EY675133

Overview
NameEY675133
Unique NameEY675133
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1093
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675133 vs. ExPASy Swiss-Prot
Match: MCFR_DICDI (Mitochondrial substrate carrier family protein R OS=Dictyostelium discoideum GN=mcfR PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.169e-11
Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = 3 
Query:  279 SSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKNGRLSHPYKGISDCFARTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLF-NFKKDRDGLLKSGLLG 611
            +S +V  L GGVS  ++K+  AP+ERVK+L Q + +M       + +  +       +K+EG+  LW+GNTA ++R FP  A+ +   DY K  F   KK    +  +G LG
Sbjct:    9 TSPMVTLLAGGVSGVIAKSTIAPLERVKILYQVKSKM-------YSFNSVYGLMKNIIKNEGLAGLWKGNTATILRIFPYSAIQWTSYDYLKNNFVTDKKSSVQIFIAGSLG 113
The following BLAST results are available for this feature:
BLAST of EY675133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
MCFR_DICDI1.169e-1134.82Mitochondrial substrate carrier family protein R O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-E07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675133 ID=EY675133; Name=EY675133; organism=Citrus sinensis; type=EST; length=1093bp
CCCACGCGTCCGCACCACGCGACCTTCTCAGGTCACCATCTTCAGCTGCA
AACATGGCAGATGGATCGTATCCATCCGTATTTCAGAAAATGCAAGGCCA
GTCATACTTCATTTCTGGGGTCTCCCCCAATTTGTATGCCCACAACTACA
GTGTGGCAGGTTCCTTTGTTAATAGAGGATCACAGAATTCTTTTTGGGCA
GCAAGTCAGGGAACTGGCCTGGCACTTGTGTCTCCTGTTTCTCCTATATT
CGTACAAGCTCCATCAGAAAAAAGTCTTTCTTCTTTTTTGGTGGATTTTC
TTATGGGAGGAGTTTCAGCAGCTGTTTCCAAGACTGCAGCTGCTCCTATT
GAGCGGGTTAAGCTTTTGATTCAGAATCAAGATGAGATGATCAAGAATGG
TCGGCTCTCGCATCCGTACAAGGGGATTTCTGATTGCTTTGCTAGAACTG
TTAAGGATGAAGGCATACTATCTCTTTGGAGAGGCAACACTGCCAATGTT
ATCAGATACTTCCCTACCCAGGCCCTGAACTTTGCATTCAAGGATTACTT
TAAAAGGCTGTTTAACTTCAAAAAAGACAGAGATGGGCTACTGAAAAGTG
GTTTGCTGGGAACTTGGCATCTGGTGGGGGCTGCTGGGGCTTCATCGCCT
CTTTTTGGGGATTCCCCTTGGACTATGCAAAAAAACGTTTGGCAAATGAA
TGCTAAGGGAGCCTAAAAAGGGGGGGGGAAAAGGGATTTTAATGGGTTGG
ATTTGATTTTCTACAAAAAAAAACCCCGAAAACCGGAAGGGGTTTGCTGG
GGCCCCACCCCGGGGAATCTCCCCTCCCCATGGGGTTGGAAATTTAAAAG
GGGAAACGGGGGGGCCCCCCTTTTTGAAAAGAGTATAAATTTCCCCAAAA
AACCCGGGGGGGGGTTGAACCGAAGGGGGGGAGGGAAGGAAAATTTTTTT
TTTTGGGGCATTCCCTTTTTTTTATTTTGGGGGGGGGGGGGGAAAAAAAA
ACAAAATGTGTGGGGGGGGCGGGGGGTGGTTGTGTGGGCTCTTCTTTTTC
ACCCCCCAACACAAAATATATAATAATAAAAAAAACAAAGGAA
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