EY659140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_DELAS (50S ribosomal protein L28 OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=rpmB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.685e-12 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGKK N VS +N+KT +R NLQY++ W E+ R+V+LR+S+ AL+ I+KNG+D+V Sbjct: 3 RVCEVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDKNGIDSV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_ACISJ (50S ribosomal protein L28 OS=Acidovorax sp. (strain JS42) GN=rpmB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.685e-12 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGKK N VS +N+KT +R NLQY++ W E+ R+V+LR+S+ AL+ I+KNG+D+V Sbjct: 3 RVCEVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDKNGIDSV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_ACIAC (50S ribosomal protein L28 OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=rpmB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.685e-12 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGKK N VS +N+KT +R NLQY++ W E+ R+V+LR+S+ AL+ I+KNG+D+V Sbjct: 3 RVCDVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDKNGIDSV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_NITMU (50S ribosomal protein L28 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=rpmB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGKK + VS +N+KT +R NLQ ++ W E+ +R++ LRLS +AL+TI+KNG+DAV Sbjct: 3 RVCEVTGKKPMTGHHVSHANNKTKRRFLPNLQRRRFWVESERRWISLRLSNEALRTIDKNGIDAV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_METFK (50S ribosomal protein L28 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=rpmB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGKK N VS +N+KT +R NLQ +K W E+ R+V LR++ AL+TI+KNG+DAV Sbjct: 3 RVCQVTGKKPMVGNNVSHANNKTKRRFLPNLQNRKFWVESENRWVSLRITNAALRTIDKNGIDAV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_CHRVO (50S ribosomal protein L28 OS=Chromobacterium violaceum GN=rpmB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.236e-11 Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGK+ N VS +N+KT +R NLQY+K W E+ R+V+LR+S AL+TI+K G+D V Sbjct: 3 RVCKVTGKRPMTGNNVSHANNKTKRRFLPNLQYRKFWVESENRWVRLRVSNAALRTIDKVGIDVV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_VARPS (50S ribosomal protein L28 OS=Variovorax paradoxus (strain S110) GN=rpmB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGK N VS +N+KT +R NLQY++ W E R+V+LR+S+ AL+ I+KNG+DAV Sbjct: 3 RVCDVTGKGPMVGNNVSHANNKTKRRFLPNLQYRRFWVETENRWVRLRVSSAALRLIDKNGIDAV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_POLNA (50S ribosomal protein L28 OS=Polaromonas naphthalenivorans (strain CJ2) GN=rpmB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 34/74 (45.95%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLR 496 RVC TGK N VS +N+KT +R NLQY+++W E+ R+V+LR++ L+ I+KNG+DAV +DLR Sbjct: 3 RVCQVTGKGPMVGNNVSHANNKTKRRFMPNLQYRRIWVESENRWVRLRITAAGLRLIDKNGIDAVL----VDLR 72
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_LARHH (50S ribosomal protein L28 OS=Laribacter hongkongensis (strain HLHK9) GN=rpmB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.814e-11 Identity = 32/65 (49.23%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGK+ N VS +N+KT +R NLQY++ W E+ R+V++R+S AL+TI+K G+DAV Sbjct: 3 RVCKVTGKRPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRMRVSNAALRTIDKVGIDAV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_ACIF5 (50S ribosomal protein L28 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=rpmB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.814e-11 Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGKK N VS +++KT +R NLQY + W E+ R+V++R+STK ++TI+K G+D V Sbjct: 3 RVCKVTGKKPMAGNNVSHAHNKTRRRFLPNLQYHRFWVESENRWVRMRVSTKGIRTIDKKGIDVV 67 The following BLAST results are available for this feature:
BLAST of EY659140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659140 ID=EY659140; Name=EY659140; organism=Citrus sinensis; type=EST; length=823bpback to top |