EY659141

Overview
NameEY659141
Unique NameEY659141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659141 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOL6 (Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 3.011e-12
Identity = 40/115 (34.78%), Postives = 58/115 (50.43%), Query Frame = 3
Query:  264 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-----TSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIG 572
            +ISGGH NPAVT G + GG       + Y IAQ++G  VA  LL  + +G+T      S FA +        G    +A+V E+V++ G +  ++       K +    APIAIG
Sbjct:   56 HISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT---DKFAPAGFAPIAIG 167          

HSP 2 Score: 33.4982 bits (75), Expect = 3.011e-12
Identity = 13/37 (35.14%), Postives = 21/37 (56.76%), Query Frame = 1
Query:  631 SSVIRASFGKLELGQHWVYWVGPLIGGGLAGIVYEVL 741
            S+ +    G   L Q W +WV P++GG + G++Y  L
Sbjct:  190 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTL 226          
BLAST of EY659141 vs. ExPASy Swiss-Prot
Match: AQPZ_ECO57 (Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 3.011e-12
Identity = 40/115 (34.78%), Postives = 58/115 (50.43%), Query Frame = 3
Query:  264 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-----TSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIG 572
            +ISGGH NPAVT G + GG       + Y IAQ++G  VA  LL  + +G+T      S FA +        G    +A+V E+V++ G +  ++       K +    APIAIG
Sbjct:   56 HISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT---DKFAPAGFAPIAIG 167          

HSP 2 Score: 33.4982 bits (75), Expect = 3.011e-12
Identity = 13/37 (35.14%), Postives = 21/37 (56.76%), Query Frame = 1
Query:  631 SSVIRASFGKLELGQHWVYWVGPLIGGGLAGIVYEVL 741
            S+ +    G   L Q W +WV P++GG + G++Y  L
Sbjct:  190 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTL 226          
BLAST of EY659141 vs. ExPASy Swiss-Prot
Match: AQPZ_RHOPA (Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ PE=3 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 5.069e-12
Identity = 51/170 (30.00%), Postives = 69/170 (40.59%), Query Frame = 3
Query:  102 LAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGV----------GAWNAV---VFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIG 572
            LAE I T    FAG GS +        G                          +ISG H+NPAVT G   GG   + +   Y IAQ+LG+  A  LL  + +G   + F L+ G           G +N V   V E+VMT   ++ +  +     K   G  AP+AIG
Sbjct:    7 LAEMIGTFWLTFAGCGSAVIAAGFPQVGIGLVGVSLAFGLSVVTMAYAIG----HISGCHLNPAVTLGLAAGGRFPVKQIAPYIIAQVLGAIAAAALLYLIASG--AAGFDLAKGFASNGYGAHSPGQYNLVACFVMEVVMTMMFLFVIMGST--HGKAPAG-FAPLAIG 167          

HSP 2 Score: 40.817 bits (94), Expect = 5.069e-12
Identity = 15/29 (51.72%), Postives = 21/29 (72.41%), Query Frame = 1
Query:  655 GKLELGQHWVYWVGPLIGGGLAGIVYEVL 741
            G   +GQ W++WV PL+GG L G++Y VL
Sbjct:  198 GGWAIGQLWLFWVAPLLGGVLGGVIYRVL 226          
BLAST of EY659141 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 5.288e-11
Identity = 51/178 (28.65%), Postives = 79/178 (44.38%), Query Frame = 3
Query:   90 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVXANIXCGGAFDGAS 623
            L+  +AE I T   +FAG GS +A NK+ +     P                       ISG H NPAVT    + G     +  LY IAQL+GS +A   L  + +    + F          ++  EI+++F L++ +   A D +  ++G +A IA+G  +  N+   G   GAS
Sbjct:   42 LQKLIAEAIGTYFVIFAGCGS-VAVNKI-YGSVTFPGICVTWGLIVMVMVYTVGY----ISGAHFNPAVTITFSIFGRFPWKQVPLYIIAQLMGSILASGTLALLFDVTPQAYFGTVPVGSNGQSLAIEIIISFLLMFVISGVATDDR--AIGQVAGIAVGMTITLNVFVAGPISGAS 211          

HSP 2 Score: 25.7942 bits (55), Expect = 5.288e-11
Identity = 10/21 (47.62%), Postives = 13/21 (61.90%), Query Frame = 1
Query:  679 WVYWVGPLIGGGLAGIVYEVL 741
            WVY VGP+IG      VY ++
Sbjct:  231 WVYVVGPIIGTLAGAFVYNLI 251          
The following BLAST results are available for this feature:
BLAST of EY659141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
AQPZ_ECOL63.011e-1234.78Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV... [more]
AQPZ_ECO573.011e-1234.78Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE... [more]
AQPZ_RHOPA5.069e-1230.00Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ ... [more]
NIP1_NICAL5.288e-1128.65Probable aquaporin NIP-type OS=Nicotiana alata PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-H01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659141 ID=EY659141; Name=EY659141; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGCTTCATCGTTTGATCTCCATCATGCCGATCAGAAACATT
GCCGTTGGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGGCAGC
CCTAGCAGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCT
CGGGCATGGCCTTCAACAAGCTCACTCACAACGGCGCCAACACCCCCTCC
GGCCTCGTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGT
CGCCGTTGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCT
TTGGCGCCTTCGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCTCTAC
TGGATCGCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTT
CGTTACCAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTG
GTGCATGGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTG
TACACAGTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGAC
AATTGCACCAATTGCAATTGGTTTCATTGTANGAGCCAACATCTNNTGCG
GCGGGGCGTTTGATGGAGCTTCATGAANCCAGCAGTGTCATTCGGGCCAG
CTTTGGTAAGCTGGAGCTGGGACAACACTGGGTCTACTGGGTCGGGCCAC
TCATCGGTGGTGGGCTAGCTGGCATCGTCTACGAAGTCCTCTTCATTAAC
AGTCTCCGAGCAGCTCCCACAACCGAGTACTAAGCTAAAGCTTGCATCTA
TGGGAGTTGCACNGATGGTGTATTAATTTTGCTTTACGGAGTTCTTTCTT
TTATTTTAATTGGGTTTATTAAAAAAAAAAAAAAAAAAGGCGNCGNTCT
back to top