EY675312
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 5.694e-30 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 2 TRPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 +R AML AL CVFP + ++ G+ +A WFKAG+ IFS+ GL YLGNP I A +ILAIWA + LMG VE Y I GG G+ + PLYPGG++DP AD+P+ FAELK E+ NGR Sbjct: 98 SRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGR 214 HSP 2 Score: 25.0238 bits (53), Expect = 5.694e-30 Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V AI K PL+ + + D Sbjct: 215 LAMFSMFGFFVQAIVTGKGPLENLADHLAD 244
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.650e-30 Identity = 62/116 (53.45%), Postives = 81/116 (69.83%), Query Frame = 2 Query: 5 RPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 R AML AL CVFP + ++ G+ +A WFKAG+ IFS+ GL YLGNP + A +ILAIWAC+ LMG VE Y + GG G+ + PLYPGG++DP A++P+ FAELK + NGR Sbjct: 105 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGR 220 HSP 2 Score: 25.0238 bits (53), Expect = 9.650e-30 Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V AI K PL+ + + D Sbjct: 221 LAMFSMFGFFVQAIVTGKGPLENLADHLAD 250
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 9.654e-30 Identity = 66/117 (56.41%), Postives = 81/117 (69.23%), Query Frame = 2 Query: 2 TRPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 +R AML AL CVFP + S+ G+ +A WFKAG+ IFS+ GL YLGNP I A +ILAIWA + LMG VE Y I GG G+ P+YPGG++DP AD+P+ FAELK EL NGR Sbjct: 100 SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGR 216 HSP 2 Score: 24.2534 bits (51), Expect = 9.654e-30 Identity = 12/22 (54.55%), Postives = 14/22 (63.64%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLK 419 LAM S+ GF V AI K PL+ Sbjct: 217 LAMFSMFGFFVQAIVTGKGPLE 238
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.256e-29 Identity = 62/116 (53.45%), Postives = 79/116 (68.10%), Query Frame = 2 Query: 5 RPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 R AML AL C+ P + ++ G+ +A WFKAG IFS+ GL YLGNP + A +ILAIWAC+ LMG VE Y + GG G+ P+YPGG++DP AD+PD FAELK E+ NGR Sbjct: 106 RWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGR 221 HSP 2 Score: 25.7942 bits (55), Expect = 1.256e-29 Identity = 14/33 (42.42%), Postives = 18/33 (54.55%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKDTEA 452 LAM S+ GF V AI K PL+ + + D A Sbjct: 222 LAMFSMFGFFVQAIVTGKGPLENLNDHLADPVA 254
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.635e-29 Identity = 63/117 (53.85%), Postives = 80/117 (68.38%), Query Frame = 2 Query: 2 TRPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 +R AML AL CVFP + ++ G+ +A WFKAG IFS+ GL YLG+P I A +ILAIWAC+ LMG +E Y + GG G+ P+YPGG +DP AD+PD FAELK E+ NGR Sbjct: 115 SRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGR 231 HSP 2 Score: 24.2534 bits (51), Expect = 1.635e-29 Identity = 12/30 (40.00%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V AI K P++ + + D Sbjct: 232 LAMFSMFGFFVQAIVTGKGPIENLADHLAD 261
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.635e-29 Identity = 63/116 (54.31%), Postives = 80/116 (68.97%), Query Frame = 2 Query: 5 RPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 R AML AL CVFP + ++ G+ +A WFKAG IFS+ GL YLGNP + A +ILAIWAC+ LMG VE Y I GG G+ P+YPGG++DP A++P+ FAELK E+ NGR Sbjct: 112 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 227 HSP 2 Score: 24.2534 bits (51), Expect = 1.635e-29 Identity = 12/30 (40.00%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V AI K P++ + + D Sbjct: 228 LAMFSMFGFFVQAIVTGKGPIENLADHLAD 257
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.131e-29 Identity = 62/116 (53.45%), Postives = 80/116 (68.97%), Query Frame = 2 Query: 5 RPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 R AML AL CVFP + ++ G+ +A WFK G+ IFS+ GL YLGNP + A +ILAIWAC+ LMG VE Y + GG G+ + PLYPGG++DP AD+ + FAELK E+ NGR Sbjct: 102 RWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGR 217 HSP 2 Score: 25.0238 bits (53), Expect = 2.131e-29 Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V AI K PL+ + + D Sbjct: 218 LAMFSMFGFFVQAIVTGKGPLENLADHLAD 247
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.774e-29 Identity = 63/116 (54.31%), Postives = 80/116 (68.97%), Query Frame = 2 Query: 5 RPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 R AML AL CVFP +F++ G+ +A W KAG+ IFS+ GL YLGNP + A +ILAIWAC+ LMG VE Y + GG G + PLYPGG++DP A++P+ FAELK E NGR Sbjct: 105 RWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGR 220 HSP 2 Score: 24.2534 bits (51), Expect = 2.774e-29 Identity = 12/30 (40.00%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF + AI K PL+ + + D Sbjct: 221 LAMFSMFGFFIQAIVTGKGPLENLADHLVD 250
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.612e-29 Identity = 62/116 (53.45%), Postives = 81/116 (69.83%), Query Frame = 2 Query: 5 RPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 R AML AL CVFP + ++ G+ +A WFKAG+ IFS+ GL YLGNP + A +ILAIWAC+ LMG VE Y + G G+ + PLYPGG++DP A++P+ FAELK E+ NGR Sbjct: 104 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 219 HSP 2 Score: 24.2534 bits (51), Expect = 3.612e-29 Identity = 12/30 (40.00%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V A+ K PL+ + + D Sbjct: 220 LAMFSMFGFFVQALVTGKGPLENLADHLAD 249
BLAST of EY675312 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.624e-29 Identity = 65/117 (55.56%), Postives = 81/117 (69.23%), Query Frame = 2 Query: 2 TRPAMLEALFCVFPVIFSQKGLHLNKAAWFKAGTSIFSDSGLHYLGNP*HIQASNILAIWACRDELMGFVE*Y*IGGGNPGKRLHPLYPGGAYDPGVFADNPDKFAELKDNELNNGR 352 +R AML AL CVFP + S+ G+ +A WFKAG+ IFS+ GL YLGNP + A +ILAIWA + LMG VE Y I GG G+ + PLYPGG++DP A+ P+ FAELK EL NGR Sbjct: 65 SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGR 181 HSP 2 Score: 24.2534 bits (51), Expect = 3.624e-29 Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 354 LAMISLLGFLVHAIDNRKIPLKCAREPIKD 443 LAM S+ GF V AI K PL+ + + D Sbjct: 182 LAMFSMFGFFVPAIVTGKGPLENLADHLAD 211 The following BLAST results are available for this feature:
BLAST of EY675312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675312 ID=EY675312; Name=EY675312; organism=Citrus sinensis; type=EST; length=1025bpback to top |