EY675319

Overview
NameEY675319
Unique NameEY675319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1037
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.656e-47
Identity = 91/120 (75.83%), Postives = 99/120 (82.50%), Query Frame = 1 
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWACQVVLMG VEGYR+                +FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct:  147 LGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
[Close]
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.656e-47
Identity = 91/120 (75.83%), Postives = 99/120 (82.50%), Query Frame = 1 
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWACQVVLMG VEGYR+                +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct:  148 LGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
[Close]
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.081e-47
Identity = 90/120 (75.00%), Postives = 99/120 (82.50%), Query Frame = 1 
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWACQV+LMG VEGYR+                +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct:  146 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
[Close]
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 7.942e-47
Identity = 91/120 (75.83%), Postives = 97/120 (80.83%), Query Frame = 1 
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LG+P L HAQSILAIWACQV+LMG +EGYR+                 FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct:  159 LGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
[Close]
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.037e-46
Identity = 91/120 (75.83%), Postives = 99/120 (82.50%), Query Frame = 1 
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWACQVVLMG VEGYRI                +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct:  146 LGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
[Close]
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.037e-46
Identity = 90/120 (75.00%), Postives = 98/120 (81.67%), Query Frame = 1 
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWACQVVLMG +EGYR+                 FDPLGLADDP+ FA++KVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct:  146 LGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
[Close]
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.037e-46
Identity = 90/120 (75.00%), Postives = 99/120 (82.50%), Query Frame = 1 
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWACQVVLMG VEGYR+                +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  148 LGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
[Close]
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.037e-46
Identity = 90/120 (75.00%), Postives = 99/120 (82.50%), Query Frame = 1 
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWACQVVLMG VEGYR+                +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  147 LGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
[Close]
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 1.037e-46
Identity = 93/120 (77.50%), Postives = 98/120 (81.67%), Query Frame = 1 
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWA QVVLMG VEGYRI                AFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct:  146 LGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
[Close]
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.355e-46
Identity = 90/120 (75.00%), Postives = 99/120 (82.50%), Query Frame = 1 
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWACQVVLMG VEGYR+                +FDPLGLADDP+ FAEL+VKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct:  147 LGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
The following BLAST results are available for this feature:
BLAST of EY675319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
CB24_PETSP4.656e-4775.83Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB23_NICPL4.656e-4775.83Chlorophyll a-b binding protein C, chloroplastic O... [more]
CB22_TOBAC6.081e-4775.00Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB2A_PINSY7.942e-4775.83Chlorophyll a-b binding protein type 2 member 1A, ... [more]
CB2B_SOLLC1.037e-4675.83Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB29_MAIZE1.037e-4675.00Chlorophyll a-b binding protein M9, chloroplastic ... [more]
CB23_PETSP1.037e-4675.00Chlorophyll a-b binding protein 22R, chloroplastic... [more]
CB21_TOBAC1.037e-4675.00Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB21_ORYSJ1.037e-4677.50Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB21_PETSP1.355e-4675.00Chlorophyll a-b binding protein 13, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-A08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675319 ID=EY675319; Name=EY675319; organism=Citrus sinensis; type=EST; length=1037bp
CTTGGCAACCCCAACCTCACTCATGCTCAGAGCATTTTGGCTATCTGGGC
CTGCCAGGTCGTGCTTATGGGTTTTGTTGAAGGATACAGAATTGGTGGCG
GTCCTCTTGGTGAAGGACTTGACCCACTTTACCCTGGTGGTGCTTTTGAC
CCACTTGGTTTGGCTGATGACCCCGATCAATTTGCTGAGTTGAAGGTCAA
GGAGCTCAAGAATGGCCGTCTGGCTATGTTCTCCATGTTTGGATTCTTTG
TTCAGGCTATTGTCACTGGGAAGGGTCCAATTGAGAACCTCTACGACCAC
ATTGCTGATCCTGTGGCCAACAATGCCTGGGCTTATGCCACTAACTTTGT
TCCCGGAAAGTAAAGAAACTCATTGACTTTGATGGTGTCTTTTTCAGCTG
TAACATTATTCTATGTATCGTATGTGCTTTTGTGGAAAACTCTGTCATGG
ACTTATTAGTAACTCTGTAATGTTACCCTTAAAAATGCTATGCTCCTGAT
CTTTTATTTCCATCAAAATTTCAAAAAAAAAAAAAAAAAAAGGGGCGGCC
CCCCCTAGAGGATCCCAGCCTTATCTACGCCTTGCAGGCGACGTCCATAG
CTCCTTCCTAAGTGGTCCCCCAAAATTCAATTCCCGGGCCCCTCTTTTTT
CCAACGTCCTTGGCCTGGGGAAAACCCTTGGGCTTACCCACACTTAAACC
CCCTTTGGCCCCAAATCCCCCCCCTTTTTCCCCCCGCGGGGCCATAAATA
ACCAAAAAAAGGCCCCCCCCCCCATCTCCCCCTTCCCCAACATTTTGTGC
CCCCCCCGGTAAAAGGGGGGAAAAGGGGGCCCCCCCCCCGCGGAAACGGG
CCGCCTTAAAGACCCCGGGGGGGGGGGTGGGGGGGGGGTATACGCCAAAA
CGCGGTGGGGGACCAGTCAATACCATTTTGCACGCGCCCCGCCCTCAATT
AGCCCCCCCCCCTCACCTTTTTTTTGCTTTTTTTGTCTTATCTCTTCTTT
TCTTTTTTTTTATTCGCCGCACCCAAATAATTTTTAT
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