EY675132

Overview
NameEY675132
Unique NameEY675132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_HYPME (Serine hydroxymethyltransferase OS=Hyphomicrobium methylovorum GN=glyA PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.604e-37
Identity = 99/255 (38.82%), Postives = 140/255 (54.90%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            S +   DP+I   I+KE  RQ   IELIASEN  S AV++A GS LTNKY+EG PG RYYGG +++D +E++   RA + F+ +      NVQP SGS AN   + A+ +P D I+GL L +GGHLTH      G  ++ +    +++ Y V   +  ID +++ + A + + ++II GGSA PR+ ++A F+  A++ G  F     L  MA  AG       L     IP P         T  K   GPRGG
Sbjct:   18 SHVSETDPDIFSAIQKEFGRQQHEIELIASENIVSQAVLDAAGSVLTNKYAEGYPGKRYYGGCQYVDIVEDIAIDRAKKLFNCE----FANVQPNSGSQANQGVFNALAQPGDTILGLSLAAGGHLTH------GAPVNQSGKWFKAVHYMVKPDSHLIDMDEVRKLAQEHKPRIIIAGGSAYPRKIDFAAFRAIADEVGAIF-----LVDMAHFAG-------LVAAGLIPSPFPHAHVVTTTTHKTLRGPRGG 250          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_ENT38 (Serine hydroxymethyltransferase OS=Enterobacter sp. (strain 638) GN=glyA PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.604e-37
Identity = 102/242 (42.15%), Postives = 135/242 (55.79%), Query Frame = 2
Query:  110 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQI-PQPPTPKKLGGGPRGG 832
            D E+   +E+EK RQ   IELIASEN+TS  V++A GS LTNKY+EG PG RYYGG E++D +E L   RA + F  D      NVQP+SGS ANFA YTA+L+P D ++G++L  GGHLTH      G  ++ +  L   +PY ++ S G IDY  + ++A   + K+II G SA     ++AK +  A+  G           MA VAG        N  P       T  K   GPRGG
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTH------GSPVNFSGKLYNIIPYGIDES-GKIDYEDMAKQAETHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYL-----FVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGG 237          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_BIFAA (Serine hydroxymethyltransferase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=glyA PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.604e-37
Identity = 98/256 (38.28%), Postives = 139/256 (54.30%), Query Frame = 2
Query:   77 NEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPF----ARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            N+  N+ +   DPEI ++++ E  RQ  G+E+IASENF   AV++A GS LTNKY+EG PG RYYGG E +D+IE + R RA   F  +      NVQP+SG+ AN A Y A+++P D ++GL L  GGHLTH      G KI+ +     +  Y VN  T  ID   + ++AL+    +II G SA PR  ++   +  A++ G  F    A   GL +      P     ++++        T  K  GGPR G
Sbjct:   11 NDMFNAPIAEADPEIAEILDAELSRQQNGLEMIASENFVPRAVLQAQGSVLTNKYAEGYPGRRYYGGCEQVDKIETIARERAKSLFGAE----YANVQPHSGAQANAAVYQALVKPGDTVLGLALDHGGHLTH------GMKINFSGRFYHAEAYGVNPETFRIDPEIIRQRALETHPAMIIGGWSAYPRIEDFKAMKEIADEVGAKFWVDMAHFAGLVAAGLHPSPVPYADVVSS--------TAHKTLGGPRSG 248          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_BACWK (Serine hydroxymethyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=glyA PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.604e-37
Identity = 98/246 (39.84%), Postives = 138/246 (56.10%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIP-QPPTPKKLGGGPRGG 832
            L+  D ++   IE E  RQ   IELIASENF S AV+EA GS LTNKY+EG PG RYYGG E +D +E++ R RA + F  +     VNVQP+SG+ AN A Y  +LE  D ++G++L  GGHLTH      G  ++ + +    + Y V++ +  I+Y+ +  KA + + KLI+ G SA PR  ++ +F+  A++ G  F     +  MA +AG        N  P       T  K   GPRGG
Sbjct:    4 LKRQDEKVFAAIEAELGRQRSKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGGCEHVDVVEDIARDRAKEIFGAE----HVNVQPHSGAQANMAVYFTILEQGDTVLGMNLSHGGHLTH------GSPVNFSGVQYNFVEYGVDAESHRINYDDVLAKAKEHKPKLIVAGASAYPRVIDFKRFREIADEVGAYF-----MVDMAHIAGLVAAGLHPNPVPHAHFVTTTTHKTLRGPRGG 234          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA3_PSEAE (Serine hydroxymethyltransferase 3 OS=Pseudomonas aeruginosa GN=glyA3 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.604e-37
Identity = 99/250 (39.60%), Postives = 141/250 (56.40%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            +L   D E+   +E+E +RQ   IELIASEN+TS AV+EA GS LTNKY+EG P  RYYGG E++D +E L   RA Q F  D      NVQP++GS AN A Y A+L   D I+G+ L  GGHLTH      G  +S++  L  ++ Y ++++ G IDY+++E  A++ + K+I+ G SA  +  ++A+F+  A+K G       A   GL +      P     ++ T        T  K   GPRGG
Sbjct:    7 TLARYDAELFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYPHKRYYGGCEYVDIVEQLAIDRAKQLFGAD----YANVQPHAGSQANAAVYLALLSAGDTILGMSLAHGGHLTH------GASVSSSGKLYNAVQYGIDAN-GLIDYDEVERLAVEHKPKMIVAGFSAYSQVLDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTT--------TTHKTLRGPRGG 237          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA3_COLP3 (Serine hydroxymethyltransferase 3 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=glyA3 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.604e-37
Identity = 104/260 (40.00%), Postives = 146/260 (56.15%), Query Frame = 2
Query:   74 VNEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGP-QIPQP------PTPKKLGGGPRGG 832
            + ++ +S L + D  +   I+ E+ RQ + IELIASEN  S AV+EA G+ LTNKY+EG PG RYYGG E +D +E L   RA   F  D     VNVQP+SG+ AN A   A+++P D I+G+ L +GGHLTH      G K + +     ++ Y V      IDY+++   A++ + K+II GGSA PR+ ++AKF+  A++ G      I +  MA +AG      L+  G  Q P P       T  K   GPRGG
Sbjct:   10 LEQFFSSDLSSTDGAVQVAIDLEEARQNQQIELIASENIVSKAVMEAQGTVLTNKYAEGYPGRRYYGGCEHVDLVETLAIDRAKLIFKAD----FVNVQPHSGAQANGAVMLALVKPGDTILGMSLDAGGHLTH------GAKPAQSGKWFNAIHYGVRKDDMRIDYDQVLALAIEHQPKMIIAGGSAIPRQIDFAKFREIADQVG-----AILMVDMAHIAG------LVAAGAHQNPLPFADVVTTTTHKTLRGPRGG 248          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_STRMU (Serine hydroxymethyltransferase OS=Streptococcus mutans GN=glyA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 7.319e-37
Identity = 98/246 (39.84%), Postives = 137/246 (55.69%), Query Frame = 2
Query:  101 ETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAG--PGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            E  D E+ + I  E++RQ   IELIASEN  S AV++A GS LTNKY+EG PG RYYGG +++D +E+L   RA + F         NVQP+SGS AN AAY A+++P D +MGLDL +GGHLTH      G  +S +      + Y V+  T  ++Y ++ ++A + + KLI+ G SA     ++ KF+  A++ G        +  MA +AG       P       I    T K L  GPRGG
Sbjct:    9 EEYDREVWEAIHAEEKRQQNNIELIASENVVSKAVMKAQGSILTNKYAEGYPGRRYYGGTDYVDVVESLAIERAKKLFGAK----YANVQPHSGSQANAAAYMALIKPGDTVMGLDLAAGGHLTH------GSPVSFSGQTYNFIAYNVDPETEVLNYEQILKQAEEVQPKLIVAGASAYSHIIDFKKFRDIADQVGAKL-----MVDMAHIAGLVAAGLHPNPLPYAHITTTTTHKTL-RGPRGG 238          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_SHEPA (Serine hydroxymethyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=glyA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 7.319e-37
Identity = 102/242 (42.15%), Postives = 133/242 (54.96%), Query Frame = 2
Query:  110 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQI-PQPPTPKKLGGGPRGG 832
            DP++   IE E RRQ   IELIASEN+ S  VIEA G+ LTNKY+EG PG RYYGG E +D +E L  SRA + F         NVQP+SGS AN A + A+L+  D ++G+ L  GGHLTHG + S   K      L  ++ Y ++ +TG IDY ++E  A++ + K+II G SA     ++ KF+  A+K G           MA VAG        N  P       T  K   GPRGG
Sbjct:   12 DPQLFAAIEDETRRQEEHIELIASENYCSPRVIEAQGTQLTNKYAEGYPGKRYYGGCEHVDIVEELAISRAKELFGAT----YANVQPHSGSQANAAVFMALLQGGDTVLGMSLAHGGHLTHGSHVSFSGK------LYNAVQYGIDETTGQIDYAEVERLAVEHKPKMIIAGFSAYSGIIDWGKFREIADKVGAYL-----FVDMAHVAGLVAAGIYPNPMPHAHVVTTTTHKTLAGPRGG 238          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_ORITB (Serine hydroxymethyltransferase OS=Orientia tsutsugamushi (strain Boryong) GN=glyA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 7.319e-37
Identity = 104/243 (42.80%), Postives = 136/243 (55.97%), Query Frame = 2
Query:  116 EIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWG----GPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            EI+DLI KE  RQ   IELIASENFTS AV+ A GS LTNKY+EG    RYYGG EFIDE+E++   R  + F  +      NVQP+SGS AN A + A+L+P D I+ +DL SGGHLTH      G K + +     ++ Y VN  +  IDYN++E  A   + KLII G SA  R+  +A F+  A+K G       A   GL +  + + P     ++ +        T  K   GPRGG
Sbjct:    4 EIYDLIAKELYRQQSTIELIASENFTSKAVMLAQGSILTNKYAEGYINKRYYGGCEFIDEVESMAIDRVKKLFKCN----YANVQPHSGSQANQAVFLALLKPGDTILAMDLNSGGHLTH------GAKPNISGKFFNAVHYCVNKDSYLIDYNEVEMLAQQHKPKLIIVGYSAYSRKINFATFKEIADKVGAYLLADIAHIAGLVATEYHSSPIPYAHIVTS--------TTHKTLRGPRGG 228          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_MYCGA (Serine hydroxymethyltransferase OS=Mycoplasma gallisepticum GN=glyA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 7.319e-37
Identity = 83/189 (43.92%), Postives = 121/189 (64.02%), Query Frame = 2
Query:  116 EIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAE 682
            EI  LI +E +RQ   IELIASEN+ S AV+ A GS LTNKY+EG P  RYYGG E++D+IE +   +  + F         NVQP+SGS AN AAY A+L+PHD+++ + L  GGHLTH      G K++ +  + +   Y V+ +T  +DY+++ +KA++ + KLI+CG S   R  ++AKF+  A+
Sbjct:    7 EIFKLINQELQRQQDQIELIASENYVSEAVLRATGSVLTNKYAEGTPNKRYYGGCEYVDQIELIAIEKLKKLFGAR----HANVQPHSGSTANAAAYLALLQPHDKVLAMGLNDGGHLTH------GSKVNFSGKIYDFYHYNVDPNTYLLDYDEILKKAIEVKPKLIVCGASNYSRAIDFAKFRQIAD 185          
The following BLAST results are available for this feature:
BLAST of EY675132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_HYPME5.604e-3738.82Serine hydroxymethyltransferase OS=Hyphomicrobium ... [more]
GLYA_ENT385.604e-3742.15Serine hydroxymethyltransferase OS=Enterobacter sp... [more]
GLYA_BIFAA5.604e-3738.28Serine hydroxymethyltransferase OS=Bifidobacterium... [more]
GLYA_BACWK5.604e-3739.84Serine hydroxymethyltransferase OS=Bacillus weihen... [more]
GLYA3_PSEAE5.604e-3739.60Serine hydroxymethyltransferase 3 OS=Pseudomonas a... [more]
GLYA3_COLP35.604e-3740.00Serine hydroxymethyltransferase 3 OS=Colwellia psy... [more]
GLYA_STRMU7.319e-3739.84Serine hydroxymethyltransferase OS=Streptococcus m... [more]
GLYA_SHEPA7.319e-3742.15Serine hydroxymethyltransferase OS=Shewanella peal... [more]
GLYA_ORITB7.319e-3742.80Serine hydroxymethyltransferase OS=Orientia tsutsu... [more]
GLYA_MYCGA7.319e-3743.92Serine hydroxymethyltransferase OS=Mycoplasma gall... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-E06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675132 ID=EY675132; Name=EY675132; organism=Citrus sinensis; type=EST; length=1026bp
CACGCGTCCGCATTTTCCCTTTTTTTCCTTTTCAGTGAATCCAGAAAACG
GAAAAAAAGAAAAAATGGATCCAGTGAACGAGTGGGGCAACTCATCTCTT
GAAACCGTGGACCCAGAAATTCACGACCTGATCGAGAAAGAGAAGCGCCG
ACAATGCCGCGGCATCGAGCTCATCGCCTCCGAGAACTTCACCTCCTTCG
CCGTTATCGAAGCCCTCGGCAGCGCCCTCACCAACAAATACTCAGAGGGA
ATGCCCGGCAACCGTTACTACGGAGGCAACGAATTCATCGACGAGATCGA
GAATCTCTGCCGGTCGAGAGCTTTACAAACTTTCCATTTGGACCCCACCC
AGTGGGGTGTCAACGTTCAGCCTTACTCCGGCTCGCCGGCCAACTTCGCC
GCTTACACGGCGGTGCTCGAGCCTCATGACCGTATCATGGGGCTGGACTT
GCCGTCCGGAGGGCATTTGACTCATGGGTATTACACTTCTGGCGGGAAAA
AGATATCGGCGACTTCGATTTTACTCGAGAGCTTGCCGTACAAGGTGAAT
TCGAGTACTGGGTATATTGATTACAATAAGTTGGAGGAGAAAGCGTTGGA
TTTTAGGGCGAAGTTGATCATTTGCGGGGGGAGTGCGTAACCAAGGGAAT
GGGAATATGCCAAATTCCAAACTGGTGCTGAAAAGTGGGGGGGCCCTTTT
GCTCGGGGGATAGGGCTCAAATCAATGGCCTTTGTTGCTGGCCCAGGAAA
CTGCCAACCCCTTTTGAATACTGGTCCCCAAATCCCCCAACCCCCAACCC
CAAAAAAACTTGGGGGGGGCCCCAGGGGGGGGGATAGATTTCTTCCACCG
GGAAAGGGGCCCCTAAACACCCCCCAAAAAAAGGGGCCCAACCCAAAGGG
GGGGGGCGGGTTTTTATACTTTTTAAAAAAAAAAAAAAAATAAATTTTTT
TTTGGTTGTTTCCTCCCCCCCCCCCCCCCCTCTTCAGGAGGGGGGGGGTG
CCTCCTCCCCCACACACACCCCCCAC
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