EY675543

Overview
NameEY675543
Unique NameEY675543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length964
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: ABCGI_DICDI (ABC transporter G family member 18 OS=Dictyostelium discoideum GN=abcG18 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.656e-17
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAY-NPATWMLEVSNISVE 306
            +DEPT GLD+ AA  VM  ++    +GR+V+CTIHQPS  IF+ FD LLLLKRGG  +Y GP G  S  ++ YF A  G+  I + + NPA ++L+V+   +E
Sbjct:  976 LDEPTSGLDSSAALKVMNLIKKIASSGRSVICTIHQPSTTIFKKFDHLLLLKRGGETVYFGPTGTNSKIVLNYF-AERGL--ICDPFKNPADFILDVTEDIIE 1075          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: PDH1_CANGA (ATP-binding cassette transporter CGR1 OS=Candida glabrata GN=PDH1 PE=3 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 4.531e-17
Identity = 46/123 (37.40%), Postives = 71/123 (57.72%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNK 369
            +DEPT GLD++ A    + ++   + G+ ++CTIHQPS  + + FD LL L++GG+ +Y G LG     +I+YFE   G  K     NPA WMLEV   +  +    D+ EV+ +S   ++ K
Sbjct: 1050 LDEPTSGLDSQTAWATCQLMKKLANHGQAILCTIHQPSAMLMQEFDRLLFLQKGGQTVYFGDLGKGCKTMIKYFED-HGAHKCPPDANPAEWMLEVVGAAPGSHANQDYHEVWRNSEQFKQVK 1171          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: ABCG3_DICDI (ABC transporter G family member 3 OS=Dictyostelium discoideum GN=abcG3 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.918e-17
Identity = 53/122 (43.44%), Postives = 73/122 (59.84%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRN 366
            +DEPT GLD+ AA  VM  V+   ++GRTVVCTIHQPS +IFE FD+LLLL + G+VIY G  G  S  +I++F +     + +   NPA ++LE++            A  Y  SS+H  N
Sbjct:  958 LDEPTSGLDSSAALKVMNCVKKIAESGRTVVCTIHQPSQEIFEKFDQLLLLDK-GKVIYFGDTGDNSSTVIQHFTSAG--YQYEHGRNPADFILEIAEHPPSTG---QSASDYFKSSIHYSN 1073          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: PDR10_YEAST (ATP-dependent permease PDR10 OS=Saccharomyces cerevisiae GN=PDR10 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.318e-16
Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADS 348
            +DEPT GLD++ A    + ++     G+ ++CTIHQPS  + + FD LL L+ GG+ +Y G LG     +I YFEA  G  K     NPA WMLE+   +       D+  ++ DS
Sbjct: 1088 LDEPTSGLDSQTAWSTCQLMKKLASRGQAILCTIHQPSALLMQEFDRLLFLQEGGQTVYFGELGKGCKTMINYFEA-HGAHKCPPDANPAEWMLEIVGAAPGTHASQDYFAIWRDS 1202          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: ABCG6_DICDI (ABC transporter G family member 6 OS=Dictyostelium discoideum GN=abcG6 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.543e-16
Identity = 60/183 (32.79%), Postives = 97/183 (53.01%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNIS--VE----NQLGIDFAEVYADSSLHQRNKGTYQRA*YSATWLVGSLLPNQIL--------STIFLTQFRACFWKKLLVLLEK 504
            +DEPT GLD+  A  V+  V        RTV+CT+HQPS  IFE FD+LLLLK+GG  IY GPLG++S  +++Y + +     IK   NPA +++ +++    VE     Q+ +D  + Y +S + ++     +          G L+P+  +        ++ ++TQFRA   +  L  L +
Sbjct: 1088 LDEPTSGLDSGDAFKVIDVVNKIAKVMNRTVICTVHQPSAAIFEFFDQLLLLKQGGETIYFGPLGNQSSVILDYCDKLG--MHIKPHINPADFVMTLADQGKMVEGPNGEQVPLDAKKAYFESDICKKEYEIME----------GQLIPDDFVIKTYDSRFASSWMTQFRALCMRSWLSRLRR 1258          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: ABCG5_DICDI (ABC transporter G family member 5 OS=Dictyostelium discoideum GN=abcG5 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.543e-16
Identity = 60/183 (32.79%), Postives = 97/183 (53.01%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNIS--VENQLG----IDFAEVYADSSLHQRNKGTYQRA*YSATWLVGSLLPNQIL--------STIFLTQFRACFWKKLLVLLEK 504
            +DEPT GLD+  A  V+  V        RTV+CT+HQPS  IFE FD+LLLLK+GG  IY GPLG++S  +++Y + +     IK   NPA +++ +++    VE   G    +D  + Y +S++ ++     +          G L+P+  +        ++ ++TQFRA   +  L  L +
Sbjct: 1063 LDEPTSGLDSGDAFKVIDVVNKIAKVMNRTVICTVHQPSAAIFEFFDQLLLLKKGGETIYFGPLGNQSSVILDYCDKLG--MHIKPHINPADFVMTLADEGKMVEGPNGEQEHLDAKKAYFESNICKKEYEIME----------GQLIPDDFVVKTYDSRFASSWMTQFRALCMRSWLSRLRR 1233          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: ABCG1_DICDI (ABC transporter G family member 1 OS=Dictyostelium discoideum GN=abcG1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.590e-14
Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGID 324
            +DEPT GLDA  +  VM  ++    +GRT++CTIHQP  +I++ FD LLLL  G  + Y      +++K +EYF A        E  NPA + L++ N  VE+Q   D
Sbjct:  287 LDEPTSGLDASTSFYVMSALKKLAKSGRTIICTIHQPRSNIYDMFDNLLLLGDGNTIYYG-----KANKALEYFNA--NGYHCSEKTNPADFFLDLINTQVEDQADSD 387          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: ABCGG_DICDI (ABC transporter G family member 16 OS=Dictyostelium discoideum GN=abcG16 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.843e-13
Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVS 291
            +DEPT GL + AA ++M+ ++     GR+V+CTIHQPS  IF+ FD +LLL +GG V Y G LG     ++ Y   +       +  NPA ++L+ S
Sbjct: 1007 LDEPTTGLTSVAAELIMQLIKRVALDGRSVICTIHQPSETIFKKFDSILLLTQGGFVAYFGELGPNCRTVLNYCSDLGF--NCPQGKNPADFLLDFS 1101          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: AB26G_ARATH (ABC transporter G family member 26 OS=Arabidopsis thaliana GN=ABCG26 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.277e-11
Identity = 41/110 (37.27%), Postives = 67/110 (60.91%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWML-----EVSNISVENQL 315
            +DEPT GLD+ +A  ++  ++     GRTV+ TIHQPS  +F  FD+LLL+  G    Y      ++ + +EYF ++  +P+I  A NPA ++L     +VS+IS+ ++L
Sbjct:  260 LDEPTSGLDSTSATKLLHILQGVAKAGRTVITTIHQPSSRMFHMFDKLLLISEGHPAFYG-----KARESMEYFSSLRILPEI--AMNPAEFLLDLATGQVSDISLPDEL 362          
BLAST of EY675543 vs. ExPASy Swiss-Prot
Match: AB22G_ARATH (ABC transporter G family member 22 OS=Arabidopsis thaliana GN=ABCG22 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.178e-11
Identity = 42/110 (38.18%), Postives = 68/110 (61.82%), Query Frame = 1
Query:    1 MDEPTPGLDARAAAIVMRPVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSN-----ISVENQL 315
            +DEPT GLD+  A   +  + +  + G+TV+ TIHQPS  +F  FD+L+LL RG  ++Y G    +S + ++YF ++   P I  A NPA ++L+++N     ISV ++L
Sbjct:  326 LDEPTSGLDSTTALRTILMLHDIAEAGKTVITTIHQPSSRLFHRFDKLILLGRGS-LLYFG----KSSEALDYFSSIGCSPLI--AMNPAEFLLDLANGNINDISVPSEL 428          
The following BLAST results are available for this feature:
BLAST of EY675543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
ABCGI_DICDI2.656e-1747.57ABC transporter G family member 18 OS=Dictyosteliu... [more]
PDH1_CANGA4.531e-1737.40ATP-binding cassette transporter CGR1 OS=Candida g... [more]
ABCG3_DICDI5.918e-1743.44ABC transporter G family member 3 OS=Dictyostelium... [more]
PDR10_YEAST1.318e-1637.93ATP-dependent permease PDR10 OS=Saccharomyces cere... [more]
ABCG6_DICDI6.543e-1632.79ABC transporter G family member 6 OS=Dictyostelium... [more]
ABCG5_DICDI6.543e-1632.79ABC transporter G family member 5 OS=Dictyostelium... [more]
ABCG1_DICDI3.590e-1439.81ABC transporter G family member 1 OS=Dictyostelium... [more]
ABCGG_DICDI8.843e-1340.21ABC transporter G family member 16 OS=Dictyosteliu... [more]
AB26G_ARATH1.277e-1137.27ABC transporter G family member 26 OS=Arabidopsis ... [more]
AB22G_ARATH2.178e-1138.18ABC transporter G family member 22 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-A04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675543 ID=EY675543; Name=EY675543; organism=Citrus sinensis; type=EST; length=964bp
ATGGATGAGCCTACCCCTGGGCTTGATGCTAGAGCTGCTGCTATTGTCAT
GCGTCCTGTTAGAAATACAGTGGATACAGGGAGAACAGTTGTGTGTACAA
TCCACCAGCCAAGCATAGACATTTTTGAAGCATTTGACGAGCTATTGTTG
TTGAAAAGAGGGGGCCGCGTCATTTATGCTGGACCTCTTGGTCACGAATC
TCACAAGCTCATAGAGTATTTTGAGGCTGTTCCAGGGGTTCCTAAAATTA
AGGAAGCATACAATCCTGCAACATGGATGCTGGAGGTCAGTAACATTTCA
GTTGAGAATCAACTGGGAATTGATTTTGCTGAAGTTTATGCCGATTCATC
GCTTCATCAGAGGAATAAAGGAACTTATCAAAGAGCTTAATACTCCGCCA
CCTGGCTCGTCGGATCTCTACTTCCCAACCAAATACTCTCAACCATTTTT
TTAACCCAATTTAGGGCTTGTTTCTGGAAAAAATTATTGGTCTTATTGGA
GAAAACCCTTCGTAACATGCTATCCGATTTGGGCAGGACTCCTGTCCATT
GCAATTTTCTTTGGGTAAATCTACTGGGGGAACAAAGGAAAAAAAAAATT
TCCAAAAAAACAAGATCGGGCAAAAACTTTTTTGGAAACTTAGGAATTTT
ATTTTGTAATTTTTTCCTTGGGAAACCCACGAAAGGCCTTTAGCCCTGGA
ATACCCGGTTAAAACGGCAGTTTTGAGAAAAAAAAGTTAATGATTATCCG
TGAAAGAAAAAACTGCAAGGGGAAGCGCGGTGGGAGAGAAGAATGTAAAC
GAATAAAACATATGGGGACAGAAATGAAGGAACGAGACAAATAAAGAAAA
AAGTAATAAATGTCTATCCAAATGAATACGACAAGAGGTGGTGAGTGAAT
GACGCTGTATGACAGAAAAATGAAAACAAATTCGTGTGAGTGTCGACTGG
GAGGGATGCAATGG
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