EY675538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFCS_AERPE (Replication factor C small subunit OS=Aeropyrum pernix GN=rfcS PE=3 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 5.813e-19 Identity = 39/91 (42.86%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 215 WVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDFGYTQS 487 WVEKYRP+SL D+ + +V+ + + + +PHLL GPPGTGKT+ A+A L+G Y +LEL+ASD++GI+V+R+++++F +++ Sbjct: 9 WVEKYRPRSLDDIVDQKHVVERLKQFVKQRNMPHLLFAGPPGTGKTTAAHALAHDLFGENYRQYMLELNASDERGINVIREKVKEFARSRT 99
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFCS_NATPD (Replication factor C small subunit OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rfcS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 7.592e-19 Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 2 Query: 215 WVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDF 472 W+EKYRPQ+L D+ H I + + + ++N LPHLL GP G GKT+ A+A+++YG + LEL+ASD +GIDVVR +I+ F Sbjct: 14 WIEKYRPQTLDDIVGHESITERLKQYIAQNDLPHLLFAGPAGVGKTTAATAIAKEVYGDDWRENFLELNASDQRGIDVVRDRIKSF 99
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFCS_ARCFU (Replication factor C small subunit OS=Archaeoglobus fulgidus GN=rfcS PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 9.916e-19 Identity = 40/89 (44.94%), Postives = 62/89 (69.66%), Query Frame = 2 Query: 215 WVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDFGYT 481 WVEKYRP++L +V +++ + +PHLL GPPGTGKT+T +A+AR L+G + + +E++ASD++GIDVVR +I++F T Sbjct: 7 WVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERGIDVVRHKIKEFART 95
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFCS_STAMF (Replication factor C small subunit OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rfcS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.885e-18 Identity = 39/90 (43.33%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 215 WVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDFGYTQ 484 W EKYRP++L ++ +IV + + E +PHLL GPPGTGKT+ +A L+G Y +LEL+ASD++GIDV+R ++++F T+ Sbjct: 13 WAEKYRPKTLDEIVDQEEIVSRLKQFVKERNMPHLLFAGPPGTGKTTAAHCLAHDLFGENYRQYMLELNASDERGIDVIRSKVKEFARTR 102
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC2_CHICK (Replication factor C subunit 2 OS=Gallus gallus GN=RFC2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.885e-18 Identity = 42/87 (48.28%), Postives = 61/87 (70.11%), Query Frame = 2 Query: 212 PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDF 472 PWVEKYRP L +V + D V ++ E +P++++ GPPGTGKT++IL +AR L G + +LEL+AS+D+GIDVVR +I+ F Sbjct: 42 PWVEKYRPLKLCEVVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMF 128
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC4_CAEEL (Replication factor C subunit 4 OS=Caenorhabditis elegans GN=rfc-4 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.768e-18 Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 203 KASPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQ-YHNMILELSASDDKGIDVVRQQIQDF 472 K W EKYRP++L D+A ++V + LPHLL YGPPGTGKTS LA R+L+ +H+ +L+L+ASD++GI VVRQ+IQ F Sbjct: 13 KVLTWTEKYRPKTLDDIAYQDEVVTMLKGALQGRDLPHLLFYGPPGTGKTSAALAFCRQLFPKNIFHDRVLDLNASDERGIAVVRQKIQSF 103
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC4_SCHPO (Replication factor C subunit 4 OS=Schizosaccharomyces pombe GN=rfc4 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 6.427e-18 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 212 PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDFGYTQSLL 493 PWVEKYRP L D+ + + +D + + E +PHL++ G PG GKT++IL +A L G Y +LEL+ASD++GIDVVR +I+ F + +L Sbjct: 22 PWVEKYRPIVLDDIVGNEETIDRLKVIAKEGNMPHLVISGMPGIGKTTSILCLAHALLGPAYKEGVLELNASDERGIDVVRNRIKAFAQKKVIL 115
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC2_RAT (Replication factor C subunit 2 OS=Rattus norvegicus GN=Rfc2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 8.394e-18 Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = 2 Query: 212 PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDF 472 PWVEKYRP L ++ + D V ++ E +P++++ GPPGTGKT++IL +AR L G + +LEL+AS+D+GIDVVR +I+ F Sbjct: 32 PWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMF 118
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC2_MOUSE (Replication factor C subunit 2 OS=Mus musculus GN=Rfc2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 8.394e-18 Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = 2 Query: 212 PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDF 472 PWVEKYRP L ++ + D V ++ E +P++++ GPPGTGKT++IL +AR L G + +LEL+AS+D+GIDVVR +I+ F Sbjct: 32 PWVEKYRPLKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMF 118
BLAST of EY675538 vs. ExPASy Swiss-Prot
Match: RFC2_BOVIN (Replication factor C subunit 2 OS=Bos taurus GN=RFC2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 8.394e-18 Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = 2 Query: 212 PWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELSASDDKGIDVVRQQIQDF 472 PWVEKYRP L ++ + D V ++ E +P++++ GPPGTGKT++IL +AR L G + +LEL+AS+D+GIDVVR +I+ F Sbjct: 35 PWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMF 121 The following BLAST results are available for this feature:
BLAST of EY675538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675538 ID=EY675538; Name=EY675538; organism=Citrus sinensis; type=EST; length=1095bpback to top |