EY659096

Overview
NameEY659096
Unique NameEY659096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: DCEC_LISMO (Probable glutamate decarboxylase gamma OS=Listeria monocytogenes GN=lmo2434 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.348e-46
Identity = 91/198 (45.96%), Postives = 128/198 (64.65%), Query Frame = 1
Query:    4 RVRNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            R  NI+A L+NAP + S   +G  TVGSSEA ML GLA K +W+N  +  G      +PN++  +  QVCWEKF  Y++V+++ V + + +  +D  K  ++VDE TI V  ILG T  G+F+D++LL++ +   N+       IH+D ASG    PF+ PEL WDFRL  V SIN SGHKYGLVY G+GW++W++KE
Sbjct:  100 RCVNILADLWNAPKDMSY--LGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPMDKNHLSLDVDKVFDLVDEYTIGVVGILGITYTGKFDDIQLLDEKVEAYNETNEHQLVIHIDGASGAMFTPFVNPELPWDFRLKNVVSINTSGHKYGLVYPGVGWILWKDKE 295          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: DCE_YEAST (Glutamate decarboxylase OS=Saccharomyces cerevisiae GN=GAD1 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.340e-44
Identity = 91/208 (43.75%), Postives = 126/208 (60.58%), Query Frame = 1
Query:    4 RVRNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAE-KNKETGW---DTPIHVDAASGGFIAPF--------LYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNK 588
            R  +++A+L++A     E  +G  T GSSEAIML GLA K++W+++ K  GK   KPNI+  +  QV  EKF RYFEVE + V +S   ++++DP    + VDENTI    ILG+T  G  E+V+ + D+L++ + K   W   D PIH D ASGGFI PF         Y    W F  P V S+N SGHK+GL   G+GWV+WR++
Sbjct:  129 RCISMLAQLWHA--NPDEEPIGCATTGSSEAIMLGGLAMKKRWEHRMKNAGKDASKPNIIMSSACQVALEKFTRYFEVECRLVPVSHRSHHMLDPESLWDYVDENTIGCFVILGTTYTGHLENVEKVADVLSQIEAKHPDWSNTDIPIHADGASGGFIIPFGFEKEHMKAYGMERWGFNHPRVVSMNTSGHKFGLTTPGLGWVLWRDE 334          

HSP 2 Score: 34.6538 bits (78), Expect = 8.340e-44
Identity = 16/40 (40.00%), Postives = 24/40 (60.00%), Query Frame = 3
Query:  594 LPEELIFHIXYLGADQPTFTPHFSKGSSQVIAQYYKLIXL 713
            L +EL F + YLG  + TF  +FS+   QV+ QY+  + L
Sbjct:  337 LADELRFKLKYLGGVEETFGLNFSRPGFQVVHQYFNFVSL 376          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: SGPL_YEAST (Sphingosine-1-phosphate lyase OS=Saccharomyces cerevisiae GN=DPL1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.158e-16
Identity = 62/200 (31.00%), Postives = 103/200 (51.50%), Query Frame = 1
Query:    7 VRNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL----YPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            V +++ R+FNAP   S+T  G  T G +E+++LA L+ K    + R        +P I+        ++K A YF ++L+ V+L    Y +D  K  + +++NTI +     +  +G  +D++ L  + A+K K      P+HVD+  G FI  F+    Y  L   DFR+P V SI+   HKYG    G   +++RN +
Sbjct:  212 VVSMVLRMFNAP---SDTGCGTTTSGGTESLLLACLSAKMYALHHRG-----ITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNTILLVGSAPNFPHGIADDIEGLGKI-AQKYK-----LPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSD 397          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_METTP (L-tyrosine decarboxylase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=mfnA PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.892e-15
Identity = 46/148 (31.08%), Postives = 77/148 (52.03%), Query Frame = 1
Query:  175 NIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKETCLKNSSST 618
            NIV   +    ++K A    +E+++ +L E   V D      ++D+ T+C+  I G+T  G+ + +  L++L  E         P+HVDAA GGF+ PFL  +  WDFR   V+SI +  HK G+     G +I+R+ +   +  + T
Sbjct:  113 NIVVPRSAHFSFDKIADLLNLEVRKAELDESLRV-DVGDVERLIDDRTVCLVGIAGTTEFGQVDPIGDLSELAIENG------IPLHVDAAFGGFVLPFLEKDCMWDFRAEGVQSITIDPHKMGMSPIPAGGLIFRSSDPLRRLETET 253          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_METLZ (L-tyrosine decarboxylase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=mfnA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.161e-14
Identity = 61/177 (34.46%), Postives = 86/177 (48.59%), Query Frame = 1
Query:   61 AVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            A   GT  + +AI +A          K K E K    PNIV  A+    ++K      +E++ V   + Y V D  K  EMVD+NTI V+AI G+T  G  +DV+ +  +  E       D   HVDAA GG + PFL     +DF +P V SI++  HK G+     G ++ R  E
Sbjct:   85 ATSGGTESNLQAIRIA---------KKLKPEIK---NPNIVVPASAHFSFDKTCDILGLEMRTVPYGKNYTV-DCDKMAEMVDKNTISVSAIAGTTEYGMIDDVERIAKIALEN------DLFFHVDAAFGGMVIPFLPNPAPFDFEVPGVSSISLDPHKMGMSTIPCGCLLLREPE 242          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_ARCFU (L-tyrosine decarboxylase OS=Archaeoglobus fulgidus GN=mfnA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 55/178 (30.90%), Postives = 85/178 (47.75%), Query Frame = 1
Query:   55 ETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNK 588
            ET  G    G +EA  + G+   R  Q K        + PNIV        +EK      V++K   + E Y V D  +  +++DENT+ +  I G+T  G+ + +  L+ L  E+  E      +HVDAA GG + PF+     +DF+   V SI +  HK G+     G +I+RN+
Sbjct:   71 ETPAGYICSGGTEA-NIQGIRAARNVQKK--------ENPNIVIPKTAHFSFEKIGDILGVKIKRAGVDEEYKV-DVGQVEDLMDENTVAIVGIAGTTELGQIDPIVELSKLAEERQVE------LHVDAAFGGLVIPFMDNPYPFDFQNRGVSSITIDPHKMGMATIPAGGIIFRNE 232          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_METKA (L-tyrosine decarboxylase OS=Methanopyrus kandleri GN=mfnA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.284e-13
Identity = 57/182 (31.32%), Postives = 85/182 (46.70%), Query Frame = 1
Query:   55 ETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL---YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            E A G    G +EA +LA  A +     +            I+  A     +EK AR   ++L E  L   Y V D     +++  +T  +  I+G+T  G  +D++ L+D+  +         P+HVDAA GGF APFL   YP   + F L  V S+ V  HK GLV    G +++R+ E
Sbjct:   69 EEAEGSIVSGGTEANILAAYAAREVTGGRE-----------IIVPATRHFSFEKAARMLRMKLVEAPLRSDYTV-DVDAVQDLISRDTALIVGIVGTTETGSVDDIEALSDVAEDHG------VPLHVDAAFGGFTAPFLREEYPLPRFGFDLEAVVSVTVDPHKMGLVPPPAGGIVFRDDE 232          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_UNCMA (L-tyrosine decarboxylase OS=Uncultured methanogenic archaeon RC-I GN=mfnA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.677e-13
Identity = 48/173 (27.75%), Postives = 87/173 (50.29%), Query Frame = 1
Query:   70 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNK 588
            + T G+   I     A + K  ++R+A        NIV   +    +EK ++   + ++   L +     DP +   ++D+NTI + A+ G+T  G+ + ++ +  L  E       D  +HVDAA GGF+ PF+    ++DF +P V+SI +  HK GL     G +++R++
Sbjct:   85 ISTGGTESNIQALRTAIQMKHTDRRRA--------NIVVPESAHYSFEKASQMLGIAIRRAPLDD-LLRADPSEMAALIDKNTIALVAVAGTTEFGQIDPIEEIGRLAQEH------DLYLHVDAAFGGFVIPFMDRPAKFDFEIPGVQSITIDPHKMGLSTIPSGGLLYRSE 242          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_METHJ (L-tyrosine decarboxylase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=mfnA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.190e-13
Identity = 54/171 (31.58%), Postives = 85/171 (49.71%), Query Frame = 1
Query:   37 APLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL 549
            A L    +A G  T G +E+ +   L F +K +N ++        PNI+  A+    +EK     ++E++ V + E Y  M    A E++D+NT C+  + G+T  G  + +  L  L  ++         +HVDAA GG++ PFL     +DF +P V SI V  HK GL
Sbjct:   73 ADLYHEPSAGGCTTSGGTESNIQV-LRFCKKTKNVKE--------PNIIVPASAHFSFEKACGMMDIEMRVVPVDEQYR-MKTDAAGELIDKNTCCIVGVAGTTEYGMTDPIPALGKLAEQEGVH------LHVDAAFGGYVLPFLDDAPPFDFSVPGVGSIAVDPHKMGL 227          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_METB6 (L-tyrosine decarboxylase OS=Methanoregula boonei (strain 6A8) GN=mfnA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.736e-13
Identity = 45/145 (31.03%), Postives = 75/145 (51.72%), Query Frame = 1
Query:  157 KPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            +P   PN+V   +V   ++K      +E++ V L     +M   KA E++D+NTIC+  + G+T  G  + +  L  + A++      D  +HVDAA GG + PFL   + +DF LP V ++ V  HK G+     G ++ R  +
Sbjct:  104 RPGSSPNVVLPESVHFSFKKACDLLSLEMRSVPLGTDRRIMAD-KAAELIDKNTICLVGVAGTTEYGMVDPIADLAKIAAQQ------DIFLHVDAAFGGMVIPFLPKPVPFDFALPGVTTLAVDPHKMGMSTIPAGVLLTREPD 241          
The following BLAST results are available for this feature:
BLAST of EY659096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
DCEC_LISMO3.348e-4645.96Probable glutamate decarboxylase gamma OS=Listeria... [more]
DCE_YEAST8.340e-4443.75Glutamate decarboxylase OS=Saccharomyces cerevisia... [more]
SGPL_YEAST6.158e-1631.00Sphingosine-1-phosphate lyase OS=Saccharomyces cer... [more]
MFNA_METTP8.892e-1531.08L-tyrosine decarboxylase OS=Methanosaeta thermophi... [more]
MFNA_METLZ1.161e-1434.46L-tyrosine decarboxylase OS=Methanocorpusculum lab... [more]
MFNA_ARCFU5.764e-1430.90L-tyrosine decarboxylase OS=Archaeoglobus fulgidus... [more]
MFNA_METKA1.284e-1331.32L-tyrosine decarboxylase OS=Methanopyrus kandleri ... [more]
MFNA_UNCMA1.677e-1327.75L-tyrosine decarboxylase OS=Uncultured methanogeni... [more]
MFNA_METHJ2.190e-1331.58L-tyrosine decarboxylase OS=Methanospirillum hunga... [more]
MFNA_METB63.736e-1331.03L-tyrosine decarboxylase OS=Methanoregula boonei (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659096 ID=EY659096; Name=EY659096; organism=Citrus sinensis; type=EST; length=928bp
CCACGCGTCCGGAACATCATTGCCCGACTGTTCAATGCTCCACTGGAGGA
CTCCGAGACGGCTGTCGGAGTTGGAACCGTAGGATCATCGGAAGCCATAA
TGTTGGCCGGCCTTGCATTCAAAAGAAAGTGGCAGAACAAGCGCAAGGCT
GAAGGAAAGCCCTTTGACAAACCCAACATTGTCACTGGAGCGAACGTTCA
GGTCTGCTGGGAGAAATTTGCAAGGTATTTTGAGGTAGAGTTGAAGGAAG
TGAAGCTGTCGGAAGGCTACTATGTGATGGACCCAGTCAAAGCTGTAGAA
ATGGTGGATGAAAACACTATCTGTGTTGCTGCTATTCTGGGTTCTACTCT
TAATGGAGAATTTGAAGATGTCAAGCTCTTGAACGACCTTTTGGCAGAGA
AGAACAAGGAAACAGGATGGGATACTCCAATTCATGTTGATGCTGCAAGT
GGTGGCTTCATTGCACCATTTTTGTACCCAGAGCTTGAATGGGACTTCCG
CTTGCCGCTGGTGAAGAGTATTAATGTTAGTGGCCACAAGTACGGGCTTG
TGTATGCTGGTATTGGTTGGGTTATTTGGAGAAACAAAGAGACTTGCCTG
AAGAACTCATCTTCCACATCANTTACCTAGGAGCTGATCAACCCACCTTC
ACCCCTCATTTCTCTAAAGGNTCTAGCCAAGTAATTGCTCAGTACTACAA
ACTAATCCNGCTTANNGTTTGAGGGATACCCGCATGTGATGGAGAATTGT
CACGAAAATGCATGGNGCTGAAAGAAGGACTAAAGAAACTGGCCGCTCAA
CATTGTGTCAAGGCACCAAGGGGTTCCGNTGGGGGCATTTCTCTCAGGAA
CACAACGCACGATGAATCAAAGGGCCGATTGCTGCCCGTTTTTGTTGATT
GTGCAGGTAAACATGGCCGTGACGTCAG
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