EY675132

Overview
NameEY675132
Unique NameEY675132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_LEGPA (Serine hydroxymethyltransferase OS=Legionella pneumophila (strain Paris) GN=glyA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.683e-41
Identity = 111/250 (44.40%), Postives = 139/250 (55.60%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWG----GPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            S++  D  +   I  EKRRQ   IELIASEN+ S  V+EA GS LTNKY+EG PG RYYGG EF+D  E L  SRA   F        VNVQP+SGS AN A   A+L P D  MG+ LP GGHLTH      G K++ +  L  S+ Y V+S+TG IDY+ LE+ AL  + KLII G SA  R  ++A+F+  A+K G       A   GL ++     P     ++ T        T  K   GPRGG
Sbjct:    7 SIKNFDDVLFKAISDEKRRQEEHIELIASENYVSPRVLEAQGSVLTNKYAEGYPGKRYYGGCEFVDVAEELAISRAKLLFGAH----YVNVQPHSGSQANAAVMMALLSPGDTFMGMALPHGGHLTH------GSKVNFSGKLYHSVEYGVDSNTGLIDYDALEKLALQHKPKLIIAGFSAYSRILDWARFREIADKVGAYLMADIAHVAGLVAVGLYPSPVPYADVVTT--------TTHKTLRGPRGG 238          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_DESAP (Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=glyA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.683e-41
Identity = 111/255 (43.53%), Postives = 141/255 (55.29%), Query Frame = 2
Query:   89 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPP-------TPKKLGGGPRGG 832
            N SL   DPEI   I  E  RQ   +ELIASENF S AV+EA GS LTNKY+EG PG RYYGG E++D +E++   RA + F         NVQP+SG+ AN AAY A LEP D IMG+ L  GGHLTH      G KI+ +      +PY V   TG IDY+++   A + R KLI+ G SA PRE ++A+ +  A+  G      + +  MA +AG      L+  G  +   P       T  K   GPRGG
Sbjct:    4 NRSLAETDPEIARAIALEITRQGAKLELIASENFVSRAVLEAQGSVLTNKYAEGYPGARYYGGCEYVDIVESVAIRRAKEIFGAG----HANVQPHSGAQANMAAYFAFLEPGDTIMGMRLAHGGHLTH------GAKINFSGRYFRYVPYGVEEETGRIDYDRMHAIAREHRPKLIVGGASAYPRELDFARMRAIADDVG-----ALLMIDMAHIAG------LIAAGLHMSPVPYADVVTTTTHKTLRGPRGG 237          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CAMFF (Serine hydroxymethyltransferase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=glyA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.683e-41
Identity = 109/248 (43.95%), Postives = 141/248 (56.85%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGP--QIPQPPTPKKLGGGPRGG 832
            SLE+ D +I+ L+ KE  RQC  +E+IASENFT   V+E +GS LTNKY+EG P  RYYGG EF+DEIE +   R  + F  +      NVQP SGS AN   Y A L+P D+I+G+DL  GGHLTH      G K+S++    ES  Y V    G I+YNK+EE A   + K+I+CG SA  RE ++ KF+  A+  G      +   +   VAG  N     N  P   +    T K L  GPRGG
Sbjct:    2 SLESFDKDIYSLVNKELERQCDHLEMIASENFTYPDVMEVMGSVLTNKYAEGYPSKRYYGGCEFVDEIEQIAIDRCKKLFGCE----FANVQPNSGSQANQGVYGAFLKPGDKILGMDLSHGGHLTH------GSKVSSSGKNYESFFYGVELD-GRINYNKVEEIANITKPKMIVCGASAYAREIDFKKFREIADSVGAYLFADVAHIAGLVVAGEHN-----NPFPHCHVVSSTTHKTL-RGPRGG 232          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_ANAVT (Serine hydroxymethyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glyA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.683e-41
Identity = 110/253 (43.48%), Postives = 144/253 (56.92%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            L   DP I  LI +E +RQ   +ELIASENFTS AV+ A GS LTNKY+EG+PG RYYGG EFID+IE +   RA Q F         NVQP+SG+ ANFA +  +L P D+IMG+DL  GGHLTH      G  ++ +    +   Y V+  T  +DY+++ E AL  R KL+ICG SA PR  ++ KF++ A++ G        L  +A +AG      L+ +G   P P         T  K   GPRGG
Sbjct:    9 LTNSDPAIAGLINQELQRQRDHLELIASENFTSAAVLAAQGSVLTNKYAEGLPGKRYYGGCEFIDKIEQIAIDRAKQLFGAA----HANVQPHSGAQANFAVFLTLLAPGDKIMGMDLSHGGHLTH------GSPVNVSGKWFQVCHYGVSQQTEQLDYDQIRELALRERPKLLICGYSAYPRIIDFEKFRSIADEVGAYL-----LADIAHIAG------LVASGLH-PDPIPYCHVVTTTTHKTLRGPRGG 239          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_DESHY (Serine hydroxymethyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=glyA PE=3 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 2.199e-41
Identity = 107/263 (40.68%), Postives = 152/263 (57.79%), Query Frame = 2
Query:   65 MDPVNEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTG-PQIPQP------PTPKKLGGGPRGG 832
            MD + EW    +   DPE+ + I +E++RQ   IELIASENF S AV+ A GS LTNKY+EG PG RYYGG E++D +E+L R R  + F  +      NVQP+SG+ AN A Y A+L+P D ++G++L  GGHLTH      G  ++ + +    + Y V+ +T  IDY+ + + AL+ R KLI+ G SA PR+ ++A+ +  A++ G  F     +  MA +AG      L+  G  Q P P       T  K   GPRGG
Sbjct:    1 MDYIKEW----ILPQDPEVAEAIAQEEQRQRYKIELIASENFVSRAVMAAQGSVLTNKYAEGYPGKRYYGGCEYVDIVEDLARERVKKLFGAE----HANVQPHSGAQANTAVYFAMLKPGDTVLGMNLSHGGHLTH------GSPVNISGMYYNFVAYGVDQATERIDYDVVRQLALEHRPKLIVAGASAYPRQIDFARLREIADEAGSYF-----MVDMAHIAG------LVAAGLHQNPVPYAHFVTTTTHKTLRGPRGG 238          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CYAP4 (Serine hydroxymethyltransferase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=glyA PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.199e-41
Identity = 109/253 (43.08%), Postives = 142/253 (56.13%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            L   DP I  L+++E +RQ   +ELIASENFTS AV+ A GS LTNKY+EG+PG RYYGG E+ID++E L   RA   F         NVQP+SG+ ANFA + A+L+P D IMG+DL  GGHLTH      G  ++ +      + Y V+  T  +DY K+ + A   R KLIICG SA PR  ++ +F+  A++ G        L  MA +AG      L+ TG   P P         T  K   GPRGG
Sbjct:    9 LTETDPAIAGLLQQELQRQQDHLELIASENFTSAAVLAAQGSVLTNKYAEGLPGKRYYGGCEYIDKVEQLAIDRAKDLFQAA----HANVQPHSGAQANFAVFLALLQPGDTIMGMDLSHGGHLTH------GSPVNVSGKWFRVVHYGVDPVTEQLDYEKIRQLAHQHRPKLIICGYSAYPRIIQFDQFRAIADEVGAYL-----LADMAHIAG------LVATGHH-PSPIPVCDVVTTTTHKTLRGPRGG 239          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB8 (Serine hydroxymethyltransferase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=glyA PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.199e-41
Identity = 108/254 (42.52%), Postives = 144/254 (56.69%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            +++  D EI+DLIEKE  RQ +GIELIASEN  S AV+EA+GS LTNKY+EG P  RYYGG   +DEIE +   RA + F  +      NVQP+SGS AN A Y AVLEP D ++G+DL  GGHLTH      G  ++ +  L   + Y V+  T  IDY  + + A++ + KLI+ G SA  R  ++ KF+  A++ G      + +  MA +AG      L+  G   P P         T  K   GPRGG
Sbjct:    5 NIQREDKEIYDLIEKELVRQQKGIELIASENIVSPAVMEAMGSYLTNKYAEGYPNKRYYGGCHVVDEIEQIAIDRAKELFGAE----HANVQPHSGSQANMAVYFAVLEPGDTVLGMDLSHGGHLTH------GSPVNFSGKLFNFVSYGVDKETEMIDYENVRKLAIENKPKLIVAGASAYARILDFPKFREIADEVG-----ALLMVDMAHIAG------LVAAGVH-PSPVPYSDFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_BEII9 (Serine hydroxymethyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=glyA PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.199e-41
Identity = 113/265 (42.64%), Postives = 142/265 (53.58%), Query Frame = 2
Query:   47 NGKKEKMDPV-NEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAG--PGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            N K E   P  N +  ++L   DPEI   IE E  RQ   IELIASEN  S AV+EA GS +TNKY+EG PG RYYGG +F+D  ENL   R  + F         NVQP SGS AN A + A+L+P D  MGLDL +GGHLTH      G  ++ +    +++ Y V  S   ID + +E  A + + KLII GGSA PR W++A+F+  A+  G  F        MA  AG   G   P       +    T K L  GPRGG
Sbjct:    2 NAKVEVGQPAANSFFAANLADADPEIAKAIELELGRQRHEIELIASENIVSKAVLEAQGSIMTNKYAEGYPGKRYYGGCQFVDIAENLAIERVRKLFDCQ----FANVQPNSGSQANQAVFLALLQPGDVFMGLDLAAGGHLTH------GSPVNLSGKWFKAVSYGVRQSDHLIDMDAVEALAKEHKPKLIIAGGSAYPRHWDFARFRAIADSVGAYF-----FVDMAHFAGLVAGGAHPSPFPHAHVVTSTTHKTL-RGPRGG 250          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_BACSU (Serine hydroxymethyltransferase OS=Bacillus subtilis GN=glyA PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.199e-41
Identity = 103/246 (41.87%), Postives = 140/246 (56.91%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIP-QPPTPKKLGGGPRGG 832
            L   D ++ + I+ E+ RQ   IELIASENF S AV+EA GS LTNKY+EG PG RYYGG E +D +E++ R RA + F  +     VNVQP+SG+ AN A Y  +LE  D ++G++L  GGHLTH      G  ++ + +    + Y V+  T YIDY+ + EKAL  + KLI+ G SA PR  ++ KF+  A++ G  F     +  MA +AG        N  P       T  K   GPRGG
Sbjct:    4 LPAQDEQVFNAIKNERERQQTKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGGCEHVDVVEDIARDRAKEIFGAE----HVNVQPHSGAQANMAVYFTILEQGDTVLGMNLSHGGHLTH------GSPVNFSGVQYNFVEYGVDKETQYIDYDDVREKALAHKPKLIVAGASAYPRTIDFKKFREIADEVGAYF-----MVDMAHIAGLVAAGLHPNPVPYADFVTTTTHKTLRGPRGG 234          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_THENN (Serine hydroxymethyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=glyA PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.871e-41
Identity = 102/249 (40.96%), Postives = 142/249 (57.03%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            ++ VDPEI++++  E RRQ  G+ELIASENF S AVIE +GS LTNKY+EG PG RYYGG E++D  E L   RA + F  +      NVQP+SGS AN A Y A+ +P D IMG+ L  GGHLTH      G  ++ +  + + + Y VN  T  IDY+++ + AL+ R K+I+ GGSA  R  ++ +F+  A++ G       A   GL +      P     ++ +        T  K   GPRGG
Sbjct:    5 VKKVDPEIYEVLVNELRRQEYGLELIASENFASLAVIETMGSVLTNKYAEGYPGRRYYGGCEWVDRAEELAIERAKKLFGAE----FANVQPHSGSQANMAVYLALAQPGDTIMGMSLSHGGHLTH------GAPVNFSGRIFKVVHYGVNLETETIDYDEVRKLALEHRPKIIVAGGSAYARTIDFKRFREIADEVGAYLMVDMAHFAGLVAAGIHPNPVEYAHVVTS--------TTHKTLRGPRGG 235          
The following BLAST results are available for this feature:
BLAST of EY675132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_LEGPA1.683e-4144.40Serine hydroxymethyltransferase OS=Legionella pneu... [more]
GLYA_DESAP1.683e-4143.53Serine hydroxymethyltransferase OS=Desulforudis au... [more]
GLYA_CAMFF1.683e-4143.95Serine hydroxymethyltransferase OS=Campylobacter f... [more]
GLYA_ANAVT1.683e-4143.48Serine hydroxymethyltransferase OS=Anabaena variab... [more]
GLYA_DESHY2.199e-4140.68Serine hydroxymethyltransferase OS=Desulfitobacter... [more]
GLYA_CYAP42.199e-4143.08Serine hydroxymethyltransferase OS=Cyanothece sp. ... [more]
GLYA_CLOB82.199e-4142.52Serine hydroxymethyltransferase OS=Clostridium bei... [more]
GLYA_BEII92.199e-4142.64Serine hydroxymethyltransferase OS=Beijerinckia in... [more]
GLYA_BACSU2.199e-4141.87Serine hydroxymethyltransferase OS=Bacillus subtil... [more]
GLYA_THENN2.871e-4140.96Serine hydroxymethyltransferase OS=Thermotoga neap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-E06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675132 ID=EY675132; Name=EY675132; organism=Citrus sinensis; type=EST; length=1026bp
CACGCGTCCGCATTTTCCCTTTTTTTCCTTTTCAGTGAATCCAGAAAACG
GAAAAAAAGAAAAAATGGATCCAGTGAACGAGTGGGGCAACTCATCTCTT
GAAACCGTGGACCCAGAAATTCACGACCTGATCGAGAAAGAGAAGCGCCG
ACAATGCCGCGGCATCGAGCTCATCGCCTCCGAGAACTTCACCTCCTTCG
CCGTTATCGAAGCCCTCGGCAGCGCCCTCACCAACAAATACTCAGAGGGA
ATGCCCGGCAACCGTTACTACGGAGGCAACGAATTCATCGACGAGATCGA
GAATCTCTGCCGGTCGAGAGCTTTACAAACTTTCCATTTGGACCCCACCC
AGTGGGGTGTCAACGTTCAGCCTTACTCCGGCTCGCCGGCCAACTTCGCC
GCTTACACGGCGGTGCTCGAGCCTCATGACCGTATCATGGGGCTGGACTT
GCCGTCCGGAGGGCATTTGACTCATGGGTATTACACTTCTGGCGGGAAAA
AGATATCGGCGACTTCGATTTTACTCGAGAGCTTGCCGTACAAGGTGAAT
TCGAGTACTGGGTATATTGATTACAATAAGTTGGAGGAGAAAGCGTTGGA
TTTTAGGGCGAAGTTGATCATTTGCGGGGGGAGTGCGTAACCAAGGGAAT
GGGAATATGCCAAATTCCAAACTGGTGCTGAAAAGTGGGGGGGCCCTTTT
GCTCGGGGGATAGGGCTCAAATCAATGGCCTTTGTTGCTGGCCCAGGAAA
CTGCCAACCCCTTTTGAATACTGGTCCCCAAATCCCCCAACCCCCAACCC
CAAAAAAACTTGGGGGGGGCCCCAGGGGGGGGGATAGATTTCTTCCACCG
GGAAAGGGGCCCCTAAACACCCCCCAAAAAAAGGGGCCCAACCCAAAGGG
GGGGGGCGGGTTTTTATACTTTTTAAAAAAAAAAAAAAAATAAATTTTTT
TTTGGTTGTTTCCTCCCCCCCCCCCCCCCCTCTTCAGGAGGGGGGGGGTG
CCTCCTCCCCCACACACACCCCCCAC
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