EY675319

Overview
NameEY675319
Unique NameEY675319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1037
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.769e-46
Identity = 89/120 (74.17%), Postives = 99/120 (82.50%), Query Frame = 1
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWACQVVLMG VEGYR+                +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQA+VTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  147 LGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266          
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.311e-46
Identity = 90/120 (75.00%), Postives = 98/120 (81.67%), Query Frame = 1
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWACQV+LMG VEGYRI                +FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW +ATNFVPGK
Sbjct:  148 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267          
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 2.311e-46
Identity = 92/120 (76.67%), Postives = 98/120 (81.67%), Query Frame = 1
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWA QVVLMG VEGYRI                +FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct:  142 LGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261          
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 3.018e-46
Identity = 91/120 (75.83%), Postives = 98/120 (81.67%), Query Frame = 1
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWA QV+LMG VEGYRI                +FDPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  150 LGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269          
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.941e-46
Identity = 89/120 (74.17%), Postives = 97/120 (80.83%), Query Frame = 1
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LG+P L HAQSILAIWACQV+LMG +EGYR+                 FDPLGLADDPD FA++KVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct:  159 LGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278          
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.941e-46
Identity = 89/120 (74.17%), Postives = 98/120 (81.67%), Query Frame = 1
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWACQVVLMG VEGYR+                +FDPLGLA+DP+ FAELKVK +KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  148 LGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267          
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.941e-46
Identity = 92/120 (76.67%), Postives = 96/120 (80.00%), Query Frame = 1
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWACQVVLMG VEGYRI                +FDPLGLADDP+ F ELKVKELK GRLAM SMFGFFVQAIVTGKGP+ENL DHIADPV NNAWAYATNFVPGK
Sbjct:  146 LGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265          
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.941e-46
Identity = 90/120 (75.00%), Postives = 98/120 (81.67%), Query Frame = 1
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWACQVVLMG VEGYR+                +FDPLGLADD + FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct:  145 LGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264          
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 5.148e-46
Identity = 89/119 (74.79%), Postives = 96/119 (80.67%), Query Frame = 1
Query:    4 GNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            GNP+L HAQSILAIWACQVVLMG VEGY +                +FDPLGL DDP++FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ DPV NNAWAYATNFVPGK
Sbjct:  146 GNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPGK 264          
BLAST of EY675319 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 6.723e-46
Identity = 90/120 (75.00%), Postives = 98/120 (81.67%), Query Frame = 1
Query:    1 LGNPNLTHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 360
            LGNP+L HAQSILAIWA QV+LMG VEGYRI                +FDPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAW+YATNFVPGK
Sbjct:  149 LGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268          
The following BLAST results are available for this feature:
BLAST of EY675319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
CB25_NICPL1.769e-4674.17Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB2A_SPIOL2.311e-4675.00Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB22_ORYSJ2.311e-4676.67Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB22_PEA3.018e-4675.83Chlorophyll a-b binding protein AB80, chloroplasti... [more]
CB2A_PYRPY3.941e-4674.17Chlorophyll a-b binding protein 1A, chloroplastic ... [more]
CB25_TOBAC3.941e-4674.17Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB22_MAIZE3.941e-4676.67Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB22_HORVU3.941e-4675.00Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB48_MAIZE5.148e-4674.79Chlorophyll a-b binding protein 48, chloroplastic ... [more]
CB28_PEA6.723e-4675.00Chlorophyll a-b binding protein 8, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-A08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675319 ID=EY675319; Name=EY675319; organism=Citrus sinensis; type=EST; length=1037bp
CTTGGCAACCCCAACCTCACTCATGCTCAGAGCATTTTGGCTATCTGGGC
CTGCCAGGTCGTGCTTATGGGTTTTGTTGAAGGATACAGAATTGGTGGCG
GTCCTCTTGGTGAAGGACTTGACCCACTTTACCCTGGTGGTGCTTTTGAC
CCACTTGGTTTGGCTGATGACCCCGATCAATTTGCTGAGTTGAAGGTCAA
GGAGCTCAAGAATGGCCGTCTGGCTATGTTCTCCATGTTTGGATTCTTTG
TTCAGGCTATTGTCACTGGGAAGGGTCCAATTGAGAACCTCTACGACCAC
ATTGCTGATCCTGTGGCCAACAATGCCTGGGCTTATGCCACTAACTTTGT
TCCCGGAAAGTAAAGAAACTCATTGACTTTGATGGTGTCTTTTTCAGCTG
TAACATTATTCTATGTATCGTATGTGCTTTTGTGGAAAACTCTGTCATGG
ACTTATTAGTAACTCTGTAATGTTACCCTTAAAAATGCTATGCTCCTGAT
CTTTTATTTCCATCAAAATTTCAAAAAAAAAAAAAAAAAAAGGGGCGGCC
CCCCCTAGAGGATCCCAGCCTTATCTACGCCTTGCAGGCGACGTCCATAG
CTCCTTCCTAAGTGGTCCCCCAAAATTCAATTCCCGGGCCCCTCTTTTTT
CCAACGTCCTTGGCCTGGGGAAAACCCTTGGGCTTACCCACACTTAAACC
CCCTTTGGCCCCAAATCCCCCCCCTTTTTCCCCCCGCGGGGCCATAAATA
ACCAAAAAAAGGCCCCCCCCCCCATCTCCCCCTTCCCCAACATTTTGTGC
CCCCCCCGGTAAAAGGGGGGAAAAGGGGGCCCCCCCCCCGCGGAAACGGG
CCGCCTTAAAGACCCCGGGGGGGGGGGTGGGGGGGGGGTATACGCCAAAA
CGCGGTGGGGGACCAGTCAATACCATTTTGCACGCGCCCCGCCCTCAATT
AGCCCCCCCCCCTCACCTTTTTTTTGCTTTTTTTGTCTTATCTCTTCTTT
TCTTTTTTTTTATTCGCCGCACCCAAATAATTTTTAT
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