EY659096

Overview
NameEY659096
Unique NameEY659096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_PYRHO (L-tyrosine decarboxylase OS=Pyrococcus horikoshii GN=mfnA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.202e-12
Identity = 53/175 (30.29%), Postives = 86/175 (49.14%), Query Frame = 1
Query:   82 GSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEM-VDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            G +EA +LA  AF+              +KP ++   +    + K      V+L   +L+  Y V   V+ VE  + +NTI +  I G+T  G  +D+  L+DL  +      +  P+HVDAA GGF+ PF     Y   ++DF+L  V+SI +  HK G+     G +++R K+
Sbjct:   92 GGTEANILAVRAFRNL---------SDVEKPELILPKSAHFSFIKAGEMLGVKLVWAELNPDYTV--DVRDVEAKISDNTIGIVGIAGTTGLGVVDDIPALSDLARD------YGIPLHVDAAFGGFVIPFAKELGYELPDFDFKLKGVQSITIDPHKMGMAPIPAGGIVFRRKK 249          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: SGPL_DROME (Sphingosine-1-phosphate lyase OS=Drosophila melanogaster GN=Sply PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11
Identity = 47/184 (25.54%), Postives = 85/184 (46.20%), Query Frame = 1
Query:   52 SETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            +  + G  T G +E+I++A  A++         E K   +PNIV    V   ++K  +YF + ++ V +    Y +D  K    ++ NTI +     +   G  +D++ +  L  +      +D P+HVDA  G F+   +    Y    +DF +  V SI+   HKYG    G   +++ +K+
Sbjct:  187 NSASCGTMTTGGTESIVMAMKAYR-----DFAREYKGITRPNIVVPKTVHAAFDKGGQYFNIHVRSVDVDPETYEVDIKKFKRAINRNTILLVGSAPNFPYGTIDDIEAIAALGVK------YDIPVHVDACLGSFVVALVRNAGYKLRPFDFEVKGVTSISADTHKYGFAPKGSSVILYSDKK 359          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_PYRFU (L-tyrosine decarboxylase OS=Pyrococcus furiosus GN=mfnA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.570e-11
Identity = 54/175 (30.86%), Postives = 85/175 (48.57%), Query Frame = 1
Query:   82 GSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEM-VDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            G +EA +LA  AF+              + P ++   +    + K      V+L    L+  Y V   VK VE  + ENTI +  I G+T  G  +D+  L+DL  +      +  P+HVDAA GGF+ PF     Y   ++DF+L  V+SI +  HK G+     G +++R+K+
Sbjct:   92 GGTEANILAVRAFRNL---------ADVENPELILPKSAHFSFIKAGEMLGVKLIWADLNPDYTV--DVKDVEAKISENTIGIVGIAGTTGLGVVDDIPALSDLARD------YGIPLHVDAAFGGFVIPFAKELGYDLPDFDFKLKGVQSITIDPHKMGMAPIPAGGIVFRHKK 249          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_METPE (L-tyrosine decarboxylase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=mfnA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.965e-11
Identity = 46/145 (31.72%), Postives = 68/145 (46.90%), Query Frame = 1
Query:  157 KPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            K  DKPN+V        ++K      +++K V         D  +  + +D+NTI +  I GST  G  +D+  L  +  E+      D  +HVDAA GG + PFL     +DF LP V SI V  HK G+     G ++ R  +
Sbjct:  104 KKVDKPNVVIPETSHFSFKKACDILGIQMKTVPADRSMRT-DISEVSDAIDKNTIALVGIAGSTEYGMVDDIGALATIAEEE------DLYLHVDAAFGGLVIPFLPNPPAFDFALPGVSSIAVDPHKMGMSTLPAGALLVREPQ 241          
BLAST of EY659096 vs. ExPASy Swiss-Prot
Match: MFNA_METBU (L-tyrosine decarboxylase OS=Methanococcoides burtonii (strain DSM 6242) GN=mfnA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11
Identity = 42/142 (29.58%), Postives = 76/142 (53.52%), Query Frame = 1
Query:  169 KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYV-MDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 591
            +PNIV   +    ++K A    +E+++  L +   V +D V++  ++D+NTI +  I G+T  G+ + +  L+ +  EK         +H+DAA GGF+ PF+  +  +DFRL  V S+ +  HK  L     G ++++  E
Sbjct:  112 RPNIVMPESAHFSFDKVANLSGIEIRKASLDKLLKVDLDSVRS--LIDKNTIGLVGIAGTTEFGQLDPINELSKIAIEKG------IFLHIDAAFGGFVIPFMDIDYTYDFRLEGVTSMTIDPHKMALSTIPSGGLLFKEPE 245          
The following BLAST results are available for this feature:
BLAST of EY659096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
MFNA_PYRHO9.202e-1230.29L-tyrosine decarboxylase OS=Pyrococcus horikoshii ... [more]
SGPL_DROME1.202e-1125.54Sphingosine-1-phosphate lyase OS=Drosophila melano... [more]
MFNA_PYRFU1.570e-1130.86L-tyrosine decarboxylase OS=Pyrococcus furiosus GN... [more]
MFNA_METPE5.965e-1131.72L-tyrosine decarboxylase OS=Methanosphaerula palus... [more]
MFNA_METBU7.790e-1129.58L-tyrosine decarboxylase OS=Methanococcoides burto... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659096 ID=EY659096; Name=EY659096; organism=Citrus sinensis; type=EST; length=928bp
CCACGCGTCCGGAACATCATTGCCCGACTGTTCAATGCTCCACTGGAGGA
CTCCGAGACGGCTGTCGGAGTTGGAACCGTAGGATCATCGGAAGCCATAA
TGTTGGCCGGCCTTGCATTCAAAAGAAAGTGGCAGAACAAGCGCAAGGCT
GAAGGAAAGCCCTTTGACAAACCCAACATTGTCACTGGAGCGAACGTTCA
GGTCTGCTGGGAGAAATTTGCAAGGTATTTTGAGGTAGAGTTGAAGGAAG
TGAAGCTGTCGGAAGGCTACTATGTGATGGACCCAGTCAAAGCTGTAGAA
ATGGTGGATGAAAACACTATCTGTGTTGCTGCTATTCTGGGTTCTACTCT
TAATGGAGAATTTGAAGATGTCAAGCTCTTGAACGACCTTTTGGCAGAGA
AGAACAAGGAAACAGGATGGGATACTCCAATTCATGTTGATGCTGCAAGT
GGTGGCTTCATTGCACCATTTTTGTACCCAGAGCTTGAATGGGACTTCCG
CTTGCCGCTGGTGAAGAGTATTAATGTTAGTGGCCACAAGTACGGGCTTG
TGTATGCTGGTATTGGTTGGGTTATTTGGAGAAACAAAGAGACTTGCCTG
AAGAACTCATCTTCCACATCANTTACCTAGGAGCTGATCAACCCACCTTC
ACCCCTCATTTCTCTAAAGGNTCTAGCCAAGTAATTGCTCAGTACTACAA
ACTAATCCNGCTTANNGTTTGAGGGATACCCGCATGTGATGGAGAATTGT
CACGAAAATGCATGGNGCTGAAAGAAGGACTAAAGAAACTGGCCGCTCAA
CATTGTGTCAAGGCACCAAGGGGTTCCGNTGGGGGCATTTCTCTCAGGAA
CACAACGCACGATGAATCAAAGGGCCGATTGCTGCCCGTTTTTGTTGATT
GTGCAGGTAAACATGGCCGTGACGTCAG
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