EY659140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_SYNS3 (50S ribosomal protein L28 OS=Synechococcus sp. (strain CC9311) GN=rpmB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.267e-14 Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TG ++N VS S+ +T K Q NLQ +++WW GKR++ LR++T+ALKTI+K GL A A+ GI+L K Sbjct: 3 RVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGKRWINLRITTRALKTIQKKGLGAYARSLGINLAK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_SYNS9 (50S ribosomal protein L28 OS=Synechococcus sp. (strain CC9902) GN=rpmB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.822e-14 Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TG ++N VS S+ +T K Q NLQ +++WW G R++KLR++T+ALKTI+K GL AK GI+L K Sbjct: 3 RVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGNRWIKLRVTTRALKTIQKKGLGPYAKSLGINLAK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_SYNPX (50S ribosomal protein L28 OS=Synechococcus sp. (strain WH8102) GN=rpmB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.822e-14 Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TG ++N VS S+ +T K Q NLQ +++WW GKR+V LR++T+ALKTI+K GL AK GI+L K Sbjct: 3 RVCQLTGTRANNGMAVSHSHIRTKKLQQANLQNRRLWWAEGKRWVNLRVTTRALKTIQKKGLGPYAKSLGINLAK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_GLOVI (50S ribosomal protein L28 OS=Gloeobacter violaceus GN=rpmB PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.814e-14 Identity = 37/75 (49.33%), Postives = 53/75 (70.67%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 R C TGKK+N A VSFS+ + + Q NLQ+K++W + +V+L+LSTKA+KT+E L A+AK+AG+DL K Sbjct: 3 RKCMLTGKKANNAYSVSFSHRRNKRLQMANLQWKRIWDDQQGCFVRLKLSTKAIKTLEHRSLHALAKEAGLDLSK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_PROMT (50S ribosomal protein L28 OS=Prochlorococcus marinus (strain NATL2A) GN=rpmB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.401e-13 Identity = 34/75 (45.33%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TG ++N VS S+ +T K Q NLQ +++WWE +++ +R++T+ALKTI+K GL AK G+DL K Sbjct: 3 RVCQLTGTRANNGMSVSHSHIRTKKLQQANLQQRRLWWEEENKWINIRVTTRALKTIQKKGLGKYAKSLGVDLNK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_PROM1 (50S ribosomal protein L28 OS=Prochlorococcus marinus (strain NATL1A) GN=rpmB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.401e-13 Identity = 34/75 (45.33%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TG ++N VS S+ +T K Q NLQ +++WWE +++ +R++T+ALKTI+K GL AK G+DL K Sbjct: 3 RVCQLTGTRANNGMSVSHSHIRTKKLQQANLQQRRLWWEEENKWINIRVTTRALKTIQKKGLGKYAKSLGVDLNK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_THIDA (50S ribosomal protein L28 OS=Thiobacillus denitrificans (strain ATCC 25259) GN=rpmB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.450e-12 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGKK N VS +N+KT +R NLQY++ W E+ R+V+LRLS AL+TI+KNG+++V Sbjct: 3 RVCVVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRLSNAALRTIDKNGIESV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_VEREI (50S ribosomal protein L28 OS=Verminephrobacter eiseniae (strain EF01-2) GN=rpmB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.506e-12 Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGKK N VS +N+KT +R NLQY++ W E R+V+LR+S+ AL+ I+KNG+DAV Sbjct: 3 RVCDVTGKKPMVGNNVSHANNKTRRRFLPNLQYRRFWVETENRWVRLRVSSAALRLIDKNGIDAV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RK28_GALSU (50S ribosomal protein L28, chloroplastic OS=Galdieria sulphuraria GN=rpl28 PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.885e-12 Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLD 463 R C K SN ANKVS SNHK+ + QFVNLQ KKVW K+++KLR+STK +K + K +D Sbjct: 3 RKCQLLFKTSNTANKVSHSNHKSKRLQFVNLQKKKVWSSLKKKWIKLRISTKMIKILNKKNID 65
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_DIAST (50S ribosomal protein L28 OS=Diaphorobacter sp. (strain TPSY) GN=rpmB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.685e-12 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGKK N VS +N+KT +R NLQY++ W E+ R+V+LR+S+ AL+ I+KNG+D+V Sbjct: 3 RVCEVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDKNGIDSV 67 The following BLAST results are available for this feature:
BLAST of EY659140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659140 ID=EY659140; Name=EY659140; organism=Citrus sinensis; type=EST; length=823bpback to top |