EY659100

Overview
NameEY659100
Unique NameEY659100
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659100_ssr363 microsatellite EY659100_ssr363:363..382. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8042 contig Csv1_Contig8042:34..922. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.514e-24
Identity = 55/128 (42.97%), Postives = 79/128 (61.72%), Query Frame = 3
Query:  396 NRIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDKLSQT*NMQPKDL 773
            N   +LP +D+FV+TAD E EPP++T NT+LS+LA DYPV KL+CYVSDD  + L F ++ EA+ FA +WVPFC+K++++ R P  YF                 D + +K+EYD+     N  P  +
Sbjct:  392 NGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRSDFVKDRRRVKREYDEFKVRINSLPDSI 519          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.977e-24
Identity = 54/122 (44.26%), Postives = 78/122 (63.93%), Query Frame = 3
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXLP--ADWKNMKKEYDKLSQT*NMQPK 767
            +LP +D+FVT+AD E EPP++T NT+LS+LA DYPV KLACY+SDD  + L+F +L E + FA+ WVPFC+K+ V+ R P  YF            +    + + +K+EYD+     N  P+
Sbjct:  407 DLPGIDVFVTSADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHGVEPRCPEAYFGQKRDFLKNKVRVDFVRERRKVKREYDEFKVRVNSLPE 528          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.901e-24
Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 3
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDKLSQT*NMQPKDL 773
            +LP +D+FV+TAD E EP + T  T+LS+LAVDYPV KLACYVSDD  + L F ++ EA+ FA +WVPFCKK++++ R P  YF                 D + +K+E+D+     N  P  +
Sbjct:  377 DLPGLDVFVSTADPEKEPVLTTATTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFANVWVPFCKKHDIEPRNPDSYFSVKGDPTKGKRRNDFVKDRRRVKREFDEFKVRINGLPDSI 500          

HSP 2 Score: 26.1794 bits (56), Expect = 2.901e-24
Identity = 12/38 (31.58%), Postives = 20/38 (52.63%), Query Frame = 1
Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W ++ +CE  F F W+L +  K  P+   T    L+E+
Sbjct:  326 WGMSIVCELWFAFSWLLDMLPKVNPVNRSTDLAVLKEK 363          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.775e-24
Identity = 52/124 (41.94%), Postives = 76/124 (61.29%), Query Frame = 3
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDKLSQT*NMQPKDL 773
            +LP  D+FV+TAD E EPP++T NT+LS+LA +YPV KL+CYVSDD  + L F ++ EA+ FA +WVPFC+K+ ++ R P  YF                 D + +K+E+D+     N  P  +
Sbjct:  377 DLPGFDVFVSTADPEKEPPLVTANTILSILAAEYPVEKLSCYVSDDGGALLTFEAMAEAASFANIWVPFCRKHAIEPRNPDSYFSLKRDPYKNKVKSDFVKDRRRVKREFDEFKVRVNSLPDSI 500          

HSP 2 Score: 24.6386 bits (52), Expect = 3.775e-24
Identity = 12/38 (31.58%), Postives = 19/38 (50.00%), Query Frame = 1
Query:  175 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 288
            W ++ +CE  F   W+L    K  P+   T  Q L+E+
Sbjct:  326 WGMSVVCELWFALSWLLDQLPKLCPINRATDLQVLKEK 363          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23
Identity = 47/84 (55.95%), Postives = 67/84 (79.76%), Query Frame = 3
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            +LP +D+FV+TADAE EPP++T NT+LS+L+VDYPV KL+ Y+SDD  S + F ++ EA+ FAK+WVPFC+K+ ++ R P  YF
Sbjct:  202 DLPGIDVFVSTADAEKEPPLVTANTILSILSVDYPVEKLSVYISDDGGSLVTFEAIAEAASFAKIWVPFCRKHKIEPRNPESYF 285          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23
Identity = 55/121 (45.45%), Postives = 75/121 (61.98%), Query Frame = 3
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDKLSQT*NMQP 764
            +LP +D+FV+TAD E EP ++T NT+LS+LA DYPV KLACYVSDD  + L F ++ EA+ FA LWVPFC+K+ ++ R P  YF                 D + +K+EYD+     N  P
Sbjct:  347 DLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRVNGLP 467          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23
Identity = 55/121 (45.45%), Postives = 75/121 (61.98%), Query Frame = 3
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDKLSQT*NMQP 764
            +LP +D+FV+TAD E EP ++T NT+LS+LA DYPV KLACYVSDD  + L F ++ EA+ FA LWVPFC+K+ ++ R P  YF                 D + +K+EYD+     N  P
Sbjct:  347 DLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRVNGLP 467          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.360e-23
Identity = 53/124 (42.74%), Postives = 79/124 (63.71%), Query Frame = 3
Query:  408 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXLPADWKNMKKEYDKLSQT*NMQPKDL 773
            +LP VD+FV+TAD E EPP++T NT+LS+LAVDYP+ KL+ Y+SDD  + L F ++ EA +FA+ WVPFC+K++++ R P  YF                 D + +K+EYD+     N  P+ +
Sbjct:  263 DLPGVDVFVSTADPEKEPPLVTANTLLSILAVDYPIEKLSAYISDDGGAILTFEAMAEAVRFAEYWVPFCRKHDIEPRNPDSYFSIKKDPTKNKKRQDFVKDRRWIKREYDEFKVRINGLPEQI 386          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.850e-22
Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 3
Query:  330 FAIVFVILQVXXXXXXXXCVRLNRIQE-----LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXLPADWKNMKKEYDKLSQ 746
            FA+ +VI Q             NR+ E     LP VD+FV TAD   EPP + ++T+LS++A +YP  K++ Y+SDD  S L FY+L EAS FAK W+PFC++YN++ R+P  YF             P +W  +K  Y+++ +
Sbjct:   65 FAVYWVITQSVRWCPVRRRTFKNRLAERYKENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYFSESEGHHNLCS--PKEWSFIKNLYEEMRE 206          
BLAST of EY659100 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.567e-21
Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = 3
Query:  330 FAIVFVILQVXXXXXXXXCVRLNRIQE---LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 659
            FA ++V+ Q+         V +  + +   LP +D+FVTTAD + EPP+ T NTVLS+LA  YP  K+ CYVSDDA + +   ++VEA++FA LWVPFC+K+ V+ R P  YF
Sbjct:  112 FAFMWVLDQLPKTMPVRRAVDVTALNDDTLLPAMDVFVTTADPDKEPPLATANTVLSILAAGYPAGKVTCYVSDDAGAEVTRGAVVEAARFAALWVPFCRKHGVEPRNPEAYF 224          
The following BLAST results are available for this feature:
BLAST of EY659100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLD2_ORYSI1.514e-2442.97Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD4_ORYSJ1.977e-2444.26Cellulose synthase-like protein D4 OS=Oryza sativa... [more]
CSLD3_ORYSJ2.901e-2443.55Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLD2_ARATH3.775e-2441.94Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD6_ARATH1.281e-2355.95Putative cellulose synthase-like protein D6 OS=Ara... [more]
CSLD1_ORYSJ1.281e-2345.45Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI1.281e-2345.45Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ARATH6.360e-2342.74Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]
CSLE6_ORYSJ1.850e-2238.89Cellulose synthase-like protein E6 OS=Oryza sativa... [more]
CSLF7_ORYSJ1.567e-2146.02Probable mixed-linked glucan synthase 7 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659100 ID=EY659100; Name=EY659100; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGTTTTTCAAGCTCATGGCCAATACAAAGTCGTCATGTCT
CCCTCTATACGAAAAAGTTTTTCATAAAAACACATATCATAGGGCTTTAG
ATGTTATCATCTTGTTCCTTCTTCTATGTCTGCTCTTCTATCGGCTCTCA
ACGTTGAAGAATCATGGATTTGCTTGGTTTCTTGCTTTTCTATGTGAGTC
TTGTTTTACTTTCATCTGGATTCTCATCGTCAACTGCAAGTGGACTCCTT
TGACCTACAAAACATATCCCCAACGTCTCCAAGAAAGGTAACAAATCAAA
TAACGTTAGCATTAATAATTTCCGCATCATTTGCAATTGTCTTTGTCATT
TTGCAAGTTACTACACACACACACACACACACATGTGTACGACTCAACAG
GATACAGGAGCTGCCCCCAGTGGACATGTTTGTGACAACTGCTGATGCTG
AACTCGAGCCGCCAATCATCACTGTAAACACAGTGCTGTCTTTGTTGGCA
GTTGATTATCCAGTTCACAAGCTCGCTTGCTATGTTTCTGATGATGCCTG
CTCACCTCTCAATTTCTACTCTCTTGTTGAAGCTTCTAAATTCGCTAAGC
TTTGGGTTCCATTCTGTAAAAAGTATAATGTTCAAATTAGAGCTCCCTTT
AGATACTTCCCAGATAGTGAGCCGTCCGATTCCAGNTCAGGGGGACTCCC
TGCAGACTGGAAAAACATGAAGAAAGAGTATGATAAACTTAGCCAAACAT
AGAACATGCAGCCAAAAGACCTTCTTTATTTGATCTAACAAGAAGAATGA
CTGNTTTCTCCAATACAGAACGCATGAATCATCCCACAATAGTGAAGGTA
TATCCGGAGAACAAGGGAGGCCTCTCAGATGAGATCCA
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