EY675132

Overview
NameEY675132
Unique NameEY675132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_GEOKA (Serine hydroxymethyltransferase OS=Geobacillus kaustophilus GN=glyA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.557e-42
Identity = 109/249 (43.78%), Postives = 143/249 (57.43%), Query Frame = 2
Query:  110 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            DP++   IE+E++RQ   IELIASENF S AV+EA GS LTNKY+EG PG RYYGG E++D +E+L R RA Q F  +     VNVQP+SG+ AN A Y  VLE  D ++G++L  GGHLTH      G  ++ + I    + Y V+  T  IDY+ + EKA   R KLI+ G SA PR  ++AKF+  A++ G        +  MA +AG      L+  G   P P         T  K   GPRGG
Sbjct:    8 DPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEDLARERAKQLFGAE----HVNVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTH------GSPVNFSGIQYNFVEYGVDPETHVIDYDDVREKARLHRPKLIVAGASAYPRIIDFAKFREIADEVGAYL-----MVDMAHIAG------LVAAGVH-PNPVPYAHFVTTTTHKTLRGPRGG 234          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_SYNJA (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain JA-3-3Ab) GN=glyA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 9.869e-42
Identity = 110/253 (43.48%), Postives = 144/253 (56.92%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            L   DP ++ LI++E  RQ   +E+IASENFTS AV+ A GS LTNKY+EG+PG RYYGG EFIDEIE L   RA Q F         NVQP+SG+ ANFA + A+L+P D IMG+DL  GGHLTH      G  ++ +      + Y V+  T  ID++++ + A   R KLIICG SA PR  ++A F+  A++ G        +  +A +AG      L+ TG   P P         T  K   GPRGG
Sbjct:   11 LAETDPVVYRLIQQELNRQRDHLEMIASENFTSPAVLAAQGSVLTNKYAEGLPGKRYYGGCEFIDEIEQLAIDRAKQLFGAA----HANVQPHSGAQANFAVFLALLQPGDTIMGMDLAHGGHLTH------GSPVNVSGKWFRVVHYGVDPQTERIDFDQVRDLARQHRPKLIICGYSAYPRIIDFAAFRAIADEVGAYL-----MADIAHIAG------LVATGHH-PNPVPICDVVTTTTHKTLRGPRGG 241          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_GEOTN (Serine hydroxymethyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glyA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 9.869e-42
Identity = 106/249 (42.57%), Postives = 143/249 (57.43%), Query Frame = 2
Query:  110 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            DP++   IE+E++RQ   IELIASENF S AV+EA GS +TNKY+EG PG RYYGG E++D +E+L R RA Q F  +      NVQP+SG+ AN A Y  VL+P D ++G++L  GGHLTH      G  ++ + +    + Y V+  T  IDY+ + EKA   R KLI+ G SA PR  ++AKF+  A++ G        +  MA +AG      L+  G   P P         T  K   GPRGG
Sbjct:    8 DPQVFATIEQERKRQHAKIELIASENFVSRAVMEAQGSVMTNKYAEGYPGRRYYGGCEYVDVVEDLARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLKPGDTVLGMNLSHGGHLTH------GSPVNFSGVQYNFVEYGVDPETHVIDYDDVREKARLHRPKLIVAGASAYPRVIDFAKFREIADEVGAYL-----MVDMAHIAG------LVAAGLH-PNPVPYAHFVTTTTHKTLRGPRGG 234          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_DESRM (Serine hydroxymethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=glyA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 9.869e-42
Identity = 112/255 (43.92%), Postives = 141/255 (55.29%), Query Frame = 2
Query:   89 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTG-PQIPQP------PTPKKLGGGPRGG 832
            N  L   DPE+   IE E +RQ R IELIASENF S AV+EA GS LTNKY+EG PG RYYGG EF+D  E+L  SRA + F  D      NVQP+SG+ ANFA Y A+L+P D+I+G++L  GGHLTH      G  ++ +      + Y V   TG I+Y KL E AL  + K+I+ G SA  R  ++ K    A++    F        MA +AG      L+  G  Q P P       T  K   GPRGG
Sbjct:    3 NGKLAQTDPELAKAIELEHQRQQRNIELIASENFVSPAVLEAQGSILTNKYAEGYPGKRYYGGCEFVDIAESLAISRAKKLFGAD----HANVQPHSGAQANFAVYFALLQPGDKILGMNLAHGGHLTH------GSPVNVSGKYFNVVAYGVEEDTGCINYEKLREIALQEKPKMIVAGASAYARAIDFKKIGEIAKEIDAYF-----FVDMAHIAG------LVAAGLHQSPVPYADVVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_THEFY (Serine hydroxymethyltransferase OS=Thermobifida fusca (strain YX) GN=glyA PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.289e-41
Identity = 105/250 (42.00%), Postives = 142/250 (56.80%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            SL  +DPE+   ++ E  RQ   +E+IASENF   AV+EA G+ LTNKY+EG PG RYYGG E +D IE L   RA   F  +      NVQP+SG+ AN A Y A+L+P D I+GLDL  GGHLTH      G +I+ +  +L ++ Y V  S G IDY+++E  A + + KLII G SA PR+ ++A+F+  A++ G       A   GL +      P     ++ T        T  K  GGPRGG
Sbjct:   11 SLAQLDPEVAAAVDAELARQRDTLEMIASENFAPRAVLEAQGTVLTNKYAEGYPGRRYYGGCEHVDVIEQLAIDRAKALFGAE----HANVQPHSGAQANTAVYFALLQPGDTILGLDLAHGGHLTH------GMRINYSGKILNAVAYHVRESDGLIDYDEVEALAKEHQPKLIIAGWSAYPRQLDFARFREIADQTGALLMVDMAHFAGLVAAGLHPNPVPYADVVTT--------TTHKTLGGPRGG 242          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CYAP7 (Serine hydroxymethyltransferase OS=Cyanothece sp. (strain PCC 7424) GN=glyA PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.289e-41
Identity = 110/249 (44.18%), Postives = 143/249 (57.43%), Query Frame = 2
Query:  110 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            DP I ++I++E +RQ   +ELIASENFTS AV+ A GS LTNKY+EG+P  RYYGG E+ID++E L   RA Q F         NVQP+SG+ ANFA + A+LEP D IMG+DL  GGHLTH      G  ++ +      + Y VN  T  +DY+ + E AL  + KLIICG SA PR  ++ KF+  A++ G        L  +A +AG      L+ TG   P P         T  K   GPRGG
Sbjct:   13 DPAIAEMIQQELQRQRDHLELIASENFTSAAVLAAQGSVLTNKYAEGLPKKRYYGGCEYIDKVEQLAIDRAKQLFGAA----HANVQPHSGAQANFAVFLALLEPGDTIMGMDLSHGGHLTH------GSPVNVSGKWFRVVNYGVNRETEQLDYDLIREIALKEQPKLIICGYSAYPRIIQFDKFRAIADEVGAYL-----LADIAHIAG------LVATGHH-PSPIPHCHVVTTTTHKTLRGPRGG 239          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_SYNPX (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain WH8102) GN=glyA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.683e-41
Identity = 110/256 (42.97%), Postives = 142/256 (55.47%), Query Frame = 2
Query:   89 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            N  L   DP I  LIEKE++RQ   +ELIASENF S AV++A GS LTNKY+EG+P  RYYGG E +D IE L   RA + F      W  NVQP+SG+ ANFA + A+L+P D IMGLDL  GGHLTH      G  ++ +      + Y V+  T  +D   + + AL+ + KLI+CG SA PR  ++A F+  A++ G        L  MA +AG      L+  G   P P         T  K   GPRGG
Sbjct:   10 NKGLAAADPAIAALIEKEQQRQETHLELIASENFASRAVMDAQGSVLTNKYAEGLPSKRYYGGCEHVDAIEELAIERAKELF---GAAW-ANVQPHSGAQANFAVFLALLQPGDTIMGLDLSHGGHLTH------GSPVNVSGKWFNVVQYGVDRETQRLDMEAIRQLALEHKPKLIVCGFSAYPRTIDFAAFRAIADEVG-----AFLLADMAHIAG------LVAAGVH-PSPVPHCDVVTTTTHKTLRGPRGG 243          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_PROMA (Serine hydroxymethyltransferase OS=Prochlorococcus marinus GN=glyA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.683e-41
Identity = 107/249 (42.97%), Postives = 142/249 (57.03%), Query Frame = 2
Query:   89 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIP-QPPTPKKLGGGPRGG 832
            NS L   DP+I  LI +E  RQ   +ELIASENF S AV+EA GS LTNKY+EG+P  RYYGG E ID IE L  +RA   F+    +W  NVQP+SG+ ANFA + A+L P D IMG+DL  GGHLTH      G  ++ +     ++ Y V+ +T  +++ ++ + AL  R KLIICG SA PR  ++  F++ A++          L  +A +AG   C    N  P       T  K   GPRGG
Sbjct:    5 NSDLRNTDPDISFLINQELLRQQTHLELIASENFASEAVMEAQGSVLTNKYAEGLPNKRYYGGCEHIDAIEQLAITRAQTLFN---AEW-ANVQPHSGAQANFAVFLALLNPGDTIMGMDLSHGGHLTH------GSPVNVSGKWFNAIHYGVDQTTKVLNFEQIRQVALKNRPKLIICGFSAYPRTIDFKAFRSIADEIDAYL-----LADIAHIAGLVACGAHPNPVPYCDVVTTTTHKTLRGPRGG 238          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_MYCA5 (Serine hydroxymethyltransferase OS=Mycoplasma arthritidis (strain 158L3-1) GN=glyA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.683e-41
Identity = 97/201 (48.26%), Postives = 127/201 (63.18%), Query Frame = 2
Query:   89 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWG 691
            N  +   D +I DLI KE  RQ   IELIASEN+ S  V++A GS+LTNKY EG PG RYYGG EF+DEIE + + RA + F+        NVQPYSGS AN A Y A+L P D ++GL L SGGHLTHGY      +IS + I  +S  Y VN   G +DY+++ + A + + K+IICG SA  +  ++AKF+  A+  G
Sbjct:    2 NKKVTLHDQDIADLINKESHRQEEHIELIASENYVSEDVMKAAGSSLTNKYGEGYPGKRYYGGCEFVDEIEKIAQERACKLFNAK----YANVQPYSGSVANAAIYMALLNPGDSVLGLSLDSGGHLTHGY------RISFSGIFYKSYTYTVNQD-GVLDYDEILKIAQEVKPKMIICGYSAYSQIVDFAKFREIADAVG 191          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_LEGPH (Serine hydroxymethyltransferase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=glyA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.683e-41
Identity = 111/250 (44.40%), Postives = 139/250 (55.60%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWG----GPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            S++  D  +   I  EKRRQ   IELIASEN+ S  V+EA GS LTNKY+EG PG RYYGG EF+D  E L  SRA   F        VNVQP+SGS AN A   A+L P D  MG+ LP GGHLTH      G K++ +  L  S+ Y V+S+TG IDY+ LE+ AL  + KLII G SA  R  ++A+F+  A+K G       A   GL ++     P     ++ T        T  K   GPRGG
Sbjct:    7 SIKNFDDVLFKAISDEKRRQEEHIELIASENYVSPRVLEAQGSVLTNKYAEGYPGKRYYGGCEFVDVAEELAISRAKLLFGAH----YVNVQPHSGSQANAAVMMALLSPGDTFMGMALPHGGHLTH------GSKVNFSGKLYHSVEYGVDSNTGLIDYDALEKLALQHKPKLIIAGFSAYSRILDWARFREIADKVGAYLMADIAHVAGLVAVGLYPSPVPYADVVTT--------TTHKTLRGPRGG 238          
The following BLAST results are available for this feature:
BLAST of EY675132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_GEOKA7.557e-4243.78Serine hydroxymethyltransferase OS=Geobacillus kau... [more]
GLYA_SYNJA9.869e-4243.48Serine hydroxymethyltransferase OS=Synechococcus s... [more]
GLYA_GEOTN9.869e-4242.57Serine hydroxymethyltransferase OS=Geobacillus the... [more]
GLYA_DESRM9.869e-4243.92Serine hydroxymethyltransferase OS=Desulfotomaculu... [more]
GLYA_THEFY1.289e-4142.00Serine hydroxymethyltransferase OS=Thermobifida fu... [more]
GLYA_CYAP71.289e-4144.18Serine hydroxymethyltransferase OS=Cyanothece sp. ... [more]
GLYA_SYNPX1.683e-4142.97Serine hydroxymethyltransferase OS=Synechococcus s... [more]
GLYA_PROMA1.683e-4142.97Serine hydroxymethyltransferase OS=Prochlorococcus... [more]
GLYA_MYCA51.683e-4148.26Serine hydroxymethyltransferase OS=Mycoplasma arth... [more]
GLYA_LEGPH1.683e-4144.40Serine hydroxymethyltransferase OS=Legionella pneu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-E06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675132 ID=EY675132; Name=EY675132; organism=Citrus sinensis; type=EST; length=1026bp
CACGCGTCCGCATTTTCCCTTTTTTTCCTTTTCAGTGAATCCAGAAAACG
GAAAAAAAGAAAAAATGGATCCAGTGAACGAGTGGGGCAACTCATCTCTT
GAAACCGTGGACCCAGAAATTCACGACCTGATCGAGAAAGAGAAGCGCCG
ACAATGCCGCGGCATCGAGCTCATCGCCTCCGAGAACTTCACCTCCTTCG
CCGTTATCGAAGCCCTCGGCAGCGCCCTCACCAACAAATACTCAGAGGGA
ATGCCCGGCAACCGTTACTACGGAGGCAACGAATTCATCGACGAGATCGA
GAATCTCTGCCGGTCGAGAGCTTTACAAACTTTCCATTTGGACCCCACCC
AGTGGGGTGTCAACGTTCAGCCTTACTCCGGCTCGCCGGCCAACTTCGCC
GCTTACACGGCGGTGCTCGAGCCTCATGACCGTATCATGGGGCTGGACTT
GCCGTCCGGAGGGCATTTGACTCATGGGTATTACACTTCTGGCGGGAAAA
AGATATCGGCGACTTCGATTTTACTCGAGAGCTTGCCGTACAAGGTGAAT
TCGAGTACTGGGTATATTGATTACAATAAGTTGGAGGAGAAAGCGTTGGA
TTTTAGGGCGAAGTTGATCATTTGCGGGGGGAGTGCGTAACCAAGGGAAT
GGGAATATGCCAAATTCCAAACTGGTGCTGAAAAGTGGGGGGGCCCTTTT
GCTCGGGGGATAGGGCTCAAATCAATGGCCTTTGTTGCTGGCCCAGGAAA
CTGCCAACCCCTTTTGAATACTGGTCCCCAAATCCCCCAACCCCCAACCC
CAAAAAAACTTGGGGGGGGCCCCAGGGGGGGGGATAGATTTCTTCCACCG
GGAAAGGGGCCCCTAAACACCCCCCAAAAAAAGGGGCCCAACCCAAAGGG
GGGGGGCGGGTTTTTATACTTTTTAAAAAAAAAAAAAAAATAAATTTTTT
TTTGGTTGTTTCCTCCCCCCCCCCCCCCCCTCTTCAGGAGGGGGGGGGTG
CCTCCTCCCCCACACACACCCCCCAC
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