EY675396

Overview
NameEY675396
Unique NameEY675396
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1017
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675396 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.913e-13
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 2
Query:  173 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 370
            F +D  +TW D     +  G  + L LDQ+SG GF SK +YL+G+V M+IKLVPG+SAGTVT FY+
Sbjct:   28 FNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYL 93          
BLAST of EY675396 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.499e-13
Identity = 34/67 (50.75%), Postives = 50/67 (74.63%), Query Frame = 2
Query:  170 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 370
            +F E+F +TW +   +   GG+ + L LD+ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y+
Sbjct:   26 SFNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYL 92          
BLAST of EY675396 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.264e-13
Identity = 37/66 (56.06%), Postives = 46/66 (69.70%), Query Frame = 2
Query:  173 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 370
            F  ++  TW+  H++   GG  IQL LD+ +G GF SK  YLFG  SM IK+VPGDSAGTVTAFY+
Sbjct:   33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYL 98          
BLAST of EY675396 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.264e-13
Identity = 32/67 (47.76%), Postives = 49/67 (73.13%), Query Frame = 2
Query:  170 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 370
            +F ++F +TW +     +E G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y+
Sbjct:   25 SFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYL 91          
BLAST of EY675396 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.263e-13
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 2
Query:  173 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 370
            F E F +TW +      E G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y+
Sbjct:   30 FYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYL 95          
BLAST of EY675396 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.567e-13
Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 2
Query:  167 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 370
            A F  D ++TW D   +    G  + L LD++SG GF SK +YLFG+VSM++KLVPG+SAGTVT  Y+
Sbjct:   21 ANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYL 88          
BLAST of EY675396 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.496e-13
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 2
Query:  170 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYVC 373
            +F ++F + WS+ H    + G    L LD ++GCGF +K  Y FG  SMK+KLV GDSAG VTA+Y+C
Sbjct:   24 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMC 91          
BLAST of EY675396 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.496e-13
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 2
Query:  173 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 370
            F  ++  TW+  H++ + GG  + LVLD+ +G GF SK  YLFG  SM IK+V GDSAGTVTAFY+
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYL 97          
BLAST of EY675396 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.240e-12
Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 2
Query:  167 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 370
            A F  D  V W +   + +  G+ + L LD++SG GF SK +YLFG++ M+IKLVPG+SAGTVT FY+
Sbjct:   22 ADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYL 89          
BLAST of EY675396 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.763e-12
Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 2
Query:  167 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 370
            A F  D ++TW D   +    G  + L LD+ SG GF SK +YLFG++ M+IKLV G+SAGTVTA+Y+
Sbjct:   24 ANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYL 91          
The following BLAST results are available for this feature:
BLAST of EY675396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
XTH21_ARATH1.913e-1353.03Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH2.499e-1350.75Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN3.264e-1356.06Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH3.264e-1347.76Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH4.263e-1350.00Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH22_ARATH5.567e-1351.47Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH8_ARATH9.496e-1348.53Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH9.496e-1353.03Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH1.240e-1250.00Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH23_ARATH2.763e-1250.00Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-010-A04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675396 ID=EY675396; Name=EY675396; organism=Citrus sinensis; type=EST; length=1017bp
CCCACGCGTCCGCCACACCTTTAAAAAAAGATCTCTTTCTAATTAGTAAC
AGATAATACCTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCTAAGA
AATGCAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTG
CGTTTTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACATGGT
CCGATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTT
CTAGACCAAAATTCAGGATGTGGGTTTGCCTCCAAAAGGCAGTACTTGTT
CGGGCGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCTGGAA
CTGTCACTGCATTTTATGTGTGTTAGTTAACTGTGTATATTTAGCGTTTA
ATTTATTGTGCGATTCTCTGTTTCAAAAGTTGAAATTTTGGCACATGAAA
GGATACTAACTTTTAATTATTTTTATTTTGGTTTCTTAATTAATTTTTTC
AAAAATGAAATTCCACACCGAAAATGTGAGAAACAACCTTGATTTTGAAT
TCCTGGGGAAACCGAAAGGGGTCAGCCTTTCCACGGCCCCAACCAATAAT
TTTTGCAAATTGGAAAAAGGGAATAAAAAACAAAAGAGGGAACCCCTCTG
GTTTGACCCTGGCTTCCAAATTTTCACCTTTTTAACCCTTTTCTCCTGGG
AAACATCACCCTAATTTGTCTTTCATTAGAGGATTGAAGTGGGCCCTATC
AGGGGGTTTAAAAAAACCATGGGAAAAGGGGGCCACCTTTTCCAAAAGGA
AACAACACCCCATGGGGGGGTGGTTAACCCCCACGCCGTAGGGGGGAAAA
CAAAAAAACGAAGTGGGGCAAAAAAAAAAAAGGTGGGGTCCTCAAAAAAA
AAAAAATAAAGAATGGGGAAAAGCAAAACCACTCTCCCTTTTTTTTTTTT
ACATATATATTTTAATGACTAGAAAGCATTATTTTTTATATAAAAGTTGA
TAGAGGGGGGGTGGGAG
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