EY659064

Overview
NameEY659064
Unique NameEY659064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length950
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7452 contig Csv1_Contig7452:1..956. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_BOVIN (Calreticulin OS=Bos taurus GN=CALR PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 9.802e-33
Identity = 59/115 (51.30%), Postives = 83/115 (72.17%), Query Frame = 2
Query:   20 KPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEE 364
            KPE +D  P+ IPDP AKKP++WDE+ DG W+PP I NP YKG W+P++I NP YKG W  P IDNPE+  D ++Y  +    +G+++WQVK+G+++DN LI +D AYA++   E
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPEYKGIWIHPEIDNPEYSPDSNIYAYENFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNE 345          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_BOMMO (Calreticulin OS=Bombyx mori GN=crt PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.864e-32
Identity = 61/111 (54.95%), Postives = 80/111 (72.07%), Query Frame = 2
Query:   20 KPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQ 352
            KPE +D  P+ IPDP A KP++WD++ DG W+PP I NP YKG W PK+I NP YKG W  P IDNPE+  D +LY    I  VG+++WQVK+G+++D+ LI DDPA AK+
Sbjct:  232 KPEDWDK-PEHIPDPDATKPEDWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKE 341          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_DROME (Calreticulin OS=Drosophila melanogaster GN=Crc PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 6.353e-32
Identity = 60/119 (50.42%), Postives = 83/119 (69.75%), Query Frame = 2
Query:   11 DAIKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEEV 367
            D  KPE +D  P+ IPDP A KP++WD++ DG W+PP I NP +KG W+PK++ NPNYKG W+ P I NPE+  D  LY+ K I  +G ++WQVK+G+++DN+LI DD   A +   EV
Sbjct:  229 DDKKPEDWDK-PEHIPDPDATKPEDWDDEMDGEWEPPMIDNPEFKGEWQPKQLDNPNYKGAWEHPEIANPEYVPDDKLYLRKEICTLGFDLWQVKSGTIFDNVLITDDVELAAKAAAEV 346          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_DICDI (Calreticulin OS=Dictyostelium discoideum GN=crtA PE=1 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 1.084e-31
Identity = 55/116 (47.41%), Postives = 82/116 (70.69%), Query Frame = 2
Query:   17 IKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEE 364
            +KP G+D IP  I DP+A KP++W+E++DG W+ P I NP YKG W+ K+I NP YKG+W  P IDNPE+ +D +LY+   +  +G E+WQVK+GS+++N+++ D    AK   E+
Sbjct:  231 VKPAGHDDIPASIVDPEAVKPEDWNEEDDGEWEAPTIANPEYKGEWKAKKIPNPEYKGEWVHPLIDNPEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVTDSVEEAKDFSEK 346          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_CAEBR (Calreticulin OS=Caenorhabditis briggsae GN=crt-1 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.084e-31
Identity = 56/108 (51.85%), Postives = 82/108 (75.93%), Query Frame = 2
Query:    8 SDAIKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICD 331
            ++ +KPE ++  P+ IPDP AKKP++WD++ DG W+PP I NP YKG W+PK+IKNP YKGKW  P I+NPE+  D +LY+ +    +G ++WQVK+G+++DN+LI D
Sbjct:  223 AEDVKPEDWEK-PEHIPDPDAKKPEDWDDEMDGEWEPPMIDNPEYKGEWKPKQIKNPAYKGKWIHPEIENPEYTPDDELYLYENWGAIGFDLWQVKSGTIFDNVLITD 329          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_CAEEL (Calreticulin OS=Caenorhabditis elegans GN=crt-1 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.118e-31
Identity = 59/109 (54.13%), Postives = 81/109 (74.31%), Query Frame = 2
Query:    5 ASDAIKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICD 331
            A DA KPE ++  P+ IPDP AKKP++WD++ DG W+PP I NP YKG W+PK+IKNP YKGKW  P I+NPE+  D +LY  +    +G ++WQVK+G+++DNI+I D
Sbjct:  223 AEDA-KPEDWEK-PEHIPDPDAKKPEDWDDEMDGEWEPPMIDNPEYKGEWKPKQIKNPAYKGKWIHPEIENPEYTPDDELYSYESWGAIGFDLWQVKSGTIFDNIIITD 329          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_EUGGR (Calreticulin OS=Euglena gracilis PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 7.024e-31
Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 2
Query:   20 KPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEE 364
            KPE +D  P +IPDP A +PD+WDE+EDG W+ P I NP YKG W+ K+I NP YKG WK   I NPE+E D  +++   I  VG ++WQVK+G+++DNI++ D  A AK   ++
Sbjct:  228 KPEDWDKEPAQIPDPDATQPDDWDEEEDGKWEAPMISNPKYKGEWKAKKIPNPAYKGVWKPRDIPNPEYEADDKVHIFDEIAAVGFDLWQVKSGTIFDNIIVTDSLAEAKAFYDQ 342          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALR_ONCVO (Calreticulin OS=Onchocerca volvulus GN=crt-1 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 9.174e-31
Identity = 57/120 (47.50%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   11 DAIKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEEVL 370
            D  KPE +D  P+ IPDP AKKP++WD++ DG W+PP + NP YKG W+PK+ KNP YKGKW  P I+ P++  D +LYV   I  +G ++WQVK+G+++D++++ D    AK+  E+ L
Sbjct:  227 DDKKPEDWDK-PEHIPDPDAKKPEDWDDEMDGEWEPPMVDNPEYKGEWKPKQKKNPAYKGKWIHPEIEIPDYTPDDNLYVYDDIGAIGFDLWQVKSGTIFDDVIVTDSVEEAKKFGEKTL 345          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CALX_SOYBN (Calnexin homolog OS=Glycine max PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.733e-24
Identity = 56/136 (41.18%), Postives = 83/136 (61.03%), Query Frame = 2
Query:   11 DAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYK-----GPWRPKRIKNPNYKGKWKIPYIDNPEFE--------DDPDLYVL-----KPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVE 361
            +A KPEG+ D  P+EI DP+A KP++WD++EDG W+ PKI NP  +     G W+    +NP YKGKW  PYIDNP ++         +P+ + L     +PI  +GIE+W ++ G ++DN+LI +D   A+   E
Sbjct:  272 EAEKPEGWLDDEPEEIDDPEATKPEDWDDEEDGEWEAPKIENPKCEAAPGCGEWKRPTKRNPAYKGKWSAPYIDNPSYKGIWKPREIPNPEYFELAKPDFEPIAAIGIEIWTMQDGILFDNVLIANDDKVAESYRE 407          
BLAST of EY659064 vs. ExPASy Swiss-Prot
Match: CLGN_MOUSE (Calmegin OS=Mus musculus GN=Clgn PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.368e-24
Identity = 53/133 (39.85%), Postives = 74/133 (55.64%), Query Frame = 2
Query:    8 SDAIKPEGY-DSIPKEIPDPKAKKPDNWDEDEDGLW-----------------KPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQ 352
            S A+KP+G+ D  PK IP+PKA+KP++W +D DG W                 KPP I NP YKG WRP  I NPNY+G W    I NP++ +D   ++L     +G+E+W +     +DN +IC +   A Q
Sbjct:  306 SSAVKPDGWLDDEPKFIPNPKAEKPEDWSDDMDGEWEAPHIPNPACQIGCGEWKPPMIDNPKYKGIWRPPMINNPNYQGLWSPQKIPNPDYFEDDHPFLLTSFSALGLELWSMTPDIYFDNFIICSEKEVADQ 438          
The following BLAST results are available for this feature:
BLAST of EY659064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
CALR_BOVIN9.802e-3351.30Calreticulin OS=Bos taurus GN=CALR PE=1 SV=2[more]
CALR_BOMMO4.864e-3254.95Calreticulin OS=Bombyx mori GN=crt PE=1 SV=1[more]
CALR_DROME6.353e-3250.42Calreticulin OS=Drosophila melanogaster GN=Crc PE=... [more]
CALR_DICDI1.084e-3147.41Calreticulin OS=Dictyostelium discoideum GN=crtA P... [more]
CALR_CAEBR1.084e-3151.85Calreticulin OS=Caenorhabditis briggsae GN=crt-1 P... [more]
CALR_CAEEL4.118e-3154.13Calreticulin OS=Caenorhabditis elegans GN=crt-1 PE... [more]
CALR_EUGGR7.024e-3149.57Calreticulin OS=Euglena gracilis PE=2 SV=1[more]
CALR_ONCVO9.174e-3147.50Calreticulin OS=Onchocerca volvulus GN=crt-1 PE=2 ... [more]
CALX_SOYBN3.733e-2441.18Calnexin homolog OS=Glycine max PE=2 SV=1[more]
CLGN_MOUSE6.368e-2439.85Calmegin OS=Mus musculus GN=Clgn PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-A04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659064 ID=EY659064; Name=EY659064; organism=Citrus sinensis; type=EST; length=950bp
CCACGCGTCCGATGCCATCAAACCAGAGGGATATGATTCAATTCCAAAAG
AAATTCCGGACCCGAAAGCGAAGAAGCCTGACAATTGGGATGAAGACGAG
GATGGCCTATGGAAACCACCAAAGATACCAAATCCCGCATATAAAGGACC
ATGGAGGCCCAAGAGGATCAAGAACCCAAACTATAAAGGGAAGTGGAAGA
TCCCTTACATTGACAATCCAGAGTTTGAAGATGATCCCGATCTTTACGTG
CTTAAGCCAATTAAGTATGTAGGCATTGAAGTTTGGCAGGTCAAGGCGGG
TTCAGTTTATGACAACATTTTGATCTGTGATGATCCTGCATATGCAAAAC
AAGTGGTCGAGGAAGTACTTTCTAACAGGGAGATTGAAAAAGAGGGTTTT
GAGGAAGCAGAGAAAGTGAGAAAAGCGCGAGAGGAAGAGGAAGCTCAACG
AGCAAGAGAGGAAGGTGAAAAGAGGAGAAGAGAGAGGGGTTATGATCGAA
GAAGATATCGGGATCGCTACAGAGATAAATACCCGAAGCATGATTACTTA
GACGATGATTATCATGATGAGCTATGAAGCAGAGGTCCCTCACTGGTGTT
CCTCACCTGCCCTCCTCAGGGGTGCATCGCCTTTTATGTGAAGGATTGAT
GCTTGCAGCTGCTATAATCAGTAGCATTCGCCCCTGAGTTGTATTTTTGG
CTCTGATTATTGNAGTATTATTTGGAGGCAACACTCCAGCATTTCTAGAT
ACCGAACTAANTGAAGTTTGTTTTTATTGATGGGGCATGCTTTACTTTGA
AGGTAATAAAACACTTTTTTTTTTTAACCAAAAAAAAAAAAAAAAAAAAA
AAAAGGGCGGCGCTCTAAAGATCCAAGTTACGTACCCGGGATGGGACGCA
TAGTCCTCTAAAGGCCCCCAAATCAATCCCTGGCCCGCTTTAAACGCCGG
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