EY675132

Overview
NameEY675132
Unique NameEY675132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_BORRA (Serine hydroxymethyltransferase OS=Borrelia recurrentis (strain A1) GN=glyA PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.475e-37
Identity = 98/246 (39.84%), Postives = 136/246 (55.28%), Query Frame = 2
Query:  107 VDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            +D  + DLIE+E +R+   IELIASENF S  V +A+GS LTNKY+EG P  RYYGG   +D+IENL  SRA++ F         NVQP+SGS AN AA  ++++P D+I+G++L  GGHLTH      G K+S + +  ++  Y V+  +  IDY+ +   A   R  LII G S+  RE ++ KF+  A +         A   GL +  F   P +   L  +        T  K   GPRGG
Sbjct:    2 IDNILFDLIEREAKRERENIELIASENFVSSDVRQAVGSVLTNKYAEGYPSKRYYGGCSVVDDIENLAISRAMELFGAS----YANVQPHSGSQANMAAIMSLIKPGDKILGMELSHGGHLTH------GSKVSFSGMFFDAYSYGVSRDSEMIDYDDVRNIAKACRPNLIIAGASSYSREIDFKKFREIANEVSAYLLCDIAHTAGLVATGFHNSPIDVAHLTTS--------TTHKTLRGPRGG 229          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_AZOVD (Serine hydroxymethyltransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=glyA PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.475e-37
Identity = 97/250 (38.80%), Postives = 144/250 (57.60%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            +L   D E+   +++E +RQ   IELIASEN+TS AV+EA GS LTNKY+EG PG RYYGG E++D +E L   RA Q F  D      NVQP++GS AN A Y A+++P D ++G+ L  GGHLTH      G  ++ +  +  ++ Y ++++ G+IDY+++E  AL+ + K+I+ G SA  +  ++A+F+  A+K G       A   GL +      P     ++ T        T  K   GPRGG
Sbjct:    7 TLARYDAELFAAMKQEAQRQEDHIELIASENYTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKQLFGAD----YANVQPHAGSQANAAVYQALVKPGDTVLGMSLAHGGHLTH------GASVNFSGKMYNAVQYGIDAN-GFIDYDEVERLALEHKPKMIVAGYSAYSQVLDFARFREIADKVGAYLFVDMAHFAGLVAAGVYPNPVPFADVVTT--------TTHKTLRGPRGG 237          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA2_PSEU2 (Serine hydroxymethyltransferase 2 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=glyA2 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.475e-37
Identity = 97/249 (38.96%), Postives = 140/249 (56.22%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            ++  D  +   +  E++RQ   IELIASEN+TS  V++A GS LTNKY+EG PG RYYGG E +D++E L   RA Q F  D      NVQP+SGS AN A Y A+L+  D ++G+ L  GGHLTH      G K+S +  L  ++ Y ++++TG IDY+++E  A++ + K+II G SA  +  ++ +F+  A+K G       A   GL +      P     ++ T        T  K   GPRGG
Sbjct:    8 IQGYDDALLSAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYPGKRYYGGCEHVDKVEQLAIERARQLFGAD----YANVQPHSGSQANAAVYLALLQAGDTVLGMSLAHGGHLTH------GAKVSFSGKLYNAVQYGIDTATGLIDYDEVERIAVECQPKMIIAGFSAYSKTLDFPRFRAIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTT--------TTHKTLRGPRGG 238          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA2_HAHCH (Serine hydroxymethyltransferase 2 OS=Hahella chejuensis (strain KCTC 2396) GN=glyA2 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.475e-37
Identity = 97/250 (38.80%), Postives = 139/250 (55.60%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            ++ + DP++   ++ E +RQ   IELIASEN+TS  V+EA GSALTNKY+EG P  RYYGG E++D +E L   RA + F  D      NVQP+SGS AN A Y A+ +P D I+G+ L  GGHLTH      G  +S +  + +++ Y +N  TG IDY ++ + A + + K+I+ G SA  R  ++ +F+  A++ G       A   GL +      P     +  T        T  K  GGPRGG
Sbjct:    7 TIASFDPDLWTAMQGETQRQEEHIELIASENYTSPRVMEAQGSALTNKYAEGYPNKRYYGGCEYVDVVEQLAIDRAKELFGAD----YANVQPHSGSQANAAVYMALCKPGDVILGMSLAHGGHLTH------GASVSFSGRIYKAVQYGLNPETGEIDYEEVAKLARENKPKMIVAGFSAYSRVIDWERFRAIADEVGAYLFVDMAHIAGLVAAGVYPSPVQIADVTTT--------TTHKTLGGPRGG 238          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_XANC5 (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=glyA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.926e-37
Identity = 102/247 (41.30%), Postives = 136/247 (55.06%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAG--PGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            LET DPE+   I  E  RQ   +ELIASEN+ S  V+EA GS LTNKY+EG PG RYYGG EF+D  E L   R  Q F  D      NVQP+SGS AN A Y A+L+P D I+G+ L  GGHLTH      G K++ +  L  ++ Y VN   G IDY++++  A + + K+++ G SA  ++ ++A+F+  A+  G           MA +AG       P       +    T K L  GPRGG
Sbjct:    8 LETYDPELAKAIAAEAGRQEDHVELIASENYCSPLVMEAQGSQLTNKYAEGYPGKRYYGGCEFVDIAEQLAIDRIKQVFGAD----YANVQPHSGSQANQAVYLALLQPGDTILGMSLAHGGHLTH------GAKVNVSGKLFYAVQYGVNEQ-GLIDYDEVQRLATEHKPKMVVAGFSAYSQKIDWARFRAIADSVGAYL-----FVDMAHIAGLVAAGVYPSPMEHAHVVTSTTHKTL-RGPRGG 237          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_VESOH (Serine hydroxymethyltransferase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=glyA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.926e-37
Identity = 109/257 (42.41%), Postives = 140/257 (54.47%), Query Frame = 2
Query:   89 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTS-GGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            + +L  VD EI+  I  E+ RQ   IELIASEN+TS AV+E  GS LTNKY+EG P  RYYGG E++D +E L   RA   F  D      NVQP+SGS AN A + A+L P D I+G+ L  GGHLTHG   S  GK  +       S+ Y +N  TG IDY ++E  A  ++ K+II G SA  R  ++ +F+  A+  G        +  MA VAG      L+ TG + P P         T  K   GPRGG
Sbjct:    5 SQTLAKVDAEIYKAIVLEETRQETHIELIASENYTSPAVMETQGSKLTNKYAEGYPCKRYYGGCEYVDMVEQLAIDRAKTLFGAD----YANVQPHSGSQANAAVFQALLVPGDTILGMSLAHGGHLTHGATPSFSGKNFN-------SIQYGLNQKTGEIDYEQVEVLAKRYKPKMIIAGFSAYSRMVDWQRFREIADSVGAYL-----MVDMAHVAG------LIATG-EYPSPVAIADVTTTTTHKTLRGPRGG 238          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_SALTY (Serine hydroxymethyltransferase OS=Salmonella typhimurium GN=glyA PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.926e-37
Identity = 102/242 (42.15%), Postives = 137/242 (56.61%), Query Frame = 2
Query:  110 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQI-PQPPTPKKLGGGPRGG 832
            D E+   +E+EK RQ   IELIASEN+TS  V++A GS LTNKY+EG PG RYYGG E++D +E L   RA + F  D      NVQP+SGS ANFA YTA+L+P D ++G++L  GGHLTH      G  ++ +  L   +PY ++ S G IDY+++ + A + + K+II G SA     ++AK +  A+  G           MA VAG        N  P       T  K   GPRGG
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTH------GSPVNFSGKLYNIVPYGIDES-GKIDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYL-----FVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGG 237          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_SALTI (Serine hydroxymethyltransferase OS=Salmonella typhi GN=glyA PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.926e-37
Identity = 102/242 (42.15%), Postives = 137/242 (56.61%), Query Frame = 2
Query:  110 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQI-PQPPTPKKLGGGPRGG 832
            D E+   +E+EK RQ   IELIASEN+TS  V++A GS LTNKY+EG PG RYYGG E++D +E L   RA + F  D      NVQP+SGS ANFA YTA+L+P D ++G++L  GGHLTH      G  ++ +  L   +PY ++ S G IDY+++ + A + + K+II G SA     ++AK +  A+  G           MA VAG        N  P       T  K   GPRGG
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTH------GSPVNFSGKLYNIVPYGIDES-GKIDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYL-----FVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGG 237          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_SALPK (Serine hydroxymethyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=glyA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.926e-37
Identity = 102/242 (42.15%), Postives = 137/242 (56.61%), Query Frame = 2
Query:  110 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQI-PQPPTPKKLGGGPRGG 832
            D E+   +E+EK RQ   IELIASEN+TS  V++A GS LTNKY+EG PG RYYGG E++D +E L   RA + F  D      NVQP+SGS ANFA YTA+L+P D ++G++L  GGHLTH      G  ++ +  L   +PY ++ S G IDY+++ + A + + K+II G SA     ++AK +  A+  G           MA VAG        N  P       T  K   GPRGG
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTH------GSPVNFSGKLYNIVPYGIDES-GKIDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYL-----FVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGG 237          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_SALPC (Serine hydroxymethyltransferase OS=Salmonella paratyphi C (strain RKS4594) GN=glyA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.926e-37
Identity = 102/242 (42.15%), Postives = 137/242 (56.61%), Query Frame = 2
Query:  110 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQI-PQPPTPKKLGGGPRGG 832
            D E+   +E+EK RQ   IELIASEN+TS  V++A GS LTNKY+EG PG RYYGG E++D +E L   RA + F  D      NVQP+SGS ANFA YTA+L+P D ++G++L  GGHLTH      G  ++ +  L   +PY ++ S G IDY+++ + A + + K+II G SA     ++AK +  A+  G           MA VAG        N  P       T  K   GPRGG
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTH------GSPVNFSGKLYNIVPYGIDES-GKIDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYL-----FVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGG 237          
The following BLAST results are available for this feature:
BLAST of EY675132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_BORRA1.475e-3739.84Serine hydroxymethyltransferase OS=Borrelia recurr... [more]
GLYA_AZOVD1.475e-3738.80Serine hydroxymethyltransferase OS=Azotobacter vin... [more]
GLYA2_PSEU21.475e-3738.96Serine hydroxymethyltransferase 2 OS=Pseudomonas s... [more]
GLYA2_HAHCH1.475e-3738.80Serine hydroxymethyltransferase 2 OS=Hahella cheju... [more]
GLYA_XANC51.926e-3741.30Serine hydroxymethyltransferase OS=Xanthomonas cam... [more]
GLYA_VESOH1.926e-3742.41Serine hydroxymethyltransferase OS=Vesicomyosocius... [more]
GLYA_SALTY1.926e-3742.15Serine hydroxymethyltransferase OS=Salmonella typh... [more]
GLYA_SALTI1.926e-3742.15Serine hydroxymethyltransferase OS=Salmonella typh... [more]
GLYA_SALPK1.926e-3742.15Serine hydroxymethyltransferase OS=Salmonella para... [more]
GLYA_SALPC1.926e-3742.15Serine hydroxymethyltransferase OS=Salmonella para... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-E06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675132 ID=EY675132; Name=EY675132; organism=Citrus sinensis; type=EST; length=1026bp
CACGCGTCCGCATTTTCCCTTTTTTTCCTTTTCAGTGAATCCAGAAAACG
GAAAAAAAGAAAAAATGGATCCAGTGAACGAGTGGGGCAACTCATCTCTT
GAAACCGTGGACCCAGAAATTCACGACCTGATCGAGAAAGAGAAGCGCCG
ACAATGCCGCGGCATCGAGCTCATCGCCTCCGAGAACTTCACCTCCTTCG
CCGTTATCGAAGCCCTCGGCAGCGCCCTCACCAACAAATACTCAGAGGGA
ATGCCCGGCAACCGTTACTACGGAGGCAACGAATTCATCGACGAGATCGA
GAATCTCTGCCGGTCGAGAGCTTTACAAACTTTCCATTTGGACCCCACCC
AGTGGGGTGTCAACGTTCAGCCTTACTCCGGCTCGCCGGCCAACTTCGCC
GCTTACACGGCGGTGCTCGAGCCTCATGACCGTATCATGGGGCTGGACTT
GCCGTCCGGAGGGCATTTGACTCATGGGTATTACACTTCTGGCGGGAAAA
AGATATCGGCGACTTCGATTTTACTCGAGAGCTTGCCGTACAAGGTGAAT
TCGAGTACTGGGTATATTGATTACAATAAGTTGGAGGAGAAAGCGTTGGA
TTTTAGGGCGAAGTTGATCATTTGCGGGGGGAGTGCGTAACCAAGGGAAT
GGGAATATGCCAAATTCCAAACTGGTGCTGAAAAGTGGGGGGGCCCTTTT
GCTCGGGGGATAGGGCTCAAATCAATGGCCTTTGTTGCTGGCCCAGGAAA
CTGCCAACCCCTTTTGAATACTGGTCCCCAAATCCCCCAACCCCCAACCC
CAAAAAAACTTGGGGGGGGCCCCAGGGGGGGGGATAGATTTCTTCCACCG
GGAAAGGGGCCCCTAAACACCCCCCAAAAAAAGGGGCCCAACCCAAAGGG
GGGGGGCGGGTTTTTATACTTTTTAAAAAAAAAAAAAAAATAAATTTTTT
TTTGGTTGTTTCCTCCCCCCCCCCCCCCCCTCTTCAGGAGGGGGGGGGTG
CCTCCTCCCCCACACACACCCCCCAC
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