EY675147

Overview
NameEY675147
Unique NameEY675147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1033
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB1 (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=glyA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 5.851e-34
Identity = 72/129 (55.81%), Postives = 94/129 (72.87%), Query Frame = 3
Query:   93 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHG 479
            ++L+  DPE+ D+I+KE+ RQ   IELIASENFTS +V+E++GS LTNKY+EG P  RYYGG EF+DE+E+L R R  + F  +      NVQP+SGS AN A Y +VL+  D I+G+DL  GGHLTHG
Sbjct:    4 TNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMESMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG 128          
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYA_SOLUE (Serine hydroxymethyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.642e-34
Identity = 76/129 (58.91%), Postives = 91/129 (70.54%), Query Frame = 3
Query:   96 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGY 482
            +L  VDPEI+  I+ E  RQ   +ELIASENFTS AV+EA GS  TNKY+EG PG RYYGG E+ D +ENL R RA + F  +     VNVQP+SGS AN AAY AV+ P D +MGL+L  GGHLTHG+
Sbjct:   10 TLAEVDPEIYQAIQHETARQDGQLELIASENFTSEAVLEATGSVFTNKYAEGYPGKRYYGGCEYTDVVENLARERASKLFGAE----YVNVQPHSGSQANQAAYGAVVSPGDTVMGLNLAHGGHLTHGH 134          
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYA_DESRM (Serine hydroxymethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.642e-34
Identity = 76/130 (58.46%), Postives = 91/130 (70.00%), Query Frame = 3
Query:   90 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHG 479
            N  L   DPE+   IE E +RQ R IELIASENF S AV+EA GS LTNKY+EG PG RYYGG EF+D  E+L  SRA + F  D      NVQP+SG+ ANFA Y A+L+P D+I+G++L  GGHLTHG
Sbjct:    3 NGKLAQTDPELAKAIELEHQRQQRNIELIASENFVSPAVLEAQGSILTNKYAEGYPGKRYYGGCEFVDIAESLAISRAKKLFGAD----HANVQPHSGAQANFAVYFALLQPGDKILGMNLAHGGHLTHG 128          
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBL (Serine hydroxymethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.642e-34
Identity = 73/131 (55.73%), Postives = 91/131 (69.47%), Query Frame = 3
Query:   90 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGY 482
            + SL   DP+I + I  E+RRQ  G+ELIASENF S AV++A GS  TNKY+EG PG RYYGG E+ D +ENL R RA + F  +      NVQP+SGS AN  AY A+L+P D I+GL+L  GGHLTHG+
Sbjct:    6 SQSLNEEDPQIAEAIANEERRQHEGLELIASENFVSEAVLQAAGSVFTNKYAEGYPGKRYYGGCEYADVVENLARDRAKELFGAE----HANVQPHSGSSANMEAYGAILQPGDTILGLNLAHGGHLTHGH 132          
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYA_THELT (Serine hydroxymethyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.981e-34
Identity = 73/127 (57.48%), Postives = 91/127 (71.65%), Query Frame = 3
Query:   99 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHG 479
            L+  D E+HDL+  E +RQ  G+ELIASENF S AV+EA+GS LTNKY+EG P  RYYGG E++D+IE+L R RA Q F +       NVQP+SGS AN AAY ++ EP D +MG+ L  GGHLTHG
Sbjct:    5 LKVTDSEVHDLLIGELKRQEYGLELIASENFASVAVMEAMGSILTNKYAEGYPAKRYYGGCEWVDKIEDLARERAKQLFKVK----YANVQPHSGSQANMAAYLSIAEPGDVLMGMSLSHGGHLTHG 127          
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYA_CAMJR (Serine hydroxymethyltransferase OS=Campylobacter jejuni (strain RM1221) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.981e-34
Identity = 75/137 (54.74%), Postives = 89/137 (64.96%), Query Frame = 3
Query:   96 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKI 506
            SLE  D EI DL  KE  RQC G+E+IASENFT   V+E +GS LTNKY+EG PG RYYGG EF+DEIE L   R  + F+        NVQP SGS AN   Y A++ P D+I+G+DL  GGHLTHG   S   K+
Sbjct:    2 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCK----FANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKM 134          
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYA_CAMJJ (Serine hydroxymethyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.981e-34
Identity = 75/137 (54.74%), Postives = 89/137 (64.96%), Query Frame = 3
Query:   96 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKI 506
            SLE  D EI DL  KE  RQC G+E+IASENFT   V+E +GS LTNKY+EG PG RYYGG EF+DEIE L   R  + F+        NVQP SGS AN   Y A++ P D+I+G+DL  GGHLTHG   S   K+
Sbjct:    2 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIQRCKKLFNCK----FANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKM 134          
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYA_CAMJE (Serine hydroxymethyltransferase OS=Campylobacter jejuni GN=glyA PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 9.981e-34
Identity = 75/137 (54.74%), Postives = 89/137 (64.96%), Query Frame = 3
Query:   96 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKI 506
            SLE  D EI DL  KE  RQC G+E+IASENFT   V+E +GS LTNKY+EG PG RYYGG EF+DEIE L   R  + F+        NVQP SGS AN   Y A++ P D+I+G+DL  GGHLTHG   S   K+
Sbjct:    2 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCK----FANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKM 134          
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYA_CAMJD (Serine hydroxymethyltransferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.981e-34
Identity = 75/137 (54.74%), Postives = 89/137 (64.96%), Query Frame = 3
Query:   96 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKI 506
            SLE  D EI DL  KE  RQC G+E+IASENFT   V+E +GS LTNKY+EG PG RYYGG EF+DEIE L   R  + F+        NVQP SGS AN   Y A++ P D+I+G+DL  GGHLTHG   S   K+
Sbjct:    2 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCK----FANVQPNSGSQANQGVYAALINPGDKILGMDLTHGGHLTHGAKVSSSGKM 134          
BLAST of EY675147 vs. ExPASy Swiss-Prot
Match: GLYA_CAMJ8 (Serine hydroxymethyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.981e-34
Identity = 75/137 (54.74%), Postives = 89/137 (64.96%), Query Frame = 3
Query:   96 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKI 506
            SLE  D EI DL  KE  RQC G+E+IASENFT   V+E +GS LTNKY+EG PG RYYGG EF+DEIE L   R  + F+        NVQP SGS AN   Y A++ P D+I+G+DL  GGHLTHG   S   K+
Sbjct:    2 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVIGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCK----FANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKM 134          
The following BLAST results are available for this feature:
BLAST of EY675147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_CLOB15.851e-3455.81Serine hydroxymethyltransferase OS=Clostridium bot... [more]
GLYA_SOLUE7.642e-3458.91Serine hydroxymethyltransferase OS=Solibacter usit... [more]
GLYA_DESRM7.642e-3458.46Serine hydroxymethyltransferase OS=Desulfotomaculu... [more]
GLYA_ACIBL7.642e-3455.73Serine hydroxymethyltransferase OS=Acidobacteria b... [more]
GLYA_THELT9.981e-3457.48Serine hydroxymethyltransferase OS=Thermotoga lett... [more]
GLYA_CAMJR9.981e-3454.74Serine hydroxymethyltransferase OS=Campylobacter j... [more]
GLYA_CAMJJ9.981e-3454.74Serine hydroxymethyltransferase OS=Campylobacter j... [more]
GLYA_CAMJE9.981e-3454.74Serine hydroxymethyltransferase OS=Campylobacter j... [more]
GLYA_CAMJD9.981e-3454.74Serine hydroxymethyltransferase OS=Campylobacter j... [more]
GLYA_CAMJ89.981e-3454.74Serine hydroxymethyltransferase OS=Campylobacter j... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-F12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675147 ID=EY675147; Name=EY675147; organism=Citrus sinensis; type=EST; length=1033bp
CCACGCGTCCGCATTTTCCCTTTTTTTCGTTTTCAGTGAATCCAGAAAAC
GGAAAAAAAGAAAAAATGGATCCAGTGAACGAGTGGGGCAACTCATCTCT
TGAAACCGTGGACCCAGAAATTCACGACCTGATCGAGAAAGAGAAGCGCC
GACAATGCCGCGGCATCGAGCTCATCGCCTCCGAGAACTTCACCTCCTTC
GCCGTTATCGAAGCCCTCGGCAGCGCCCTCACCAACAAATACTCAGAGGG
AATGCCCGGCAACCGTTACTACGGAGGCAACGAATTCATCGACGAGATCG
AGAATCTCTGCCGGTCGAGAGCTTTACAAACTTTCCATTTGGACCCCACC
CAGTGGGGTGTCAACGTTCAGCCTTACTCCGGCTCGCCGGCCAACTTCGC
CGCTTACACGGCGGTGCTCGAGCCTCATGACCGTATCATGGGGCTGGACT
TGCCGTCCGGAGGGCATTTGACTCATGGGTATTACACTTCTGGCGGGAAA
AAAATATCGGGCGAACTTCGATTTACTTCGAGAGCTTGCCGTACAAGGTG
GAATTCCAAATACTGGGTATATTGATTACAATAAGTTGGGAGGAAAAAAG
GCGTTGGAAATTTTTAGGCCAAAAGTTGATTATTTTGCGGGGGGGAGGGG
GTTTCCCAAGGGATGGGGAATATGGCTAATTTCAAAGCCGTTGGCTAATA
AAAGGGGGGGGCCCCTTTTGCCCGAGGGAAAAGGGGGCAAAAAGACAAGG
GGCTTGGGTGGGGGCCCAAGGAAGACAGGAAAACCCCTTTTGAATAAAAG
GTACATTAAGATCACAACCCCCGATACTCTCAAAAAAACATGGGGGGGGG
GCCCATCAGGGGCGAGGGGAGGAGTATTTTTTCACCCAGGAAAGGGGGGC
CAAAAAACACAAAGGACCAAAAGAGGGGGAGAGAAACACAAAAAGAGGGG
GGGGGGGAGAATCATAAAAAGGTGTCTGTAAAACATAAAACAGACTAAGT
ACTAGCATGAGCGTTTGAATGATGAGAATACTA
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