EY659140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_ACIF2 (50S ribosomal protein L28 OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=rpmB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.814e-11 Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGKK N VS +++KT +R NLQY + W E+ R+V++R+STK ++TI+K G+D V Sbjct: 3 RVCKVTGKKPMAGNNVSHAHNKTRRRFLPNLQYHRFWVESENRWVRMRVSTKGIRTIDKKGIDVV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_BORPE (50S ribosomal protein L28 OS=Bordetella pertussis GN=rpmB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.982e-11 Identity = 32/65 (49.23%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGK N VS +N+KT +R NLQ ++ W E+ R+V+LR++ KA++TI+KNG+DAV Sbjct: 3 RVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVTAKAIRTIDKNGIDAV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_BORPA (50S ribosomal protein L28 OS=Bordetella parapertussis GN=rpmB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.982e-11 Identity = 32/65 (49.23%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGK N VS +N+KT +R NLQ ++ W E+ R+V+LR++ KA++TI+KNG+DAV Sbjct: 3 RVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVTAKAIRTIDKNGIDAV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_BORBR (50S ribosomal protein L28 OS=Bordetella bronchiseptica GN=rpmB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.982e-11 Identity = 32/65 (49.23%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGK N VS +N+KT +R NLQ ++ W E+ R+V+LR++ KA++TI+KNG+DAV Sbjct: 3 RVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVTAKAIRTIDKNGIDAV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_BORA1 (50S ribosomal protein L28 OS=Bordetella avium (strain 197N) GN=rpmB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.982e-11 Identity = 32/65 (49.23%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGK N VS +N+KT +R NLQ ++ W E+ R+V+LR++ KA++TI+KNG+DAV Sbjct: 3 RVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVTAKAIRTIDKNGIDAV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_DECAR (50S ribosomal protein L28 OS=Dechloromonas aromatica (strain RCB) GN=rpmB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.506e-11 Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGK NKVS +N++T +R NLQY++ W E+ R+++LR+S L+ I+KNG+DAV Sbjct: 3 RVCQVTGKAPMVGNKVSHANNRTKRRFLPNLQYRRFWVESENRFLRLRVSNAGLRLIDKNGIDAV 67
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_PSEPK (50S ribosomal protein L28 OS=Pseudomonas putida (strain KT2440) GN=rpmB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.497e-11 Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TGK N +S +N+KT +R NLQ+ + W E+ KR+V+LR+S K ++ I+K G+DAV +D+RK Sbjct: 3 RVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKRGIDAVL----VDIRK 73
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_PSEPG (50S ribosomal protein L28 OS=Pseudomonas putida (strain GB-1) GN=rpmB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.497e-11 Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TGK N +S +N+KT +R NLQ+ + W E+ KR+V+LR+S K ++ I+K G+DAV +D+RK Sbjct: 3 RVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKRGIDAVL----VDIRK 73
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_PSEP1 (50S ribosomal protein L28 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpmB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.497e-11 Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TGK N +S +N+KT +R NLQ+ + W E+ KR+V+LR+S K ++ I+K G+DAV +D+RK Sbjct: 3 RVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKRGIDAVL----VDIRK 73
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_BORPD (50S ribosomal protein L28 OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=rpmB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.497e-11 Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAV 469 RVC TGK N VS +N+KT +R NLQ ++ W E+ R+V+LR+S KA++ I+KNG+DAV Sbjct: 3 RVCQVTGKGPMTGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSAKAIRIIDKNGIDAV 67 The following BLAST results are available for this feature:
BLAST of EY659140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659140 ID=EY659140; Name=EY659140; organism=Citrus sinensis; type=EST; length=823bpback to top |