EY659100

Overview
NameEY659100
Unique NameEY659100
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659100_ssr363 microsatellite EY659100_ssr363:363..382. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8042 contig Csv1_Contig8042:34..922. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.360e-27
Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 3 
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            EL PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L   ++FA+ WVPFCKK++++ RAP  YF
Sbjct:  357 ELAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSYTAEFARKWVPFCKKFSIEPRAPEWYF 440

HSP 2 Score: 33.113 bits (74), Expect = 2.360e-27
Identity = 15/38 (39.47%), Postives = 19/38 (50.00%), Query Frame = 1 
Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W  + +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  311 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLR 348
[Close]
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.361e-27
Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 3 
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            EL  VD+FV+T D   EPP+IT NTVLS+LAVDYPV ++ACYVSDD  + L F +L E ++FA+ WVPFCKKY ++ RAP  YF
Sbjct:  339 ELAGVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDRVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYTIEPRAPEWYF 422

HSP 2 Score: 33.8834 bits (76), Expect = 2.361e-27
Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1 
Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W ++ +CE  F   W+L    KW P+  +TY  RL  R
Sbjct:  293 WLISVICEIWFAVSWVLDQFPKWYPIERETYLDRLSLR 330
[Close]
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 5.207e-27
Identity = 50/83 (60.24%), Postives = 64/83 (77.11%), Query Frame = 3 
Query:  411 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            L  VD+FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  S L F SL E ++FA+ WVPFCKK++++ RAP  YF
Sbjct:  343 LSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYF 425

HSP 2 Score: 33.4982 bits (75), Expect = 5.207e-27
Identity = 15/38 (39.47%), Postives = 19/38 (50.00%), Query Frame = 1 
Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W  + +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  296 WLTSIICEIWFAVSWILDQFPKWYPIDRETYLDRLSLR 333
[Close]
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 5.207e-27
Identity = 50/83 (60.24%), Postives = 64/83 (77.11%), Query Frame = 3 
Query:  411 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            L  VD+FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  S L F SL E ++FA+ WVPFCKK++++ RAP  YF
Sbjct:  343 LSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYF 425

HSP 2 Score: 33.4982 bits (75), Expect = 5.207e-27
Identity = 15/38 (39.47%), Postives = 19/38 (50.00%), Query Frame = 1 
Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W  + +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  296 WLTSIICEIWFAVSWILDQFPKWYPIDRETYLDRLSLR 333
[Close]
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.502e-26
Identity = 56/116 (48.28%), Postives = 72/116 (62.07%), Query Frame = 3 
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXLPADWKNMKKEYDKLSQT*N 755
            ELP VD+FV TAD   EPP++ ++TVLS++A DY   KL  Y+SDDA S L FY L EAS+FAK W+PFCKKY V+ R+P  YF             P +W  MK+ Y  ++   N
Sbjct:  110 ELPSVDIFVCTADPTAEPPMLVISTVLSVMAYDYLPEKLNIYLSDDAGSVLTFYVLCEASEFAKHWIPFCKKYKVEPRSPAAYFAKVASPPDGCG--PKEWFTMKELYKDMTDRVN 223

HSP 2 Score: 32.7278 bits (73), Expect = 1.502e-26
Identity = 12/39 (30.77%), Postives = 21/39 (53.85%), Query Frame = 1 
Query:  169 FAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQE 285
            +AW      E  F F W+L ++ +W P+  +T+  RL +
Sbjct:   66 WAWLGMLAAELWFGFYWVLTLSVRWCPVYRRTFKDRLAQ 104
[Close]
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.292e-26
Identity = 57/124 (45.97%), Postives = 78/124 (62.90%), Query Frame = 3 
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDKLSQT*NMQPKDL 773
            +LP +DMFV+TAD E EPP++T NT+LS+LA DYPV KLACYVSDD  + L F ++ EA+ FA +WVPFC+K+N++ R P  YF                 D + +K+EYD+     N  P  +
Sbjct:  374 DLPGLDMFVSTADPEKEPPLVTSNTILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFANMWVPFCRKHNIEPRNPDSYFSLKRDPYKNKVKADFVKDRRRVKREYDEFKVRINSLPDSI 497

HSP 2 Score: 22.7126 bits (47), Expect = 3.292e-26
Identity = 11/38 (28.95%), Postives = 18/38 (47.37%), Query Frame = 1 
Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W ++ +CE  F   W+L    K  P+   T    L+E+
Sbjct:  323 WGMSVVCELWFALSWLLDQLPKLCPINRATDLNVLKEK 360
[Close]
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.614e-26
Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 3 
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRY 656
            +LP +D+FV TAD  +EPP++ VNTVLS+ A+DYP  KLA Y+SDD  S L FY+L EA++FAK WVPFCKK+NV+  +P  Y
Sbjct:  107 DLPRLDVFVCTADPVIEPPLLVVNTVLSVTALDYPPEKLAVYLSDDGGSELTFYALTEAAEFAKTWVPFCKKFNVEPTSPAAY 189

HSP 2 Score: 31.187 bits (69), Expect = 5.614e-26
Identity = 11/38 (28.95%), Postives = 19/38 (50.00%), Query Frame = 1 
Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            WF+ F+ E  F   W++  + +W P+    +  RL  R
Sbjct:   66 WFVMFIVEIWFGLYWVVTQSSRWNPVWRFPFSDRLSRR 103
[Close]
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.611e-25
Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 3 
Query:  405 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXLPADWKNMKKEYDKLSQ 746
            Q LP VD+FV TAD + EPP + ++T+LS++A +YP  K++ Y+SDD  S L FY+L EAS FAK W+PFCK+YN++ R+P  YF            +P +W  +K  Y+++ +
Sbjct:  100 QNLPGVDIFVCTADPQSEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASIFAKKWLPFCKRYNIEPRSPAAYF--SESKVHHNLCIPKEWALIKNLYEEMRE 211

HSP 2 Score: 30.4166 bits (67), Expect = 1.611e-25
Identity = 12/39 (30.77%), Postives = 18/39 (46.15%), Query Frame = 1 
Query:  172 AWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            AW      E  F   W++  + +W P   +T+  RL ER
Sbjct:   59 AWLGMAAAELWFAVYWVIAQSVRWRPFRRRTFRDRLAER 97
[Close]
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.588e-25
Identity = 55/122 (45.08%), Postives = 78/122 (63.93%), Query Frame = 3 
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXLP--ADWKNMKKEYDKLSQT*NMQPK 767
            +LP +D+FV+TAD E EPP++T NT+LS+LAVDYPV KLACY+SDD  + L F +L + + FA  WVPFC+K+N++ R P  YF            L    + + +K+EYD+     N  P+
Sbjct:  398 DLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAQTASFASTWVPFCRKHNIEPRNPEAYFGQKRNFLKNKVRLDFVRERRRVKREYDEFKVRINSLPE 519

HSP 2 Score: 21.1718 bits (43), Expect = 4.588e-25
Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 1 
Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W ++  CE  F   W+L    K  P+   T    L+ER
Sbjct:  347 WGMSTTCELWFALSWLLDQLPKLCPVNRLTDLGVLKER 384
[Close]
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.514e-24
Identity = 55/128 (42.97%), Postives = 79/128 (61.72%), Query Frame = 3 
Query:  396 NRIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDKLSQT*NMQPKDL 773
            N   +LP +D+FV+TAD E EPP++T NT+LS+LA DYPV KL+CYVSDD  + L F ++ EA+ FA +WVPFC+K++++ R P  YF                 D + +K+EYD+     N  P  +
Sbjct:  392 NGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRSDFVKDRRRVKREYDEFKVRINSLPDSI 519
The following BLAST results are available for this feature:
BLAST of EY659100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA9_ARATH2.360e-2760.71Probable cellulose synthase A catalytic subunit 9 ... [more]
CESA5_ARATH2.361e-2760.71Cellulose synthase A catalytic subunit 5 [UDP-form... [more]
CESA9_ORYSJ5.207e-2760.24Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA9_ORYSI5.207e-2760.24Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CSLE2_ORYSJ1.502e-2648.28Cellulose synthase-like protein E2 OS=Oryza sativa... [more]
CSLD3_ARATH3.292e-2645.97Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]
CSLE1_ARATH5.614e-2659.04Cellulose synthase-like protein E1 OS=Arabidopsis ... [more]
CSLE1_ORYSJ1.611e-2543.86Cellulose synthase-like protein E1 OS=Oryza sativa... [more]
CSLD5_ARATH4.588e-2545.08Cellulose synthase-like protein D5 OS=Arabidopsis ... [more]
CSLD2_ORYSJ1.514e-2442.97Cellulose synthase-like protein D2 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659100 ID=EY659100; Name=EY659100; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGTTTTTCAAGCTCATGGCCAATACAAAGTCGTCATGTCT
CCCTCTATACGAAAAAGTTTTTCATAAAAACACATATCATAGGGCTTTAG
ATGTTATCATCTTGTTCCTTCTTCTATGTCTGCTCTTCTATCGGCTCTCA
ACGTTGAAGAATCATGGATTTGCTTGGTTTCTTGCTTTTCTATGTGAGTC
TTGTTTTACTTTCATCTGGATTCTCATCGTCAACTGCAAGTGGACTCCTT
TGACCTACAAAACATATCCCCAACGTCTCCAAGAAAGGTAACAAATCAAA
TAACGTTAGCATTAATAATTTCCGCATCATTTGCAATTGTCTTTGTCATT
TTGCAAGTTACTACACACACACACACACACACATGTGTACGACTCAACAG
GATACAGGAGCTGCCCCCAGTGGACATGTTTGTGACAACTGCTGATGCTG
AACTCGAGCCGCCAATCATCACTGTAAACACAGTGCTGTCTTTGTTGGCA
GTTGATTATCCAGTTCACAAGCTCGCTTGCTATGTTTCTGATGATGCCTG
CTCACCTCTCAATTTCTACTCTCTTGTTGAAGCTTCTAAATTCGCTAAGC
TTTGGGTTCCATTCTGTAAAAAGTATAATGTTCAAATTAGAGCTCCCTTT
AGATACTTCCCAGATAGTGAGCCGTCCGATTCCAGNTCAGGGGGACTCCC
TGCAGACTGGAAAAACATGAAGAAAGAGTATGATAAACTTAGCCAAACAT
AGAACATGCAGCCAAAAGACCTTCTTTATTTGATCTAACAAGAAGAATGA
CTGNTTTCTCCAATACAGAACGCATGAATCATCCCACAATAGTGAAGGTA
TATCCGGAGAACAAGGGAGGCCTCTCAGATGAGATCCA
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