EY675132

Overview
NameEY675132
Unique NameEY675132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_DESPS (Serine hydroxymethyltransferase OS=Desulfotalea psychrophila GN=glyA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.799e-43
Identity = 109/248 (43.95%), Postives = 145/248 (58.47%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAG--PGNCQPLLNTGPQIPQPPTPKKLGGGPRG 829
            ++L+  DPEI  LI++E+ RQ   I LIASEN+ S AV+EA GS LTNKYSEG PG RYY G + ID+IE++   RA   F  +     VNVQPYSGSPAN A Y A L+P D I+G+ LP GGHLTH      G K+S +     ++ Y +N   G +DY ++  KAL+ + K++I G SA PR  ++AKF+  A++ G      + +  MA  AG   G   P       +    T K L  GPRG
Sbjct:   11 TALQQQDPEIFSLIQQEEVRQHNKIRLIASENYVSSAVLEATGSILTNKYSEGYPGKRYYEGQQLIDQIESIAIDRAKAVFGAE----HVNVQPYSGSPANMAVYLAFLKPGDTILGMALPHGGHLTH------GSKVSISGKYFNAVSYALNEE-GILDYEEIRNKALECKPKILIAGHSAYPRILDFAKFREIADEVG-----ALLMVDMAHFAGLVAGGVHPSPFPYADVVTTTTHKSL-RGPRG 241          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CAMJR (Serine hydroxymethyltransferase OS=Campylobacter jejuni (strain RM1221) GN=glyA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.799e-43
Identity = 112/246 (45.53%), Postives = 139/246 (56.50%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            SLE  D EI DL  KE  RQC G+E+IASENFT   V+E +GS LTNKY+EG PG RYYGG EF+DEIE L   R  + F+        NVQP SGS AN   Y A++ P D+I+G+DL  GGHLTH      G K+S++  + ES  Y V    G IDY K+ E A   + KLI+CG SA  R  ++AKF+  A++ G      I   +   VAG     P       +    T K L  GPRGG
Sbjct:    2 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCK----FANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTH------GAKVSSSGKMYESCFYGVELD-GRIDYEKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEVGAYLFADIAHIAGLVVAGE---HPSPFPHAHVVSSTTHKTL-RGPRGG 232          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CAMJD (Serine hydroxymethyltransferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=glyA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.799e-43
Identity = 112/246 (45.53%), Postives = 139/246 (56.50%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            SLE  D EI DL  KE  RQC G+E+IASENFT   V+E +GS LTNKY+EG PG RYYGG EF+DEIE L   R  + F+        NVQP SGS AN   Y A++ P D+I+G+DL  GGHLTH      G K+S++  + ES  Y V    G IDY K+ E A   + KLI+CG SA  R  ++AKF+  A++ G      I   +   VAG     P       +    T K L  GPRGG
Sbjct:    2 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCK----FANVQPNSGSQANQGVYAALINPGDKILGMDLTHGGHLTH------GAKVSSSGKMYESCFYGVELD-GRIDYEKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEVGAYLFADIAHIAGLVVAGE---HPSPFPHAHVVSSTTHKTL-RGPRGG 232          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CAMJ8 (Serine hydroxymethyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=glyA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.799e-43
Identity = 112/246 (45.53%), Postives = 139/246 (56.50%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            SLE  D EI DL  KE  RQC G+E+IASENFT   V+E +GS LTNKY+EG PG RYYGG EF+DEIE L   R  + F+        NVQP SGS AN   Y A++ P D+I+G+DL  GGHLTH      G K+S++  + ES  Y V    G IDY K+ E A   + KLI+CG SA  R  ++AKF+  A++ G      I   +   VAG     P       +    T K L  GPRGG
Sbjct:    2 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVIGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCK----FANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTH------GAKVSSSGKMYESCFYGVELD-GRIDYEKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGE---HPSPFPHAHVVSSTTHKTL-RGPRGG 232          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_BACFR (Serine hydroxymethyltransferase OS=Bacteroides fragilis GN=glyA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.799e-43
Identity = 104/245 (42.45%), Postives = 141/245 (57.55%), Query Frame = 2
Query:  110 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            D  I D+IEKE +RQ +GIELIASENF S  V+EA+GS LTNKY+EG PG RYYGG E +D+ E +   R  + F     +W  NVQP+SG+ AN A + AVL P D+ MGL+L  GGHL+H      G  ++ + I+     Y +   TG +DY+++EE AL  + K+II GGSA  REW+Y + +  A+K G       A   GL +   +  P     ++ +        T  K   GPRGG
Sbjct:    4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMEAMGSCLTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRLKEIF---GAEW-ANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLSH------GSLVNTSGIIYTPCEYNLKQETGRVDYDQMEEVALREKPKMIIGGGSAYSREWDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTS--------TTHKTLRGPRGG 230          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_BACFN (Serine hydroxymethyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=glyA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.799e-43
Identity = 104/245 (42.45%), Postives = 141/245 (57.55%), Query Frame = 2
Query:  110 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            D  I D+IEKE +RQ +GIELIASENF S  V+EA+GS LTNKY+EG PG RYYGG E +D+ E +   R  + F     +W  NVQP+SG+ AN A + AVL P D+ MGL+L  GGHL+H      G  ++ + I+     Y +   TG +DY+++EE AL  + K+II GGSA  REW+Y + +  A+K G       A   GL +   +  P     ++ +        T  K   GPRGG
Sbjct:    4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMEAMGSCLTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRLKEIF---GAEW-ANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLSH------GSLVNTSGIIYTPCEYNLKQETGRVDYDQMEEVALREKPKMIIGGGSAYSREWDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTS--------TTHKTLRGPRGG 230          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CHLCH (Serine hydroxymethyltransferase OS=Chlorobium chlorochromatii (strain CaD3) GN=glyA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.349e-43
Identity = 111/253 (43.87%), Postives = 143/253 (56.52%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            L+  D E+   I  E +RQ   +ELIASENFTS AV++A GS +TNKY+EG PG RYYGG EF+D  ENL R RA + F  +     VNVQP+SGS AN A   +VL+P D+IMGLDL  GGHLTH      G  ++ +  + E+  Y V+  TG ID NK+EE A+  R KLII G SA  + +++  F+  A+K        +G   MA +A P      L     +P P         T  K   GPRGG
Sbjct:    6 LQKQDAEVFASIANETKRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFSVLKPGDKIMGLDLSHGGHLTH------GSSVNFSGQMFEAHSYGVDRETGCIDMNKVEEMAMQVRPKLIIGGASAYSQGFDFKAFRAIADK--------VGALLMADIAHPAG----LIAAGLLPNPLQHCHFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CAMJJ (Serine hydroxymethyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=glyA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.349e-43
Identity = 112/246 (45.53%), Postives = 139/246 (56.50%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            SLE  D EI DL  KE  RQC G+E+IASENFT   V+E +GS LTNKY+EG PG RYYGG EF+DEIE L   R  + F+        NVQP SGS AN   Y A++ P D+I+G+DL  GGHLTH      G K+S++  + ES  Y V    G IDY K+ E A   + KLI+CG SA  R  ++AKF+  A++ G      I   +   VAG     P       +    T K L  GPRGG
Sbjct:    2 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIQRCKKLFNCK----FANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTH------GAKVSSSGKMYESCFYGVELD-GRIDYEKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGE---HPSPFPYAHVVSSTTHKTL-RGPRGG 232          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CAMJE (Serine hydroxymethyltransferase OS=Campylobacter jejuni GN=glyA PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 2.349e-43
Identity = 112/246 (45.53%), Postives = 139/246 (56.50%), Query Frame = 2
Query:   95 SLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            SLE  D EI DL  KE  RQC G+E+IASENFT   V+E +GS LTNKY+EG PG RYYGG EF+DEIE L   R  + F+        NVQP SGS AN   Y A++ P D+I+G+DL  GGHLTH      G K+S++  + ES  Y V    G IDY K+ E A   + KLI+CG SA  R  ++AKF+  A++ G      I   +   VAG     P       +    T K L  GPRGG
Sbjct:    2 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCK----FANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTH------GAKVSSSGKMYESCFYGVELD-GRIDYEKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGE---HPSPFPYAHVVSSTTHKTL-RGPRGG 232          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_NITSB (Serine hydroxymethyltransferase OS=Nitratiruptor sp. (strain SB155-2) GN=glyA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 3.068e-43
Identity = 107/253 (42.29%), Postives = 150/253 (59.29%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            L+  DP ++++ EKE +RQ   +E+IASENFTS AV+EA+GS  TNKY+EG PG RYYGG E+ D IE L   RA + F  +     VNVQP+SGS AN   Y A+L+P+D+I+G+DL  GGHLTH      G K++A+  + +S  Y VN   G+IDY+++ + A   + KLI+CG SA PR  ++ KF+  A++ G      + +  +A +AG       L    + P P         T  K   GPRGG
Sbjct:    4 LKNQDPAVYEIFEKELQRQTDHLEMIASENFTSPAVMEAMGSVFTNKYAEGYPGKRYYGGCEYADAIEELAIQRAKELFGCE----FVNVQPHSGSQANQGVYLALLKPYDKILGMDLSHGGHLTH------GAKVNASGKIYQSFFYGVNDE-GWIDYDRVLDIAKIVKPKLIVCGASAYPRVIDFKKFREIADEVG-----ALLMADIAHIAG-------LVAAGEHPSPFPYCDVVTTTTHKTLRGPRGG 233          
The following BLAST results are available for this feature:
BLAST of EY675132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_DESPS1.799e-4343.95Serine hydroxymethyltransferase OS=Desulfotalea ps... [more]
GLYA_CAMJR1.799e-4345.53Serine hydroxymethyltransferase OS=Campylobacter j... [more]
GLYA_CAMJD1.799e-4345.53Serine hydroxymethyltransferase OS=Campylobacter j... [more]
GLYA_CAMJ81.799e-4345.53Serine hydroxymethyltransferase OS=Campylobacter j... [more]
GLYA_BACFR1.799e-4342.45Serine hydroxymethyltransferase OS=Bacteroides fra... [more]
GLYA_BACFN1.799e-4342.45Serine hydroxymethyltransferase OS=Bacteroides fra... [more]
GLYA_CHLCH2.349e-4343.87Serine hydroxymethyltransferase OS=Chlorobium chlo... [more]
GLYA_CAMJJ2.349e-4345.53Serine hydroxymethyltransferase OS=Campylobacter j... [more]
GLYA_CAMJE2.349e-4345.53Serine hydroxymethyltransferase OS=Campylobacter j... [more]
GLYA_NITSB3.068e-4342.29Serine hydroxymethyltransferase OS=Nitratiruptor s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-E06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675132 ID=EY675132; Name=EY675132; organism=Citrus sinensis; type=EST; length=1026bp
CACGCGTCCGCATTTTCCCTTTTTTTCCTTTTCAGTGAATCCAGAAAACG
GAAAAAAAGAAAAAATGGATCCAGTGAACGAGTGGGGCAACTCATCTCTT
GAAACCGTGGACCCAGAAATTCACGACCTGATCGAGAAAGAGAAGCGCCG
ACAATGCCGCGGCATCGAGCTCATCGCCTCCGAGAACTTCACCTCCTTCG
CCGTTATCGAAGCCCTCGGCAGCGCCCTCACCAACAAATACTCAGAGGGA
ATGCCCGGCAACCGTTACTACGGAGGCAACGAATTCATCGACGAGATCGA
GAATCTCTGCCGGTCGAGAGCTTTACAAACTTTCCATTTGGACCCCACCC
AGTGGGGTGTCAACGTTCAGCCTTACTCCGGCTCGCCGGCCAACTTCGCC
GCTTACACGGCGGTGCTCGAGCCTCATGACCGTATCATGGGGCTGGACTT
GCCGTCCGGAGGGCATTTGACTCATGGGTATTACACTTCTGGCGGGAAAA
AGATATCGGCGACTTCGATTTTACTCGAGAGCTTGCCGTACAAGGTGAAT
TCGAGTACTGGGTATATTGATTACAATAAGTTGGAGGAGAAAGCGTTGGA
TTTTAGGGCGAAGTTGATCATTTGCGGGGGGAGTGCGTAACCAAGGGAAT
GGGAATATGCCAAATTCCAAACTGGTGCTGAAAAGTGGGGGGGCCCTTTT
GCTCGGGGGATAGGGCTCAAATCAATGGCCTTTGTTGCTGGCCCAGGAAA
CTGCCAACCCCTTTTGAATACTGGTCCCCAAATCCCCCAACCCCCAACCC
CAAAAAAACTTGGGGGGGGCCCCAGGGGGGGGGATAGATTTCTTCCACCG
GGAAAGGGGCCCCTAAACACCCCCCAAAAAAAGGGGCCCAACCCAAAGGG
GGGGGGCGGGTTTTTATACTTTTTAAAAAAAAAAAAAAAATAAATTTTTT
TTTGGTTGTTTCCTCCCCCCCCCCCCCCCCTCTTCAGGAGGGGGGGGGTG
CCTCCTCCCCCACACACACCCCCCAC
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