EY675137

Overview
NameEY675137
Unique NameEY675137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.451e-13
Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 1
Query:  151 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKF-TYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGYSVVILILKPMNRRFSCYSS 531
            S++YA VARG VVLAE +  S N ++IA Q L+K+P + +   +Y+ D + F+    +G T   +ADE +GR+IP +FLE +   FV  YG     +A A  +N EF         + +N++   YS+
Sbjct:    2 SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRA-IHSAQAYAMNDEFS--------RVLNQQIEYYSN 120          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 38/108 (35.19%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  151 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPA--SNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEF 468
            +++YA VARG VVLAE++  +GN  ++  + L+KL    S+ +  ++ D + F+ L  +G T+  +A+++ GR++P ++LE +   F+  Y G  A  APA  +N EF
Sbjct:    2 AIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNY-GKVAHNAPAYAMNDEF 108          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.605e-12
Identity = 41/116 (35.34%), Postives = 63/116 (54.31%), Query Frame = 1
Query:  151 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGYSVVILILK 498
            ++++A VARG  +LA++    GNF  +  Q L K+P+ NNK TY+   + F+Y+  +   Y  + D+   R    +FL  VK  F + Y G +A TA    +N EF  SV+   LK
Sbjct:    2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTY-GSRAQTALPYAMNSEFS-SVLAAQLK 115          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.096e-12
Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = 1
Query:  151 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGYSVVILILK 498
            ++++A VARG  +LA++    GNF  +  Q L K+P+ NNK TY+   + F+Y+  +   Y  + D+   R     FL  VK  F + Y G +A TA    +N EF  SV+   LK
Sbjct:    2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTY-GSRAQTALPYAMNSEFS-SVLAAQLK 115          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 4.669e-12
Identity = 40/116 (34.48%), Postives = 62/116 (53.45%), Query Frame = 1
Query:  151 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGYSVVILILK 498
            ++++A VARG  +LA++    GNF  +  Q L K+P+ NNK TY+   + F+Y+  +   Y  + D+   R     FL  +K  F + Y G +A TA    +N EF  SV+   LK
Sbjct:    2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFS-SVLAAQLK 115          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.669e-12
Identity = 40/116 (34.48%), Postives = 62/116 (53.45%), Query Frame = 1
Query:  151 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGYSVVILILK 498
            ++++A VARG  +LA++    GNF  +  Q L K+P+ NNK TY+   + F+Y+  +   Y  + D+   R     FL  +K  F + Y G +A TA    +N EF  SV+   LK
Sbjct:    2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFS-SVLAAQLK 115          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.097e-12
Identity = 40/116 (34.48%), Postives = 62/116 (53.45%), Query Frame = 1
Query:  151 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGYSVVILILK 498
            ++++A VARG  +LA++    GNF  +  Q L K+P+ NNK TY+   + F+Y+  +   Y  + D+   R     FL  +K  F + Y G +A TA    +N EF  SV+   LK
Sbjct:    2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFS-SVLAAQLK 115          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 1.040e-11
Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = 1
Query:  151 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGYSVVILILK 498
            ++++A VARG  +LA++    GNF  +  Q L K+P+ NNK TY    + F+Y+  +   Y  + D+   R     FL  +K  F + Y G +A TA    +N EF  SV+   LK
Sbjct:    2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFS-SVLAAQLK 115          
The following BLAST results are available for this feature:
BLAST of EY675137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
VA712_ARATH1.451e-1336.72Vesicle-associated membrane protein 712 OS=Arabido... [more]
VA714_ARATH1.229e-1235.19Vesicle-associated membrane protein 714 OS=Arabido... [more]
VAMP7_MOUSE1.605e-1235.34Vesicle-associated membrane protein 7 OS=Mus muscu... [more]
VAMP7_RAT2.096e-1235.34Vesicle-associated membrane protein 7 OS=Rattus no... [more]
VAMP7_HUMAN4.669e-1234.48Vesicle-associated membrane protein 7 OS=Homo sapi... [more]
VAMP7_BOVIN4.669e-1234.48Vesicle-associated membrane protein 7 OS=Bos tauru... [more]
VAMP7_CHICK6.097e-1234.48Vesicle-associated membrane protein 7 OS=Gallus ga... [more]
VAMP7_PONAB1.040e-1134.48Vesicle-associated membrane protein 7 OS=Pongo abe... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-E12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675137 ID=EY675137; Name=EY675137; organism=Citrus sinensis; type=EST; length=1003bp
CGCGTAAAAAAGCAAAGCATAGCAACAAACAAAATTGGAGAGGAGAGAGA
GACCTCTTGGAGCTTTAAAACAAAATAAAAAATAAAAACAAGCCCAGATC
TCATCTCATCTCAACTCGACTCAATTAGTCTCATCAAAATGAGCCAGAAA
TCGCTGATCTACGCCTTCGTGGCGCGCGGAAATGTTGTGCTTGCTGAGTA
CACTGAGTTCAGTGGCAATTTCAACTCCATAGCCTATCAGTGCCTCCAGA
AACTCCCTGCTTCCAACAACAAGTTCACTTACAACTGTGATGCTCACACC
TTCAATTATCTCGTCGATAATGGTTACACATATTGTGTGGTCGCAGATGA
ATCGTCCGGAAGACAAATACCGATGGCTTTTCTGGAGCGCGTCAAGGATG
AATTTGTTTCCAAATATGGGGGTGGAAAGGCTGCCACGGCTCCTGCCAAT
GGCCTGAACAAGGAATTTGGGTATTCTGTTGTGATTCTGATATTAAAGCC
CATGAACAGACGATTTTCTTGTTACTCTAGTTTGCTTAATATATTAAACT
TTGCAGACCAAAATTGAAAGAACTAATGCAGTACTGTGTTGAATCTCTGG
AGGAAAACAGCAAGCTTGGGAAGGGTAAAGGCTCAGGTTTCAGAAGTCAA
AGGGGGTAAGAAGGGAAAAAATTGAAAAGGGTTTAAAAAAGGGGGGAAAA
AAATGGGGCTACGGGGGCAAAAAAAACGGAAAAACCTTCATCCCCAGGGG
AACAAAATTTTCGGAAAAACGGGGGAACAAAAAGGGGGGGGAAAAAGGGG
GGGTGGCCAAAAAAAGAAAGAAAAACAGCGAAGATGGGTTTGGGGGAAAA
AGGAGGTGGGGCCGGGGACCCCCACCGCAAAAGCCCCCCCCGCGGTTGTG
GCGGGGGGGGTCTCAGAGGGGGGGGGGAAAAAAGGGGGGGGGCTGTTATT
CCCCCAGGGGGGGGGGTGTTTATATAATATTACACCCCCCTCTTTTCTAA
GAA
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