EY659142

Overview
NameEY659142
Unique NameEY659142
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659142_ssr612 microsatellite EY659142_ssr612:612..623. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7713 contig Csv1_Contig7713:450..1376. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.924e-34
Identity = 83/201 (41.29%), Postives = 121/201 (60.20%), Query Frame = 3
Query:   15 NAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYR-PILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGS-LSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGG-DGALTNVDNARTYNNNLIQHVKR----GSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAQLGS 593
            N++   G+ N IKV T +   +L  SFPPS G+F+++   P++ PL++FLN   S   LN++PYF  + N    SLD+ALF+   T     + L YR+L D +LD+V  A+ K G   + + ISE+GWP  G  D    N+ NA TYN NLI+ +      G+P RPG PI T++F++F+EN K+G   +RHWG+    GS
Sbjct:  157 NSLRLHGIHN-IKVGTPLAMDSLRSSFPPSNGTFREEITGPVMLPLLKFLNGTNSYFFLNVHPYFRWSRNPMNTSLDFALFQGHSTYTDPQTGLVYRNLLDQMLDSVLFAMTKLGYPHMRLAISETGWPNFGDIDETGANILNAATYNRNLIKKMSASPPIGTPSRPGLPIPTFVFSLFNENQKSGSGTQRHWGILHPDGS 356          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 3.233e-33
Identity = 75/194 (38.66%), Postives = 114/194 (58.76%), Query Frame = 3
Query:   12 QNAINAAGLGNQIKVSTAIETGALGESFP-PSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVK--RGSPKRPGRPIETYIFAMFDENGKTGPE--IERHWGLF 578
            Q AI  AGL NQ+KV+  +       S   PS G F+ + R ++  +++FL+EN  P  +N+YPY ++  N    +DYA F      ++DG   Y ++FDA  D +  ALEK G G++ I+I E GWPT G   A  N+D A+ +N   + H+   +G+P+RPG PI+ Y+F++ DE+ K+      ERHWG+F
Sbjct:  139 QIAIIKAGLQNQVKVTCPLNADVYDSSTTFPSGGDFRANIRDLMITIVKFLSENGGPFTVNIYPYISLYTNPDFPVDYAFFDGNAQPLNDGGTFYYNMFDANYDTLVHALEKNGFGNMPIIIGEIGWPTDGDSNA--NLDYAKKFNQGFMAHISGGKGTPRRPG-PIDAYLFSLIDEDAKSVQPGYFERHWGIF 329          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 4.669e-32
Identity = 76/195 (38.97%), Postives = 120/195 (61.54%), Query Frame = 3
Query:   18 AINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYF-AIAGNRQISLDYALFR----SQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGAL-TNVDNARTYNNNLIQHV--KRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLF 578
            A+ +A L   IKVST + T  + + FPPS+  F +    ++ PL+ FL    S L++N+YPY   +  N  I LDYALF+    +++ V ++  + Y + FDA++DA Y A+      ++ ++++ESGWP+ G        +DNA TYN+NLI+HV  K G+PKRPG  + TYI+ +++E+ K G   E++WGLF
Sbjct:  147 ALLSANLDKLIKVSTPLSTSLILDPFPPSQAFFNRSLNAVIVPLLSFLQSTNSYLMVNVYPYIDYMQSNGVIPLDYALFKPIPPNKEAVDANTLVRYSNAFDAMVDATYFAMAFLNFTNIPVLVTESGWPSKGETNEPDATLDNANTYNSNLIRHVLNKTGTPKRPGIAVSTYIYELYNEDTKAGLS-EKNWGLF 340          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 4.669e-32
Identity = 72/192 (37.50%), Postives = 122/192 (63.54%), Query Frame = 3
Query:   18 AINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVS-DGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGAL-TNVDNARTYNNNLIQHV--KRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLF 578
            A+   GL  Q+ V++A     L  S+PPS GSFK+++   L PL+ F ++  SP L+N YP+FA   + +++ L+Y LF+  Q +V  + +L Y ++  A +DA+Y+A++  G   + + ISE+GWP+ G +  +  + +NA  YN NL++ +  ++G+P +   PI+ Y+FA+F+EN K GP  ER++GLF
Sbjct:  145 ALTNLGLEKQVTVTSAHSLDILSTSYPPSSGSFKEEFIQYLQPLLDFHSQIESPFLINAYPFFAYKDSPKEVPLEYVLFQPNQGMVDPNTNLHYDNMLFAQVDALYSAIKTLGHTDIEVRISETGWPSKGDENEIGASPENAALYNGNLLKLIQQRKGTPAKQSVPIDVYVFALFNENLKPGPVSERNYGLF 336          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.317e-31
Identity = 73/196 (37.24%), Postives = 116/196 (59.18%), Query Frame = 3
Query:   15 NAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNR-QISLDYALFR----SQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAG-GDGALTNVDNARTYNNNLIQHV--KRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLF 578
            NA+ A+ L  QIKVST      + ++FPPS+  F Q +  I+ PL++FL++  SPL++NLYPY+    N+  + LD  LF     S++ V  +  L Y ++ DA++DA Y +++      + ++++ESGWP+ G        +DNA TYN+NLI+HV  + G+P  P      YI+ +F+E+ +  P  E  WGLF
Sbjct:   49 NALVASNLHTQIKVSTPHAASIMLDTFPPSQAYFNQTWHSIMVPLLQFLSKTGSPLMMNLYPYYVYMQNKGVVPLDNCLFEPLTPSKEMVDPNTLLHYTNVLDAMVDAAYVSMKNLNVSDVAVLVTESGWPSKGDSKEPYATIDNADTYNSNLIKHVFDRTGTPLHPEMTSSVYIYELFNEDLRAPPVSEASWGLF 244          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.742e-31
Identity = 73/200 (36.50%), Postives = 116/200 (58.00%), Query Frame = 3
Query:   18 AINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIA-GNRQISLDYALFRS----QQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGG-DGALTNVDNARTYNNNLIQHV--KRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAQLGS 593
            A+ A+ L  ++KVS+ +    + + FPPS  +F   +   +  L++FL    S  +LN YPY+     N    LDYALF+     +Q V  +  L Y S+FDA++DA Y ++E      + +V++E+GWP++GG D A   V NA T+N NLI+ V    G P +P  PI TYI+ +++E+ ++GP  ER+WG+    G+
Sbjct:  141 ALVASNLNFKVKVSSPMSMDIMPKPFPPSTSTFSPSWNTTVYQLLQFLKNTGSFFMLNAYPYYGYTTANGIFPLDYALFKQLSPVKQIVDPNTLLHYNSMFDAMVDAAYYSMEALNFSKIPVVVTETGWPSSGGSDEAAATVANAETFNTNLIKRVLNNSGPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGT 340          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.310e-29
Identity = 79/195 (40.51%), Postives = 113/195 (57.95%), Query Frame = 3
Query:   18 AINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGS-LSYRSLFDAILDAVYAALEKTGGG--SLGIVISESGWPTAGGDGAL-TNVDNARTYNNNLIQHV---KRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLF 578
            A+   GL  QI V+TA     L  S+PPS  SF++D    L P++ F  +  SP+L+N YP+FA   N + +SLD+ LF+  Q     GS   Y ++  A +DAVY AL+  G     + IV+SE+GWP+ G    +    DNAR YN NLI+ +   K  +P RP   +  ++FA+F+EN K GP  ER++GLF
Sbjct:  142 ALVDCGLNKQIFVTTAHSLAILDVSYPPSATSFRRDLLGSLTPILDFHVKTGSPILINAYPFFAYEENPKHVSLDFVLFQPNQGFTDPGSNFHYDNMLFAQVDAVYHALDAVGISYKKVPIVVSETGWPSNGDPQEVGATCDNARKYNGNLIKMMMSKKMRTPIRPECDLTIFVFALFNENMKPGPTSERNYGLF 336          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.406e-28
Identity = 77/197 (39.09%), Postives = 112/197 (56.85%), Query Frame = 3
Query:    6 RPQNAINAAGLGNQIKVSTAIETGALGESFP-PSRGSFKQDYRPILDP-LIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGS-LSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGAL-TNVDNARTYNNNLIQHVK--RGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLF 578
            R   A+ A GL   ++V+T    G L  S   PS  SF+  Y   L P +++F  +  SP ++N YPYF+    R  +L+YALFR    +    + L+Y S+ DA +DA+Y A++K G G + I + E+GWPT    G +   V  AR +N  +I+     +G+P  P R  ETY+F++FDEN K GP  ERH+GLF
Sbjct:  142 RLAQALKAEGLTG-VRVTTPHYLGILAPSDGIPSNASFRAGYNTKLFPAMLQFHRDTGSPFMVNPYPYFSY---RPETLNYALFRPNSGIYDPATKLNYTSMLDAQMDAIYTAMKKLGYGDVDIAVGEAGWPTQAEPGQIGVGVQEARDFNEGMIRVCSSGKGTPLMPNRTFETYLFSLFDENQKPGPIAERHFGLF 334          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E138_ARATH (Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 9.112e-28
Identity = 70/197 (35.53%), Postives = 111/197 (56.35%), Query Frame = 3
Query:   12 QNAINAAGLGNQIKVSTAIETGALGE--SFP-PSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHV--KRGSPKRPGRPIETYIFAMFDENGKT---GPEIERHWGLF 578
            QNA+N AGLGN +K +  +         S P PS G F+ D    +  ++ FL +N +P+ +N+YP+ ++ GN    L+YA F   +  ++D  + Y ++FDA  D + ++L+  G G + I++ E GWPT G   A  N  +A  + N L+  +   +G+P RP   IE Y+F + DE+ K+   GP  ERHWG+F
Sbjct:  141 QNALNEAGLGNSVKATVPLNADVYDSPASNPVPSAGRFRPDIIGQMTQIVDFLGKNNAPITINIYPFLSLYGNDDFPLNYAFFDGAEP-INDNGIDYTNVFDANFDTLVSSLKAVGHGDMPIIVGEVGWPTEGDKHA--NAGSAYRFYNGLLPRLGTNKGTPLRP-TYIEVYLFGLLDEDAKSIAPGP-FERHWGIF 332          
BLAST of EY659142 vs. ExPASy Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.007e-26
Identity = 65/194 (33.51%), Postives = 109/194 (56.19%), Query Frame = 3
Query:   12 QNAINAAGLGNQIKVSTAIETGAL-GESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLI--QHVKRGSPKRPGRPIETYIFAMFDENGKT--GPEIERHWGLF 578
            Q+AI  AGL  Q+KV+  +        S  PS G F+ + R ++  +++FL++N +P  +N+YP+ ++  +    +++A F    T ++D    Y ++ DA  D +  +L+K G G+L I++ E GWPT G   A  N+  AR YN   +  Q   +G+P RPG  ++ Y+F + DE+ K+      ERHWG+F
Sbjct:  144 QSAIIKAGLATQVKVTVPLNADVYQSASNLPSDGDFRPEIRDLMLNIVKFLSDNGAPFTINIYPFISLYNDPNFPVEFAFFDGTGTPINDNGRIYDNVLDANYDTLVWSLQKNGFGNLTIIVGEVGWPTDGDKNA--NLMYARRYNQGFMNRQKANKGTPMRPG-AMDAYLFGLIDEDAKSIQPGNFERHWGIF 334          
The following BLAST results are available for this feature:
BLAST of EY659142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
EA6_ARATH2.924e-3441.29Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E136_ARATH3.233e-3338.66Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis ... [more]
E132_ARATH4.669e-3238.97Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E1314_ARATH4.669e-3237.50Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E131_ARATH2.317e-3137.24Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E134_ARATH6.742e-3136.50Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E1310_ARATH6.310e-2940.51Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
E13B_WHEAT1.406e-2839.09Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E138_ARATH9.112e-2835.53Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis ... [more]
E135_ARATH1.007e-2633.51Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-H02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659142 ID=EY659142; Name=EY659142; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCAAAACGCCATCAACGCAGCCGGCCTTGGAAACCAAATC
AAGGTTTCCACTGCCATCGAAACTGGAGCTCTTGGCGAATCTTTCCCTCC
GTCAAGAGGCTCATTTAAACAAGATTACAGACCCATTCTTGATCCCCTCA
TTCGTTTCCTCAACGAAAACAGATCCCCCTTGCTTCTCAACCTGTACCCT
TACTTCGCAATTGCTGGTAACCGCCAAATATCTCTGGATTATGCACTATT
TAGGTCACAACAGACGGTCGTTTCCGACGGATCGTTAAGTTACCGAAGTC
TTTTTGACGCCATCTTGGATGCTGTTTACGCCGCGCTGGAGAAAACCGGC
GGGGGGTCGCTGGGCATCGTGATATCAGAGAGTGGGTGGCCGACGGCTGG
TGGTGACGGAGCGTTGACGAATGTTGATAATGCAAGGACTTATAATAATA
ACTTGATACAACATGTGAAGCGAGGGTCACCAAAGAGGCCTGGAAGGCCT
ATTGAGACTTACATCTTTGCTATGTTTGATGAGAATGGCAAAACGGGACC
TGAGATTGAGAGGCATTGGGGACTTTTTGCTCAACTAGGCAGCCTAGATA
CCAGATTAATTTTAATTAATTAACCAAGCTAAAGCAGCTGCATGCACCAA
CAGGATTCGAGGTAATATTTATAATGGAATAANTTCTACCATATGTACTA
GTGGATAAGAAGTTGGATCACCACCTTGTATGGGTGCATGAGGGCAAANT
TCGTGAACAATAATAATGTCAATGGNTACGGNTTTGCAAAGCTTAATTAT
ATACTACGNTCGATCCTCTTTGTGTACACGTGTAAGAACATTTAAAGGAT
GATTGATGTTGAATACAATTTATCTACAGGCTTAAATTAAACTAATGGGT
ATTCTATGAAACAAACTGATTGATTT
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