K+ PE+E+H+G+F
Sbjct:  151 AIRAQGLHDQIKVTTAIDMTLIGNSFPPSKGSFRSDVRSYLDPFIGYLVYAGAPLLVNVYPYFSHIGNPRDISLPYALFTSPGVMVQDGPNGYQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDG--GSATSYDNARIYLDNLIRHVGKGTPRRPW-ATEAYLFAMFDENQKS-PELEKHFGVF 334          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E13B_MAIZE (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Zea mays PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 9.364e-49
Identity = 105/189 (55.56%), Postives = 136/189 (71.96%), Query Frame = 3
Query:   18 AINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEK-TGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLF 578
            A+  AGLG  IKVSTA+++    + FPPS+G+F Q Y   + P  ++L    +PLL N+YPYF+  GN  QI L YALF S  TVV DGS +Y++LFDA++D   +ALE+  G G++ +V+SESGWP+AGGD A     NA+TYN NLI HV +G+PKRPG PIETYIFAMF+E+ KTG E ERH+GLF
Sbjct:  141 ALANAGLGGSIKVSTAVQSDVT-QGFPPSQGTFSQGY---MAPSRQYLQSTGAPLLSNVYPYFSYVGNPAQIDLKYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALEENAGAGNVPVVVSESGWPSAGGDAA--TAANAQTYNQNLINHVGQGTPKRPG-PIETYIFAMFNEDQKTGAESERHFGLF 322          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E13K_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.927e-48
Identity = 95/192 (49.48%), Postives = 133/192 (69.27%), Query Frame = 3
Query:   15 NAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFA-IAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVK--RGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFA 581
            NA+ AAGL + IKVST   +G L  ++PP R  F+++++  ++P+I+FL  N  PLL N+YPYF  ++    +SL YALF  Q T     S  Y++LFDAILD++Y A+EK GG ++ I++SESGWP+ G   A   ++NA+TY  NLI HVK   G+PK+PG+ IETY+FAMFDEN K G   E+H+GLF+
Sbjct:  126 NALAAAGLQDMIKVSTVTYSGVLANTYPPERSIFREEFKSFINPIIQFLARNNLPLLANVYPYFVHVSNTADVSLSYALFTQQGT----NSAGYQNLFDAILDSMYFAVEKAGGPNVEIIVSESGWPSEGSSAA--TIENAQTYYRNLINHVKSGAGTPKKPGKTIETYLFAMFDENDKIGEITEKHFGLFS 311          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E13D_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41B PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.550e-46
Identity = 94/191 (49.21%), Postives = 130/191 (68.06%), Query Frame = 3
Query:   15 NAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFA-IAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVK--RGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLF 578
            NA+ AAGL ++IKVSTA  +G L  ++PP    F+++ +  ++P+I FL  N  PLL N+YPYF  I     + L YALF  Q+T     S  Y++LFDA+LD++Y A+EK GG ++ I++SESGWP+ G   A   ++NA+TY  NL+ HVK   G+PK+PGR IETY+FAMFDEN K G   E+H+GLF
Sbjct:  150 NALAAAGLQDKIKVSTATYSGLLANTYPPKDSIFREELKSFINPIIEFLARNNLPLLANIYPYFGHIYNTVDVPLSYALFNQQET----NSTGYQNLFDALLDSIYFAVEKAGGPNVEIIVSESGWPSEGNSAA--TIENAQTYYRNLVNHVKGGAGTPKKPGRIIETYLFAMFDENEKQGEITEKHFGLF 334          
The following BLAST results are available for this feature:
BLAST of EY659142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
E13F_TOBAC2.333e-6061.38Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13E_TOBAC6.741e-6060.85Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_HEVBR1.104e-5761.38Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_VITVI1.441e-5761.05Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera... [more]
E13A_ARATH3.012e-5760.00Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
E13B_PHAVU1.396e-5256.38Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
E13B_PEA6.485e-5055.32Glucan endo-1,3-beta-glucosidase OS=Pisum sativum ... [more]
E13B_MAIZE9.364e-4955.56Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
E13K_TOBAC7.927e-4849.48Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13D_TOBAC2.550e-4649.21Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-H02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659142 ID=EY659142; Name=EY659142; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCAAAACGCCATCAACGCAGCCGGCCTTGGAAACCAAATC
AAGGTTTCCACTGCCATCGAAACTGGAGCTCTTGGCGAATCTTTCCCTCC
GTCAAGAGGCTCATTTAAACAAGATTACAGACCCATTCTTGATCCCCTCA
TTCGTTTCCTCAACGAAAACAGATCCCCCTTGCTTCTCAACCTGTACCCT
TACTTCGCAATTGCTGGTAACCGCCAAATATCTCTGGATTATGCACTATT
TAGGTCACAACAGACGGTCGTTTCCGACGGATCGTTAAGTTACCGAAGTC
TTTTTGACGCCATCTTGGATGCTGTTTACGCCGCGCTGGAGAAAACCGGC
GGGGGGTCGCTGGGCATCGTGATATCAGAGAGTGGGTGGCCGACGGCTGG
TGGTGACGGAGCGTTGACGAATGTTGATAATGCAAGGACTTATAATAATA
ACTTGATACAACATGTGAAGCGAGGGTCACCAAAGAGGCCTGGAAGGCCT
ATTGAGACTTACATCTTTGCTATGTTTGATGAGAATGGCAAAACGGGACC
TGAGATTGAGAGGCATTGGGGACTTTTTGCTCAACTAGGCAGCCTAGATA
CCAGATTAATTTTAATTAATTAACCAAGCTAAAGCAGCTGCATGCACCAA
CAGGATTCGAGGTAATATTTATAATGGAATAANTTCTACCATATGTACTA
GTGGATAAGAAGTTGGATCACCACCTTGTATGGGTGCATGAGGGCAAANT
TCGTGAACAATAATAATGTCAATGGNTACGGNTTTGCAAAGCTTAATTAT
ATACTACGNTCGATCCTCTTTGTGTACACGTGTAAGAACATTTAAAGGAT
GATTGATGTTGAATACAATTTATCTACAGGCTTAAATTAAACTAATGGGT
ATTCTATGAAACAAACTGATTGATTT
back to top