EY659083

Overview
NameEY659083
Unique NameEY659083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3548 contig Csv1_Contig3548:386..1268. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659083 vs. ExPASy Swiss-Prot
Match: GUN12_ORYSJ (Endoglucanase 12 OS=Oryza sativa subsp. japonica GN=GLU3 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 9.400e-34
Identity = 83/196 (42.35%), Postives = 107/196 (54.59%), Query Frame = 2
Query:   29 LVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDY----FIKAHPQPNVLYGEVGDGN------TDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETXXXXXXXSIVFRHSDPAYSSELLRHAYQLFDFA--DKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNST 580
            LVGGYYDAGDN+KF  P+AF++TM+SWS+IEY  +  A GE  H    IKWGTDY    F  +    + +Y +VG          DH CW RPEDM   R    +  +    DL GE        SIVFR  + AYS +L+  A  ++ FA     R  Y       + YY S S Y DE +W+AAW+Y A+GN+T
Sbjct:  157 LVGGYYDAGDNIKFHFPLAFSMTMLSWSVIEYSAKYKAVGEYDHVRELIKWGTDYLLLTFNSSASTIDKVYSQVGIAKINGTQPDDHYCWNRPEDMAYPR---PVQTAGSAPDLGGEMAAALAAASIVFR-DNAAYSKKLVNGAAAVYKFARSSGRRTPYSRGNQYIEYYYNSTS-YWDEYMWSAAWMYYATGNNT 347          

HSP 2 Score: 22.3274 bits (46), Expect = 9.400e-34
Identity = 8/19 (42.11%), Postives = 11/19 (57.89%), Query Frame = 1
Query:  643 FGWDVKXPGXQTLXAKFLM 699
            F WD K PG + L ++  M
Sbjct:  373 FSWDNKLPGAELLLSRLRM 391          
BLAST of EY659083 vs. ExPASy Swiss-Prot
Match: GUN7_ARATH (Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.643e-32
Identity = 81/196 (41.33%), Postives = 107/196 (54.59%), Query Frame = 2
Query:   29 LVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDY----FIKAHPQPNVLYGEVGDGNTDHN------CWQRPEDMTTDRRAYKIDPSNPGSDLAGETXXXXXXXSIVFRHSDPAYSSELLRHAYQLFDF--ADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNST 580
            LVGGYYD G NVKF  PMAF++TM+SWS+IEY  +  A  E  H  + +KWGTDY    F  +  + + +Y +VG G  D        CWQ+PEDM+ DR    +  S   +DL  E        SIVF    P Y+ +L + A  L+ F  +   R +Y      AQ +Y S S + DE +WA AWLY A+GN T
Sbjct:  161 LVGGYYDGGSNVKFHFPMAFSMTMLSWSLIEYSHKYKAIDEYDHMRDVLKWGTDYLLLTFNNSATRLDHIYTQVGGGLRDSESPDDIYCWQKPEDMSYDR---PVLSSTSAADLGAEVSAALAAASIVFT-DKPDYAKKLKKGAETLYPFFRSKSRRKRYSDGQPTAQAFYNSTSMF-DEFMWAGAWLYYATGNKT 351          
BLAST of EY659083 vs. ExPASy Swiss-Prot
Match: GUNX_PRUPE (Endoglucanase CX (Fragment) OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.331e-24
Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 2
Query:  275 PEDMTTDRRAYKIDPSNPGSDLAGETXXXXXXXSIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSI-TVAQKYYRSISGYNDELLWAAAWLYQASGN 574
            PEDM T R  YK+   NPGSD+A ET       SIVF+ SDP+YS +LL  A ++FDFAD+YRG Y  SI +V   +Y S SG++DELLW A+W+++AS N
Sbjct:    1 PEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASIVFKDSDPSYSGKLLHTAMKVFDFADRYRGSYSDSIGSVVCPFYCSYSGHHDELLWGASWIHRASQN 101          
The following BLAST results are available for this feature:
BLAST of EY659083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GUN12_ORYSJ9.400e-3442.35Endoglucanase 12 OS=Oryza sativa subsp. japonica G... [more]
GUN7_ARATH5.643e-3241.33Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE... [more]
GUNX_PRUPE4.331e-2453.47Endoglucanase CX (Fragment) OS=Prunus persica PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-C01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659083 ID=EY659083; Name=EY659083; organism=Citrus sinensis; type=EST; length=879bp
CCACGCGTCCGAAGCCAGTGGGGTGGATCTTGTAGGAGGATACTATGACG
CAGGGGACAATGTGAAATTTGGATTGCCAATGGCATTCACCGTGACAATG
ATGTCTTGGAGCATAATTGAATATGGAAAGCAGATGGCTGCAAGTGGAGA
GCTTGGCCATGCCATGAATGCTATTAAGTGGGGCACTGATTACTTCATTA
AAGCTCACCCTCAGCCTAATGTCCTCTATGGAGAGGTGGGAGATGGAAAC
ACTGACCATAACTGCTGGCAAAGGCCGGAGGATATGACTACTGACAGGCG
GGCTTACAAGATTGATCCGAGTAACCCCGGGTCGGATCTTGCCGGTGAAA
CCGCCGCCGCCATGGCTGCCGCCTCCATCGTTTTCCGCCACTCTGACCCT
GCTTACTCCAGTGAGCTACTCCGCCACGCTTACCAGCTCTTTGATTTCGC
CGACAAATACAGAGGAAAATATGACGGCAGTATCACTGTGGCACAAAAAT
ACTACCGTTCTATCAGTGGCTACAATGATGAGTTGCTTTGGGCTGCTGCG
TGGTTGTATCAAGCAAGTGGCAACAGCACTACTTGGACTACCTTGGAAAA
AATGGTGACTCCATGGGAAGAACTGGCTGGGGAATGACTNGATTTGGATG
GGATGTGAAGNATCCGGGGGNTCAAACACTTGNTGCCAAGTTCTTGATGC
AAAGCAAAGCTGGAACTATGCCCCAGTCTTTGAGAGGTACAACAGAAGCA
GAATACTTTATGTGTTCTTGCCTGGGAAAAGGCTCCCGGATGTTCAAAAA
ACACCTGNTGGCCTAATCTTCCGCCAAGATGNAACACATGCANTTCGGGA
CCANGCTTTCTTTCTGGCACGCGCTATCT
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