EY659096

Overview
NameEY659096
Unique NameEY659096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_THEGJ (L-tyrosine decarboxylase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=mfnA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.879e-13
Identity = 59/175 (33.71%), Postives = 89/175 (50.86%), Query Frame = 1
Query:   82 GSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVE-MVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            G +EA +LA  AF       R   G   +KP ++   +    + K      V+L   +L+E Y V   V+ VE  + +NTI +  I G+T  G  +D+  L+DL  +      +  P+HVDAA GGF+ PF     Y   ++DFRL  VKSI +  HK G+V    G +I+R ++
Sbjct:   91 GGTEANILAVRAF-------RNLAG--VEKPELILPKSAHFSFIKAGEMLGVKLIWAELNEDYTVN--VRDVEEKITDNTIGIVGIAGTTGLGVVDDIPALSDLALD------YGLPLHVDAAFGGFVIPFAKALGYDIPDFDFRLKGVKSITIDPHKMGMVPIPAGGIIFRERK 248          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_METTH (L-tyrosine decarboxylase OS=Methanobacterium thermoautotrophicum GN=mfnA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.879e-13
Identity = 58/179 (32.40%), Postives = 90/179 (50.28%), Query Frame = 1
Query:   61 AVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLY---PEL-EWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRN 585
            A G    G +EA ++A     R  +N   AE     KP I+   +    + K A    + L+E +L + Y V D     +++ ENT+ V  + G+T  G  + V+ L+++  ++      D  +H+DAA GGFI PFL     EL E+DF+L  V SI V  HK GL     G +++R+
Sbjct:   61 AAGHIITGGTEANLMA----MRAARNMAGAE-----KPEIIVPKSAHFSFRKAADILGLRLREAELDQDYRV-DVESVRKLISENTVAVVGVAGTTELGRIDPVEELSEICLDE------DIHLHIDAAFGGFIIPFLRETGAELPEFDFKLQGVSSITVDPHKMGLAPIPSGCILFRD 223          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_PYRKO (L-tyrosine decarboxylase OS=Pyrococcus kodakaraensis GN=mfnA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.323e-13
Identity = 51/147 (34.69%), Postives = 78/147 (53.06%), Query Frame = 1
Query:  166 DKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEM-VDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            +KP ++   +    + K A    V+L   +L++ Y V   VK VE  + + TI +  I G+T  G  +D+  L+DL  +      +  P+HVDAA GGF+ PF     Y   ++DFRL  VKSI +  HK G+V    G +I+R K+
Sbjct:  110 EKPELILPESAHFSFIKAAEMLGVKLVWAELNDDYTVN--VKDVEKKITDRTIGIVGIAGTTGLGVVDDIPALSDLALD------YGLPLHVDAAFGGFVIPFAKALGYEIPDFDFRLKGVKSITIDPHKMGMVPIPAGGIIFREKK 248          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_METS3 (L-tyrosine decarboxylase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=mfnA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.323e-13
Identity = 62/200 (31.00%), Postives = 95/200 (47.50%), Query Frame = 1
Query:    7 VRNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYV-MDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            + N + +     L  SE    + T G+   IM    A +    + RK +G    +  I+   +    ++K A    +++ E KL E Y + +D VK  E + +NT+ + AI G+T  G  + ++ L+++  E N         HVDAA GGF  PFL    Y    +DF LP V SI V  HK GL     G +++R KE
Sbjct:   66 IENEVIKSIGELLSISEPYGNIVTGGTEANIM----AMRAARNHARKYKG--IKEGEIIIPDSAHFSFKKAADMMNLKIIEAKLDENYKIDVDSVK--ENISDNTVAIVAIAGTTELGLVDPIEELSEIAYENN------IYFHVDAAFGGFSIPFLRKIGYEFPPFDFSLPGVCSITVDPHKMGLAPIPAGGILFRKKE 251          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_METAC (L-tyrosine decarboxylase OS=Methanosarcina acetivorans GN=mfnA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.323e-13
Identity = 58/201 (28.86%), Postives = 95/201 (47.26%), Query Frame = 1
Query:    7 VRNIIARLFNAPLED-------SETAVGVGTVGSSEAIMLAGLAFKRK-WQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRN 585
            V  ++  L +AP  D         +A G  T G +E+ + A    K      K++ +G P    NIV   +    ++K A    +E++   L   + V D      ++D NTI +  I G+T  G+ + +  L+++  E       +  +H+DAA GGF+ PFL     +DF+LP V SI V  HK GL     G +++R+
Sbjct:   68 VVGMLGELLHAPSIDVPFGGSCESSACGYLTTGGTESNIQAVRGMKNLVTTGKKELKGAP----NIVIPESAHFSFDKVADMMGIEVRRASLDSEFRV-DMASIESLIDANTIGLIGIAGNTEFGQIDPIDKLSEIALEN------ELFLHIDAAFGGFVIPFLEKPQPFDFKLPGVTSIAVDPHKMGLSTIPSGALLFRS 257          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_METMA (L-tyrosine decarboxylase OS=Methanosarcina mazei GN=mfnA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.087e-12
Identity = 54/174 (31.03%), Postives = 88/174 (50.57%), Query Frame = 1
Query:   67 GVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD-KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRN 585
            G  T G +E+ + A     R  +N   A  K F   PNIV  A+    ++K A    +E++   L   + V D     ++++ENTI +  I G+T  G+ + +  L+++  E       +  +HVDAA GGF+ PFL     +DF++P V SI +  HK GL     G +++R+
Sbjct:   95 GYLTTGGTESNIQA----VRGMKNLVTAGKKEFKGTPNIVIPASAHFSFDKVADMMGIEVRRASLDSEFRV-DMASVEKLINENTIGLVGIAGNTEFGQIDPIDKLSEVALEN------ELFLHVDAAFGGFVIPFLEKPQPFDFKVPGVTSIAIDPHKMGLSTIPSGALLFRS 257          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_PYRAB (L-tyrosine decarboxylase OS=Pyrococcus abyssi GN=mfnA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12
Identity = 58/175 (33.14%), Postives = 88/175 (50.29%), Query Frame = 1
Query:   82 GSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEM-VDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            G +EA +LA  AF+    N   AE     +P ++   +    + K      V+L   +L + Y V   VK VE  + +NTI +  I G+T  G  +D+  L+DL  E      +  P+HVDAA GGF+ PF     Y   ++DF+L  V+SI +  HK G+     G +I+R K+
Sbjct:   93 GGTEANILAVRAFR----NISDAE-----RPELILPKSAHFSFIKAGEMLGVKLVWAELKQDYAV--DVKDVEAKISDNTIGIVGIAGTTGLGVVDDIPALSDLARE------YGIPLHVDAAFGGFVIPFAKSLGYDLPDFDFKLKGVESITIDPHKMGMAPIPAGGIIFRRKK 250          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_METBF (L-tyrosine decarboxylase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=mfnA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12
Identity = 56/181 (30.94%), Postives = 88/181 (48.62%), Query Frame = 1
Query:   46 EDSETAV-GVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRN 585
            E  E++V G  T G +E+ + A    K       K  G+     NIV   +    ++K A    +E+K   L   + V D   A  ++D NTI +  I G+T  G+ + ++ L+ L  E       +  +HVDAA GGF+ PFL     +DF++P V SI +  HK GL     G +++R+
Sbjct:   87 EACESSVCGYLTTGGTESNIQAIRGMKNLVTEDGKKSGEIL---NIVVPESAHFSFDKVANMMGIEVKRASLDPEFRV-DIASAESLIDANTIGLVGIAGNTEFGQVDPIEELSKLALEN------ELFLHVDAAFGGFVIPFLEKPYSFDFKVPGVTSIAIDPHKMGLSTIPSGALLFRS 257          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_METMJ (L-tyrosine decarboxylase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=mfnA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.422e-12
Identity = 46/151 (30.46%), Postives = 80/151 (52.98%), Query Frame = 1
Query:  157 KPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVE-MVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE--TCL 600
            K    PN+V  A+    + K      +E++ V L  G+ +    +AV+ ++D NT+ +  ++G+T  G  + +  L+++  ++N        +HVDAA GG + PFL   + +DF LP V SI+V  HK G+     G ++ R+ E  +CL
Sbjct:  104 KSAKSPNVVVPASSHFSFTKACDILGLEMRTVPLDAGFRM--ETEAVDGLIDHNTVALVGVVGTTEYGMVDPISRLSEIALDRN------VFLHVDAAFGGMVVPFLDRPVPFDFSLPGVSSISVDPHKMGMSTIPAGCLLTRSAEWFSCL 246          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: SGPL_DICDI (Sphingosine-1-phosphate lyase OS=Dictyostelium discoideum GN=sglA PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.395e-12
Identity = 53/199 (26.63%), Postives = 99/199 (49.75%), Query Frame = 1
Query:   13 NIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDL--LAEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            ++++ + NA        VG  T G +E+I +A  A++  ++++        D+P IV    +   ++K   Y ++ +  + +    Y +D     + ++++TI VA   GS +N     +  ++++  LA++     +D   HVDA  GGFI PF     Y    +DFR+P V S++V  HK+G    G   V++ NK+
Sbjct:  162 SMVSNMLNA----HSKVVGSLTSGGTESIFMAVKAYRDFYKDRT-------DRPEIVVPVTIHAAFDKACEYLKIRIVHIDVDPVSYKVDMAAMKKAINKDTILVA---GSAVNFPHGIIDPIDEIAKLAQQ-----YDIGCHVDACLGGFILPFAEKLDYDIPVFDFRIPGVTSMSVDTHKFGYAAKGTSVVLFGNKK 341          
The following BLAST results are available for this feature:
BLAST of EY659096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
MFNA_THEGJ4.879e-1333.71L-tyrosine decarboxylase OS=Thermococcus gammatole... [more]
MFNA_METTH4.879e-1332.40L-tyrosine decarboxylase OS=Methanobacterium therm... [more]
MFNA_PYRKO8.323e-1334.69L-tyrosine decarboxylase OS=Pyrococcus kodakaraens... [more]
MFNA_METS38.323e-1331.00L-tyrosine decarboxylase OS=Methanobrevibacter smi... [more]
MFNA_METAC8.323e-1328.86L-tyrosine decarboxylase OS=Methanosarcina acetivo... [more]
MFNA_METMA1.087e-1231.03L-tyrosine decarboxylase OS=Methanosarcina mazei G... [more]
MFNA_PYRAB1.420e-1233.14L-tyrosine decarboxylase OS=Pyrococcus abyssi GN=m... [more]
MFNA_METBF1.420e-1230.94L-tyrosine decarboxylase OS=Methanosarcina barkeri... [more]
MFNA_METMJ2.422e-1230.46L-tyrosine decarboxylase OS=Methanoculleus marisni... [more]
SGPL_DICDI5.395e-1226.63Sphingosine-1-phosphate lyase OS=Dictyostelium dis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659096 ID=EY659096; Name=EY659096; organism=Citrus sinensis; type=EST; length=928bp
CCACGCGTCCGGAACATCATTGCCCGACTGTTCAATGCTCCACTGGAGGA
CTCCGAGACGGCTGTCGGAGTTGGAACCGTAGGATCATCGGAAGCCATAA
TGTTGGCCGGCCTTGCATTCAAAAGAAAGTGGCAGAACAAGCGCAAGGCT
GAAGGAAAGCCCTTTGACAAACCCAACATTGTCACTGGAGCGAACGTTCA
GGTCTGCTGGGAGAAATTTGCAAGGTATTTTGAGGTAGAGTTGAAGGAAG
TGAAGCTGTCGGAAGGCTACTATGTGATGGACCCAGTCAAAGCTGTAGAA
ATGGTGGATGAAAACACTATCTGTGTTGCTGCTATTCTGGGTTCTACTCT
TAATGGAGAATTTGAAGATGTCAAGCTCTTGAACGACCTTTTGGCAGAGA
AGAACAAGGAAACAGGATGGGATACTCCAATTCATGTTGATGCTGCAAGT
GGTGGCTTCATTGCACCATTTTTGTACCCAGAGCTTGAATGGGACTTCCG
CTTGCCGCTGGTGAAGAGTATTAATGTTAGTGGCCACAAGTACGGGCTTG
TGTATGCTGGTATTGGTTGGGTTATTTGGAGAAACAAAGAGACTTGCCTG
AAGAACTCATCTTCCACATCANTTACCTAGGAGCTGATCAACCCACCTTC
ACCCCTCATTTCTCTAAAGGNTCTAGCCAAGTAATTGCTCAGTACTACAA
ACTAATCCNGCTTANNGTTTGAGGGATACCCGCATGTGATGGAGAATTGT
CACGAAAATGCATGGNGCTGAAAGAAGGACTAAAGAAACTGGCCGCTCAA
CATTGTGTCAAGGCACCAAGGGGTTCCGNTGGGGGCATTTCTCTCAGGAA
CACAACGCACGATGAATCAAAGGGCCGATTGCTGCCCGTTTTTGTTGATT
GTGCAGGTAAACATGGCCGTGACGTCAG
back to top